RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 NAIPQ13075 1403 aa14.12□□□□□ -0.15
MCM3-201ENST00000229854 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
MCM3-201ENST00000229854 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
MCM3-201ENST00000229854 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
MCM3-201ENST00000229854 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
MCM3-201ENST00000229854 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
MCM3-201ENST00000229854 KIAA0556O60303 1618 aa14.11□□□□□ -0.15
MCM3-201ENST00000229854 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
MCM3-201ENST00000229854 TONSLQ96HA7 1378 aa14.1□□□□□ -0.15
MCM3-201ENST00000229854 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
MCM3-201ENST00000229854 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
MCM3-201ENST00000229854 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
MCM3-201ENST00000229854 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
MCM3-201ENST00000229854 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
MCM3-201ENST00000229854 MIA2Q96PC5 1412 aa14.06□□□□□ -0.16
MCM3-201ENST00000229854 KDM6BO15054 1643 aa14.05□□□□□ -0.16
MCM3-201ENST00000229854 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
MCM3-201ENST00000229854 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
MCM3-201ENST00000229854 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
MCM3-201ENST00000229854 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
MCM3-201ENST00000229854 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
MCM3-201ENST00000229854 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.16
MCM3-201ENST00000229854 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.16
MCM3-201ENST00000229854 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
MCM3-201ENST00000229854 GRIN2AQ12879 1464 aa14.02□□□□□ -0.17
MCM3-201ENST00000229854 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
MCM3-201ENST00000229854 LAS1LQ9Y4W2 734 aaKnown RBP14.01□□□□□ -0.17
MCM3-201ENST00000229854 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
MCM3-201ENST00000229854 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
MCM3-201ENST00000229854 NEFMP07197 916 aa13.99□□□□□ -0.17
MCM3-201ENST00000229854 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
MCM3-201ENST00000229854 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
MCM3-201ENST00000229854 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
MCM3-201ENST00000229854 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
MCM3-201ENST00000229854 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
MCM3-201ENST00000229854 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.18
MCM3-201ENST00000229854 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.18
MCM3-201ENST00000229854 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
MCM3-201ENST00000229854 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
MCM3-201ENST00000229854 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
MCM3-201ENST00000229854 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
MCM3-201ENST00000229854 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
MCM3-201ENST00000229854 DAPK1P53355 1430 aa13.92□□□□□ -0.18
MCM3-201ENST00000229854 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
MCM3-201ENST00000229854 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
MCM3-201ENST00000229854 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
MCM3-201ENST00000229854 NUP160Q12769 1436 aa13.9□□□□□ -0.18
MCM3-201ENST00000229854 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
MCM3-201ENST00000229854 ABCC5O15440 1437 aa13.89□□□□□ -0.19
MCM3-201ENST00000229854 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
MCM3-201ENST00000229854 KIF14Q15058 1648 aa13.88□□□□□ -0.19
MCM3-201ENST00000229854 ABCA8O94911 1581 aa13.87□□□□□ -0.19
MCM3-201ENST00000229854 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
MCM3-201ENST00000229854 ADGRL2O95490 1459 aa13.86□□□□□ -0.19
MCM3-201ENST00000229854 CDC42BPAQ5VT25 1732 aa13.86□□□□□ -0.19
MCM3-201ENST00000229854 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
MCM3-201ENST00000229854 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
MCM3-201ENST00000229854 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
MCM3-201ENST00000229854 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
MCM3-201ENST00000229854 RPRD2Q5VT52 1461 aaKnown RBP13.84□□□□□ -0.19
MCM3-201ENST00000229854 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
MCM3-201ENST00000229854 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
MCM3-201ENST00000229854 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
MCM3-201ENST00000229854 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
MCM3-201ENST00000229854 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
MCM3-201ENST00000229854 PLB1Q6P1J6 1458 aa13.82□□□□□ -0.2
MCM3-201ENST00000229854 ANKRD30BQ9BXX2 1392 aa13.82□□□□□ -0.2
MCM3-201ENST00000229854 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
MCM3-201ENST00000229854 PZPP20742 1482 aa13.81□□□□□ -0.2
MCM3-201ENST00000229854 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
MCM3-201ENST00000229854 PDE4AP27815 886 aa13.8□□□□□ -0.2
MCM3-201ENST00000229854 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
MCM3-201ENST00000229854 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
MCM3-201ENST00000229854 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
MCM3-201ENST00000229854 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
MCM3-201ENST00000229854 GSE1Q14687 1217 aa13.79□□□□□ -0.2
MCM3-201ENST00000229854 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
MCM3-201ENST00000229854 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
MCM3-201ENST00000229854 SHANK2Q9UPX8 1470 aa13.78□□□□□ -0.2
MCM3-201ENST00000229854 CCDC7Q96M83 1385 aa13.77□□□□□ -0.2
MCM3-201ENST00000229854 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.21
MCM3-201ENST00000229854 NCOA1Q15788 1441 aa13.77□□□□□ -0.21
MCM3-201ENST00000229854 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.21
MCM3-201ENST00000229854 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.21
MCM3-201ENST00000229854 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
MCM3-201ENST00000229854 RNF123Q5XPI4 1314 aa13.75□□□□□ -0.21
MCM3-201ENST00000229854 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
MCM3-201ENST00000229854 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
MCM3-201ENST00000229854 SHROOM2Q13796 1616 aa13.74□□□□□ -0.21
MCM3-201ENST00000229854 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
MCM3-201ENST00000229854 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
MCM3-201ENST00000229854 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
MCM3-201ENST00000229854 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
MCM3-201ENST00000229854 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
MCM3-201ENST00000229854 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
MCM3-201ENST00000229854 ATP10BO94823 1461 aa13.72□□□□□ -0.21
MCM3-201ENST00000229854 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
MCM3-201ENST00000229854 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
MCM3-201ENST00000229854 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
MCM3-201ENST00000229854 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms