RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
RPS13-201ENST00000228140 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
RPS13-201ENST00000228140 POGZQ7Z3K3 1410 aa16.98■□□□□ 0.31
RPS13-201ENST00000228140 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
RPS13-201ENST00000228140 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
RPS13-201ENST00000228140 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
RPS13-201ENST00000228140 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
RPS13-201ENST00000228140 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
RPS13-201ENST00000228140 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
RPS13-201ENST00000228140 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
RPS13-201ENST00000228140 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
RPS13-201ENST00000228140 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
RPS13-201ENST00000228140 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
RPS13-201ENST00000228140 PTPRMP28827 1452 aa16.92■□□□□ 0.3
RPS13-201ENST00000228140 KDM5CP41229 1560 aa16.91■□□□□ 0.3
RPS13-201ENST00000228140 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
RPS13-201ENST00000228140 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.3
RPS13-201ENST00000228140 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
RPS13-201ENST00000228140 ABCC1P33527 1531 aa16.89■□□□□ 0.29
RPS13-201ENST00000228140 SIGLEC1Q9BZZ2 1709 aa16.88■□□□□ 0.29
RPS13-201ENST00000228140 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
RPS13-201ENST00000228140 ATP10AO60312 1499 aa16.86■□□□□ 0.29
RPS13-201ENST00000228140 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
RPS13-201ENST00000228140 REREQ9P2R6 1566 aa16.84■□□□□ 0.29
RPS13-201ENST00000228140 DIP2CQ9Y2E4 1556 aa16.83■□□□□ 0.28
RPS13-201ENST00000228140 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
RPS13-201ENST00000228140 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
RPS13-201ENST00000228140 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
RPS13-201ENST00000228140 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
RPS13-201ENST00000228140 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
RPS13-201ENST00000228140 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
RPS13-201ENST00000228140 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
RPS13-201ENST00000228140 GPATCH8Q9UKJ3 1502 aaKnown RBP16.79■□□□□ 0.28
RPS13-201ENST00000228140 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
RPS13-201ENST00000228140 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
RPS13-201ENST00000228140 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
RPS13-201ENST00000228140 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
RPS13-201ENST00000228140 SYCP2Q9BX26 1530 aa16.77■□□□□ 0.28
RPS13-201ENST00000228140 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
RPS13-201ENST00000228140 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
RPS13-201ENST00000228140 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
RPS13-201ENST00000228140 AGLP35573 1532 aa16.75■□□□□ 0.27
RPS13-201ENST00000228140 MLECQ14165 292 aa16.74■□□□□ 0.27
RPS13-201ENST00000228140 PREX1Q8TCU6 1659 aa16.74■□□□□ 0.27
RPS13-201ENST00000228140 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
RPS13-201ENST00000228140 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
RPS13-201ENST00000228140 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
RPS13-201ENST00000228140 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
RPS13-201ENST00000228140 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
RPS13-201ENST00000228140 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
RPS13-201ENST00000228140 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
RPS13-201ENST00000228140 ADGBQ8N7X0 1667 aa16.69■□□□□ 0.26
RPS13-201ENST00000228140 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
RPS13-201ENST00000228140 C3P01024 1663 aa16.67■□□□□ 0.26
RPS13-201ENST00000228140 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
RPS13-201ENST00000228140 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
RPS13-201ENST00000228140 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
RPS13-201ENST00000228140 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
RPS13-201ENST00000228140 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
RPS13-201ENST00000228140 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
RPS13-201ENST00000228140 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
RPS13-201ENST00000228140 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPS13-201ENST00000228140 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
RPS13-201ENST00000228140 A2MP01023 1474 aa16.61■□□□□ 0.25
RPS13-201ENST00000228140 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
RPS13-201ENST00000228140 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
RPS13-201ENST00000228140 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
RPS13-201ENST00000228140 MBD5Q9P267 1494 aa16.6■□□□□ 0.25
RPS13-201ENST00000228140 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
RPS13-201ENST00000228140 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
RPS13-201ENST00000228140 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
RPS13-201ENST00000228140 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
RPS13-201ENST00000228140 ARHGEF5Q12774 1597 aa16.58■□□□□ 0.24
RPS13-201ENST00000228140 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
RPS13-201ENST00000228140 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
RPS13-201ENST00000228140 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
RPS13-201ENST00000228140 HSPA2P54652 639 aa16.55■□□□□ 0.24
RPS13-201ENST00000228140 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
RPS13-201ENST00000228140 NPATQ14207 1427 aa16.53■□□□□ 0.24
RPS13-201ENST00000228140 FAM135AQ9P2D6 1515 aa16.52■□□□□ 0.24
RPS13-201ENST00000228140 STRCQ7RTU9 1775 aa16.51■□□□□ 0.23
RPS13-201ENST00000228140 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
RPS13-201ENST00000228140 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RPS13-201ENST00000228140 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
RPS13-201ENST00000228140 ZNF142P52746 1687 aaPredicted RBP16.5■□□□□ 0.23
RPS13-201ENST00000228140 MYO3AQ8NEV4 1616 aa16.49■□□□□ 0.23
RPS13-201ENST00000228140 APLP2Q06481 763 aa16.49■□□□□ 0.23
RPS13-201ENST00000228140 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
RPS13-201ENST00000228140 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
RPS13-201ENST00000228140 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
RPS13-201ENST00000228140 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
RPS13-201ENST00000228140 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
RPS13-201ENST00000228140 GGT6Q6P531 493 aa16.47■□□□□ 0.23
RPS13-201ENST00000228140 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
RPS13-201ENST00000228140 EIF2AK4Q9P2K8 1649 aaKnown RBP16.46■□□□□ 0.23
RPS13-201ENST00000228140 CROCC2H7BZ55 1655 aa16.46■□□□□ 0.23
RPS13-201ENST00000228140 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
RPS13-201ENST00000228140 ZC3H13Q5T200 1668 aaKnown RBP16.45■□□□□ 0.22
RPS13-201ENST00000228140 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
RPS13-201ENST00000228140 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms