RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 NEFLP07196 543 aa24.57■■□□□ 1.52
PRPF19-201ENST00000227524 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
PRPF19-201ENST00000227524 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
PRPF19-201ENST00000227524 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
PRPF19-201ENST00000227524 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
PRPF19-201ENST00000227524 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
PRPF19-201ENST00000227524 PTPRGP23470 1445 aa24.54■■□□□ 1.52
PRPF19-201ENST00000227524 ANP32EQ9BTT0 268 aa24.53■■□□□ 1.52
PRPF19-201ENST00000227524 TROQ12816 1431 aaPredicted RBP24.53■■□□□ 1.52
PRPF19-201ENST00000227524 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
PRPF19-201ENST00000227524 ATP10BO94823 1461 aa24.51■■□□□ 1.51
PRPF19-201ENST00000227524 CDK11AQ9UQ88 783 aaPredicted RBP24.51■■□□□ 1.51
PRPF19-201ENST00000227524 GCC2Q8IWJ2 1684 aa24.49■■□□□ 1.51
PRPF19-201ENST00000227524 ADCY10Q96PN6 1610 aa24.49■■□□□ 1.51
PRPF19-201ENST00000227524 KIF14Q15058 1648 aa24.48■■□□□ 1.51
PRPF19-201ENST00000227524 GPATCH8Q9UKJ3 1502 aaKnown RBP24.38■■□□□ 1.49
PRPF19-201ENST00000227524 DENND4BO75064 1496 aaPredicted RBP24.38■■□□□ 1.49
PRPF19-201ENST00000227524 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
PRPF19-201ENST00000227524 AKNAQ7Z591 1439 aa24.36■■□□□ 1.49
PRPF19-201ENST00000227524 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
PRPF19-201ENST00000227524 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
PRPF19-201ENST00000227524 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
PRPF19-201ENST00000227524 RBM19Q9Y4C8 960 aaKnown RBP24.35■■□□□ 1.49
PRPF19-201ENST00000227524 KDM6BO15054 1643 aa24.35■■□□□ 1.49
PRPF19-201ENST00000227524 ABCC2Q92887 1545 aa24.34■■□□□ 1.49
PRPF19-201ENST00000227524 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.48
PRPF19-201ENST00000227524 DNMT1P26358 1616 aaKnown RBP24.33■■□□□ 1.48
PRPF19-201ENST00000227524 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
PRPF19-201ENST00000227524 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
PRPF19-201ENST00000227524 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
PRPF19-201ENST00000227524 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PRPF19-201ENST00000227524 HNRNPUQ00839 825 aaKnown RBP eCLIP24.3■■□□□ 1.48
PRPF19-201ENST00000227524 ABCC5O15440 1437 aa24.29■■□□□ 1.48
PRPF19-201ENST00000227524 CAMSAP2Q08AD1 1489 aa24.29■■□□□ 1.48
PRPF19-201ENST00000227524 CHIC2Q9UKJ5 165 aa24.29■■□□□ 1.48
PRPF19-201ENST00000227524 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
PRPF19-201ENST00000227524 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
PRPF19-201ENST00000227524 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
PRPF19-201ENST00000227524 UHRF1BP1LA0JNW5 1464 aa24.23■■□□□ 1.47
PRPF19-201ENST00000227524 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
PRPF19-201ENST00000227524 ROCK1Q13464 1354 aa24.21■■□□□ 1.47
PRPF19-201ENST00000227524 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
PRPF19-201ENST00000227524 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
PRPF19-201ENST00000227524 CROCC2H7BZ55 1655 aa24.18■■□□□ 1.46
PRPF19-201ENST00000227524 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
PRPF19-201ENST00000227524 CDC42BPBQ9Y5S2 1711 aa24.17■■□□□ 1.46
PRPF19-201ENST00000227524 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
PRPF19-201ENST00000227524 POLR1AO95602 1720 aaPredicted RBP24.16■■□□□ 1.46
PRPF19-201ENST00000227524 TTC37Q6PGP7 1564 aa24.15■■□□□ 1.46
PRPF19-201ENST00000227524 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
PRPF19-201ENST00000227524 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
PRPF19-201ENST00000227524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.14■■□□□ 1.463e-10■■■■□ 20.3
PRPF19-201ENST00000227524 CCDC7Q96M83 1385 aa24.14■■□□□ 1.45
PRPF19-201ENST00000227524 IRX6P78412 446 aaPredicted RBP24.13■■□□□ 1.45
PRPF19-201ENST00000227524 RPRD2Q5VT52 1461 aaKnown RBP24.12■■□□□ 1.45
PRPF19-201ENST00000227524 ADGBQ8N7X0 1667 aa24.12■■□□□ 1.45
PRPF19-201ENST00000227524 CCDC184Q52MB2 194 aa24.1■■□□□ 1.45
PRPF19-201ENST00000227524 TEX14Q8IWB6 1497 aa24.1■■□□□ 1.45
PRPF19-201ENST00000227524 ADGRL2O95490 1459 aa24.1■■□□□ 1.45
PRPF19-201ENST00000227524 C11orf95C9JLR9 678 aaPredicted RBP24.1■■□□□ 1.45
PRPF19-201ENST00000227524 FOXD1Q16676 465 aa24.09■■□□□ 1.45
PRPF19-201ENST00000227524 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
PRPF19-201ENST00000227524 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
PRPF19-201ENST00000227524 ERICH6BQ5W0A0 696 aa24.09■■□□□ 1.45
PRPF19-201ENST00000227524 PRKRIP1Q9H875 184 aaPredicted RBP24.08■■□□□ 1.45
PRPF19-201ENST00000227524 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
PRPF19-201ENST00000227524 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
PRPF19-201ENST00000227524 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
PRPF19-201ENST00000227524 MSH5O43196 834 aa24.04■■□□□ 1.44
PRPF19-201ENST00000227524 NBPF8Q3BBV2 869 aa24.04■■□□□ 1.44
PRPF19-201ENST00000227524 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
PRPF19-201ENST00000227524 FANCIQ9NVI1 1328 aa24.03■■□□□ 1.44
PRPF19-201ENST00000227524 SPATA31E1Q6ZUB1 1445 aa24.02■■□□□ 1.44
PRPF19-201ENST00000227524 PPP4R2Q9NY27 417 aa24.01■■□□□ 1.43
PRPF19-201ENST00000227524 C9orf84Q5VXU9 1444 aa24■■□□□ 1.43
PRPF19-201ENST00000227524 MRS2Q9HD23 443 aa24■■□□□ 1.43
PRPF19-201ENST00000227524 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
PRPF19-201ENST00000227524 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
PRPF19-201ENST00000227524 HNRNPMP52272 730 aaKnown RBP eCLIP23.99■■□□□ 1.43
PRPF19-201ENST00000227524 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
PRPF19-201ENST00000227524 KIF7Q2M1P5 1343 aa23.98■■□□□ 1.43
PRPF19-201ENST00000227524 ANKRD30AQ9BXX3 1397 aa23.98■■□□□ 1.43
PRPF19-201ENST00000227524 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
PRPF19-201ENST00000227524 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
PRPF19-201ENST00000227524 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
PRPF19-201ENST00000227524 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
PRPF19-201ENST00000227524 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
PRPF19-201ENST00000227524 PLCH2O75038 1416 aa23.94■■□□□ 1.42
PRPF19-201ENST00000227524 SLC4A1APQ9BWU0 796 aaKnown RBP23.93■■□□□ 1.42
PRPF19-201ENST00000227524 WDR7Q9Y4E6 1490 aa23.93■■□□□ 1.42
PRPF19-201ENST00000227524 PZPP20742 1482 aa23.93■■□□□ 1.42
PRPF19-201ENST00000227524 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
PRPF19-201ENST00000227524 ARHGEF12Q9NZN5 1544 aa23.9■■□□□ 1.42
PRPF19-201ENST00000227524 TSPY4P0CV99 314 aa23.9■■□□□ 1.42
PRPF19-201ENST00000227524 TSPY10P0CW01 314 aa23.9■■□□□ 1.42
PRPF19-201ENST00000227524 KIAA1107Q9UPP5 1409 aa23.9■■□□□ 1.42
PRPF19-201ENST00000227524 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
PRPF19-201ENST00000227524 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
PRPF19-201ENST00000227524 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
PRPF19-201ENST00000227524 BCORL1Q5H9F3 1711 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms