RNA–Protein interactions for RNA: ENST00000226004.7

DUSP3-201, Transcript of dual specificity phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP3, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-201ENST00000226004 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
DUSP3-201ENST00000226004 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
DUSP3-201ENST00000226004 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
DUSP3-201ENST00000226004 NOP58Q9Y2X3 529 aaKnown RBP12.58□□□□□ -0.4
DUSP3-201ENST00000226004 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
DUSP3-201ENST00000226004 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
DUSP3-201ENST00000226004 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
DUSP3-201ENST00000226004 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
DUSP3-201ENST00000226004 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
DUSP3-201ENST00000226004 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
DUSP3-201ENST00000226004 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
DUSP3-201ENST00000226004 PRDM2Q13029 1718 aa12.52□□□□□ -0.4
DUSP3-201ENST00000226004 NAIPQ13075 1403 aa12.52□□□□□ -0.4
DUSP3-201ENST00000226004 HFM1A2PYH4 1435 aa12.52□□□□□ -0.41
DUSP3-201ENST00000226004 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
DUSP3-201ENST00000226004 PTPRKQ15262 1439 aa12.51□□□□□ -0.41
DUSP3-201ENST00000226004 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
DUSP3-201ENST00000226004 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
DUSP3-201ENST00000226004 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
DUSP3-201ENST00000226004 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
DUSP3-201ENST00000226004 MAPKBP1O60336 1514 aa12.48□□□□□ -0.41
DUSP3-201ENST00000226004 ZNF608Q9ULD9 1512 aaPredicted RBP12.48□□□□□ -0.41
DUSP3-201ENST00000226004 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
DUSP3-201ENST00000226004 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
DUSP3-201ENST00000226004 MSH5O43196 834 aa12.48□□□□□ -0.41
DUSP3-201ENST00000226004 LAS1LQ9Y4W2 734 aaKnown RBP12.47□□□□□ -0.41
DUSP3-201ENST00000226004 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
DUSP3-201ENST00000226004 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
DUSP3-201ENST00000226004 PTPRGP23470 1445 aa12.46□□□□□ -0.41
DUSP3-201ENST00000226004 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.41
DUSP3-201ENST00000226004 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.41
DUSP3-201ENST00000226004 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
DUSP3-201ENST00000226004 WDR43Q15061 677 aaKnown RBP eCLIP12.45□□□□□ -0.42
DUSP3-201ENST00000226004 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
DUSP3-201ENST00000226004 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
DUSP3-201ENST00000226004 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
DUSP3-201ENST00000226004 CUL7Q14999 1698 aa12.43□□□□□ -0.42
DUSP3-201ENST00000226004 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
DUSP3-201ENST00000226004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
DUSP3-201ENST00000226004 NEFMP07197 916 aa12.43□□□□□ -0.42
DUSP3-201ENST00000226004 USP47Q96K76 1375 aa12.42□□□□□ -0.42
DUSP3-201ENST00000226004 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
DUSP3-201ENST00000226004 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
DUSP3-201ENST00000226004 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
DUSP3-201ENST00000226004 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
DUSP3-201ENST00000226004 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
DUSP3-201ENST00000226004 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
DUSP3-201ENST00000226004 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
DUSP3-201ENST00000226004 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
DUSP3-201ENST00000226004 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
DUSP3-201ENST00000226004 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
DUSP3-201ENST00000226004 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
DUSP3-201ENST00000226004 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
DUSP3-201ENST00000226004 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 DAPK1P53355 1430 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 TMF1P82094 1093 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 GGT6Q6P531 493 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 KIF3BO15066 747 aa12.38□□□□□ -0.43
DUSP3-201ENST00000226004 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
DUSP3-201ENST00000226004 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
DUSP3-201ENST00000226004 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
DUSP3-201ENST00000226004 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
DUSP3-201ENST00000226004 ABCC5O15440 1437 aa12.35□□□□□ -0.43
DUSP3-201ENST00000226004 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
DUSP3-201ENST00000226004 SAFB2Q14151 953 aaKnown RBP eCLIP12.34□□□□□ -0.43
DUSP3-201ENST00000226004 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
DUSP3-201ENST00000226004 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
DUSP3-201ENST00000226004 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
DUSP3-201ENST00000226004 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
DUSP3-201ENST00000226004 AFAP1Q8N556 730 aa12.33□□□□□ -0.44
DUSP3-201ENST00000226004 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
DUSP3-201ENST00000226004 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
DUSP3-201ENST00000226004 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
DUSP3-201ENST00000226004 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
DUSP3-201ENST00000226004 PANK3Q9H999 370 aa12.32□□□□□ -0.44
DUSP3-201ENST00000226004 ANKRD30BQ9BXX2 1392 aa12.32□□□□□ -0.44
DUSP3-201ENST00000226004 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
DUSP3-201ENST00000226004 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
DUSP3-201ENST00000226004 ARXQ96QS3 562 aa12.31□□□□□ -0.44
DUSP3-201ENST00000226004 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
DUSP3-201ENST00000226004 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
DUSP3-201ENST00000226004 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
DUSP3-201ENST00000226004 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
DUSP3-201ENST00000226004 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
DUSP3-201ENST00000226004 RALBP1Q15311 655 aa12.29□□□□□ -0.44
DUSP3-201ENST00000226004 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
DUSP3-201ENST00000226004 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
DUSP3-201ENST00000226004 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
DUSP3-201ENST00000226004 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
DUSP3-201ENST00000226004 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
DUSP3-201ENST00000226004 CFAP43Q8NDM7 1665 aa12.28□□□□□ -0.44
DUSP3-201ENST00000226004 RCAN3Q9UKA8 241 aa12.27□□□□□ -0.44
DUSP3-201ENST00000226004 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.44
DUSP3-201ENST00000226004 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
DUSP3-201ENST00000226004 PLIN1O60240 522 aa12.26□□□□□ -0.45
DUSP3-201ENST00000226004 PODXL2Q9NZ53 605 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms