RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
NDFIP2-201ENST00000218652 FOXD1Q16676 465 aa19.01■□□□□ 0.63
NDFIP2-201ENST00000218652 MCCP23508 829 aa19.01■□□□□ 0.63
NDFIP2-201ENST00000218652 GOLGA2Q08379 1002 aa19■□□□□ 0.63
NDFIP2-201ENST00000218652 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
NDFIP2-201ENST00000218652 GBP4Q96PP9 640 aa18.97■□□□□ 0.63
NDFIP2-201ENST00000218652 TCERG1O14776 1098 aaKnown RBP18.96■□□□□ 0.63
NDFIP2-201ENST00000218652 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
NDFIP2-201ENST00000218652 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
NDFIP2-201ENST00000218652 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
NDFIP2-201ENST00000218652 KIAA2012Q0VF49 1180 aa18.94■□□□□ 0.62
NDFIP2-201ENST00000218652 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
NDFIP2-201ENST00000218652 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
NDFIP2-201ENST00000218652 PKD2Q13563 968 aa18.93■□□□□ 0.62
NDFIP2-201ENST00000218652 ITPRIPQ8IWB1 547 aa18.92■□□□□ 0.62
NDFIP2-201ENST00000218652 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
NDFIP2-201ENST00000218652 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
NDFIP2-201ENST00000218652 STK26Q9P289 416 aa18.92■□□□□ 0.62
NDFIP2-201ENST00000218652 MFAP1P55081 439 aaKnown RBP18.91■□□□□ 0.62
NDFIP2-201ENST00000218652 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
NDFIP2-201ENST00000218652 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
NDFIP2-201ENST00000218652 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.61
NDFIP2-201ENST00000218652 MLECQ14165 292 aa18.89■□□□□ 0.61
NDFIP2-201ENST00000218652 GNL2Q13823 731 aaKnown RBP18.88■□□□□ 0.61
NDFIP2-201ENST00000218652 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
NDFIP2-201ENST00000218652 KANK4Q5T7N3 995 aaPredicted RBP18.88■□□□□ 0.61
NDFIP2-201ENST00000218652 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
NDFIP2-201ENST00000218652 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
NDFIP2-201ENST00000218652 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
NDFIP2-201ENST00000218652 GGT6Q6P531 493 aa18.85■□□□□ 0.61
NDFIP2-201ENST00000218652 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
NDFIP2-201ENST00000218652 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
NDFIP2-201ENST00000218652 CLSTN1O94985 981 aa18.84■□□□□ 0.61
NDFIP2-201ENST00000218652 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
NDFIP2-201ENST00000218652 RALBP1Q15311 655 aa18.81■□□□□ 0.6
NDFIP2-201ENST00000218652 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
NDFIP2-201ENST00000218652 SMC4Q9NTJ3 1288 aa18.81■□□□□ 0.6
NDFIP2-201ENST00000218652 ZNF330Q9Y3S2 320 aaPredicted RBP18.81■□□□□ 0.6
NDFIP2-201ENST00000218652 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
NDFIP2-201ENST00000218652 SYAP1Q96A49 352 aaPredicted RBP18.79■□□□□ 0.6
NDFIP2-201ENST00000218652 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
NDFIP2-201ENST00000218652 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
NDFIP2-201ENST00000218652 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
NDFIP2-201ENST00000218652 SOGA1O94964 1423 aa18.78■□□□□ 0.6
NDFIP2-201ENST00000218652 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
NDFIP2-201ENST00000218652 TRIM6-TRIM34B2RNG4 842 aa18.77■□□□□ 0.6
NDFIP2-201ENST00000218652 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
NDFIP2-201ENST00000218652 PTMSP20962 102 aa18.77■□□□□ 0.59
NDFIP2-201ENST00000218652 L3MBTL2Q969R5 705 aa18.76■□□□□ 0.59
NDFIP2-201ENST00000218652 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
NDFIP2-201ENST00000218652 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
NDFIP2-201ENST00000218652 KANK1Q14678 1352 aa18.75■□□□□ 0.59
NDFIP2-201ENST00000218652 SLC4A10Q6U841 1118 aa18.74■□□□□ 0.59
NDFIP2-201ENST00000218652 FOXD4L5Q5VV16 416 aaPredicted RBP18.74■□□□□ 0.59
NDFIP2-201ENST00000218652 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
NDFIP2-201ENST00000218652 FOXD4L4Q8WXT5 416 aaPredicted RBP18.74■□□□□ 0.59
NDFIP2-201ENST00000218652 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
NDFIP2-201ENST00000218652 TNNT3P45378 269 aaPredicted RBP18.73■□□□□ 0.59
NDFIP2-201ENST00000218652 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
NDFIP2-201ENST00000218652 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
NDFIP2-201ENST00000218652 STK31Q9BXU1 1019 aa18.73■□□□□ 0.59
NDFIP2-201ENST00000218652 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
NDFIP2-201ENST00000218652 NUP155O75694 1391 aa18.71■□□□□ 0.59
NDFIP2-201ENST00000218652 CENPJQ9HC77 1338 aaPredicted RBP18.7■□□□□ 0.58
NDFIP2-201ENST00000218652 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
NDFIP2-201ENST00000218652 HMMRO75330 724 aa18.68■□□□□ 0.58
NDFIP2-201ENST00000218652 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
NDFIP2-201ENST00000218652 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
NDFIP2-201ENST00000218652 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
NDFIP2-201ENST00000218652 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
NDFIP2-201ENST00000218652 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
NDFIP2-201ENST00000218652 PLIN1O60240 522 aa18.67■□□□□ 0.58
NDFIP2-201ENST00000218652 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
NDFIP2-201ENST00000218652 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
NDFIP2-201ENST00000218652 PDE4AP27815 886 aa18.67■□□□□ 0.58
NDFIP2-201ENST00000218652 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
NDFIP2-201ENST00000218652 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
NDFIP2-201ENST00000218652 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
NDFIP2-201ENST00000218652 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
NDFIP2-201ENST00000218652 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
NDFIP2-201ENST00000218652 CSB-PGBD3P0DP91 1061 aa18.65■□□□□ 0.58
NDFIP2-201ENST00000218652 HSP90AA2PQ14568 343 aaPredicted RBP18.65■□□□□ 0.58
NDFIP2-201ENST00000218652 DDX49Q9Y6V7 483 aaKnown RBP18.64■□□□□ 0.57
NDFIP2-201ENST00000218652 PDE4CQ08493 712 aa18.64■□□□□ 0.57
NDFIP2-201ENST00000218652 TPM4P67936 248 aa18.63■□□□□ 0.57
NDFIP2-201ENST00000218652 SPAG9O60271 1321 aaKnown RBP18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 ST18O60284 1047 aa18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 PRKCSHP14314 528 aaPredicted RBP18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 CUX2O14529 1486 aa18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
NDFIP2-201ENST00000218652 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
NDFIP2-201ENST00000218652 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
NDFIP2-201ENST00000218652 GSE1Q14687 1217 aa18.6■□□□□ 0.57
NDFIP2-201ENST00000218652 RASSF8Q8NHQ8 419 aa18.6■□□□□ 0.57
NDFIP2-201ENST00000218652 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
NDFIP2-201ENST00000218652 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
NDFIP2-201ENST00000218652 ST20-MTHFSA0A0A6YYL1 179 aa18.59■□□□□ 0.57
NDFIP2-201ENST00000218652 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
NDFIP2-201ENST00000218652 FAM161AQ3B820 660 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms