RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.32
CSTF1-201ENST00000217109 MAP3K1Q13233 1512 aa13.08□□□□□ -0.32
CSTF1-201ENST00000217109 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
CSTF1-201ENST00000217109 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
CSTF1-201ENST00000217109 NBR1Q14596 966 aa13.06□□□□□ -0.32
CSTF1-201ENST00000217109 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
CSTF1-201ENST00000217109 URB2Q14146 1524 aaKnown RBP13.05□□□□□ -0.32
CSTF1-201ENST00000217109 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
CSTF1-201ENST00000217109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSTF1-201ENST00000217109 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
CSTF1-201ENST00000217109 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
CSTF1-201ENST00000217109 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSTF1-201ENST00000217109 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
CSTF1-201ENST00000217109 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
CSTF1-201ENST00000217109 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
CSTF1-201ENST00000217109 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
CSTF1-201ENST00000217109 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
CSTF1-201ENST00000217109 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
CSTF1-201ENST00000217109 USP47Q96K76 1375 aa13□□□□□ -0.33
CSTF1-201ENST00000217109 PRDM2Q13029 1718 aa13□□□□□ -0.33
CSTF1-201ENST00000217109 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
CSTF1-201ENST00000217109 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
CSTF1-201ENST00000217109 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
CSTF1-201ENST00000217109 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
CSTF1-201ENST00000217109 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CSTF1-201ENST00000217109 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSTF1-201ENST00000217109 CUL7Q14999 1698 aa12.96□□□□□ -0.34
CSTF1-201ENST00000217109 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.34
CSTF1-201ENST00000217109 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
CSTF1-201ENST00000217109 TMF1P82094 1093 aa12.95□□□□□ -0.34
CSTF1-201ENST00000217109 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
CSTF1-201ENST00000217109 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
CSTF1-201ENST00000217109 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CSTF1-201ENST00000217109 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
CSTF1-201ENST00000217109 ANKRD50Q9ULJ7 1429 aa12.93□□□□□ -0.34
CSTF1-201ENST00000217109 PTPRGP23470 1445 aa12.93□□□□□ -0.34
CSTF1-201ENST00000217109 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
CSTF1-201ENST00000217109 DAPK1P53355 1430 aa12.92□□□□□ -0.34
CSTF1-201ENST00000217109 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
CSTF1-201ENST00000217109 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
CSTF1-201ENST00000217109 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
CSTF1-201ENST00000217109 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
CSTF1-201ENST00000217109 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
CSTF1-201ENST00000217109 KTN1Q86UP2 1357 aaKnown RBP12.91□□□□□ -0.34
CSTF1-201ENST00000217109 RALBP1Q15311 655 aa12.91□□□□□ -0.34
CSTF1-201ENST00000217109 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
CSTF1-201ENST00000217109 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
CSTF1-201ENST00000217109 IQGAP2Q13576 1575 aa12.9□□□□□ -0.34
CSTF1-201ENST00000217109 KIF15Q9NS87 1388 aa12.9□□□□□ -0.34
CSTF1-201ENST00000217109 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
CSTF1-201ENST00000217109 HECW1Q76N89 1606 aa12.89□□□□□ -0.35
CSTF1-201ENST00000217109 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
CSTF1-201ENST00000217109 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
CSTF1-201ENST00000217109 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
CSTF1-201ENST00000217109 ABCC5O15440 1437 aa12.88□□□□□ -0.35
CSTF1-201ENST00000217109 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
CSTF1-201ENST00000217109 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 PANK3Q9H999 370 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
CSTF1-201ENST00000217109 PLB1Q6P1J6 1458 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
CSTF1-201ENST00000217109 KIAA0586Q9BVV6 1533 aa12.86□□□□□ -0.35
CSTF1-201ENST00000217109 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
CSTF1-201ENST00000217109 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
CSTF1-201ENST00000217109 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
CSTF1-201ENST00000217109 KIF3BO15066 747 aa12.85□□□□□ -0.35
CSTF1-201ENST00000217109 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
CSTF1-201ENST00000217109 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
CSTF1-201ENST00000217109 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.35
CSTF1-201ENST00000217109 PLIN1O60240 522 aa12.83□□□□□ -0.36
CSTF1-201ENST00000217109 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
CSTF1-201ENST00000217109 GGT6Q6P531 493 aa12.82□□□□□ -0.36
CSTF1-201ENST00000217109 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
CSTF1-201ENST00000217109 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
CSTF1-201ENST00000217109 RGS3P49796 1198 aa12.82□□□□□ -0.36
CSTF1-201ENST00000217109 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
CSTF1-201ENST00000217109 EXOC6Q8TAG9 804 aa12.81□□□□□ -0.36
CSTF1-201ENST00000217109 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
CSTF1-201ENST00000217109 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
CSTF1-201ENST00000217109 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
CSTF1-201ENST00000217109 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSTF1-201ENST00000217109 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
CSTF1-201ENST00000217109 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
CSTF1-201ENST00000217109 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
CSTF1-201ENST00000217109 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
CSTF1-201ENST00000217109 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
CSTF1-201ENST00000217109 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
CSTF1-201ENST00000217109 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
CSTF1-201ENST00000217109 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
CSTF1-201ENST00000217109 NEFMP07197 916 aa12.77□□□□□ -0.37
CSTF1-201ENST00000217109 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
CSTF1-201ENST00000217109 KANK1Q14678 1352 aa12.77□□□□□ -0.37
CSTF1-201ENST00000217109 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
CSTF1-201ENST00000217109 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
CSTF1-201ENST00000217109 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
CSTF1-201ENST00000217109 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-201ENST00000217109 ARID4BQ4LE39 1312 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-201ENST00000217109 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms