RNA–Protein interactions for RNA: ENST00000216361.8

COCH-201, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-201ENST00000216361 RPRD2Q5VT52 1461 aaKnown RBP28.53■■■□□ 2.16
COCH-201ENST00000216361 DAPK1P53355 1430 aa28.51■■■□□ 2.15
COCH-201ENST00000216361 PRKRIP1Q9H875 184 aaPredicted RBP28.5■■■□□ 2.15
COCH-201ENST00000216361 TEX14Q8IWB6 1497 aa28.5■■■□□ 2.15
COCH-201ENST00000216361 IRX6P78412 446 aaPredicted RBP28.5■■■□□ 2.15
COCH-201ENST00000216361 ERICH6BQ5W0A0 696 aa28.5■■■□□ 2.15
COCH-201ENST00000216361 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
COCH-201ENST00000216361 NBPF8Q3BBV2 869 aa28.47■■■□□ 2.15
COCH-201ENST00000216361 ABCC5O15440 1437 aa28.46■■■□□ 2.15
COCH-201ENST00000216361 DNMT1P26358 1616 aaKnown RBP28.46■■■□□ 2.15
COCH-201ENST00000216361 ARID3CA6NKF2 412 aa28.45■■■□□ 2.15
COCH-201ENST00000216361 SPATA31E1Q6ZUB1 1445 aa28.45■■■□□ 2.14
COCH-201ENST00000216361 CDK11AQ9UQ88 783 aaPredicted RBP28.42■■■□□ 2.14
COCH-201ENST00000216361 MSH5O43196 834 aa28.39■■■□□ 2.14
COCH-201ENST00000216361 FANCIQ9NVI1 1328 aa28.39■■■□□ 2.13
COCH-201ENST00000216361 MRS2Q9HD23 443 aa28.38■■■□□ 2.13
COCH-201ENST00000216361 KIF7Q2M1P5 1343 aa28.38■■■□□ 2.13
COCH-201ENST00000216361 PPP4R2Q9NY27 417 aa28.38■■■□□ 2.13
COCH-201ENST00000216361 ZBED9Q6R2W3 1325 aa28.38■■■□□ 2.13
COCH-201ENST00000216361 ZNF644Q9H582 1327 aaPredicted RBP28.37■■■□□ 2.13
COCH-201ENST00000216361 FAM9BQ8IZU0 186 aa28.36■■■□□ 2.13
COCH-201ENST00000216361 NUP153P49790 1475 aaKnown RBP28.36■■■□□ 2.13
COCH-201ENST00000216361 DISP1Q96F81 1524 aa28.35■■■□□ 2.13
COCH-201ENST00000216361 SLC4A1APQ9BWU0 796 aaKnown RBP28.35■■■□□ 2.13
COCH-201ENST00000216361 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
COCH-201ENST00000216361 POLR1AO95602 1720 aaPredicted RBP28.35■■■□□ 2.13
COCH-201ENST00000216361 KIAA0586Q9BVV6 1533 aa28.32■■■□□ 2.12
COCH-201ENST00000216361 MRC2Q9UBG0 1479 aa28.31■■■□□ 2.12
COCH-201ENST00000216361 PZPP20742 1482 aa28.3■■■□□ 2.12
COCH-201ENST00000216361 RAPGEF6Q8TEU7 1601 aa28.28■■■□□ 2.12
COCH-201ENST00000216361 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
COCH-201ENST00000216361 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
COCH-201ENST00000216361 CAMSAP2Q08AD1 1489 aa28.21■■■□□ 2.11
COCH-201ENST00000216361 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
COCH-201ENST00000216361 DHX29Q7Z478 1369 aaKnown RBP28.21■■■□□ 2.11
COCH-201ENST00000216361 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.1
COCH-201ENST00000216361 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
COCH-201ENST00000216361 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
COCH-201ENST00000216361 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
COCH-201ENST00000216361 ADGBQ8N7X0 1667 aa28.16■■■□□ 2.1
COCH-201ENST00000216361 B4GALNT3Q6L9W6 998 aa28.15■■■□□ 2.1
COCH-201ENST00000216361 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
COCH-201ENST00000216361 GRIN2AQ12879 1464 aa28.14■■■□□ 2.1
COCH-201ENST00000216361 GPATCH8Q9UKJ3 1502 aaKnown RBP28.14■■■□□ 2.1
COCH-201ENST00000216361 USP47Q96K76 1375 aa28.14■■■□□ 2.09
COCH-201ENST00000216361 ITSN2Q9NZM3 1697 aa28.13■■■□□ 2.09
COCH-201ENST00000216361 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
COCH-201ENST00000216361 BCORL1Q5H9F3 1711 aa28.13■■■□□ 2.09
COCH-201ENST00000216361 KIF14Q15058 1648 aa28.11■■■□□ 2.09
COCH-201ENST00000216361 ARID4BQ4LE39 1312 aaPredicted RBP28.09■■■□□ 2.09
COCH-201ENST00000216361 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
COCH-201ENST00000216361 ADCY10Q96PN6 1610 aa28.09■■■□□ 2.09
COCH-201ENST00000216361 KDM5CP41229 1560 aa28.08■■■□□ 2.09
COCH-201ENST00000216361 PKD2Q13563 968 aa28.07■■■□□ 2.08
COCH-201ENST00000216361 BCL11AQ9H165 835 aa28.07■■■□□ 2.08
COCH-201ENST00000216361 ANKRD30AQ9BXX3 1397 aa28.05■■■□□ 2.08
COCH-201ENST00000216361 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
COCH-201ENST00000216361 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
COCH-201ENST00000216361 RNF123Q5XPI4 1314 aa28.03■■■□□ 2.08
COCH-201ENST00000216361 ERICH6Q7L0X2 663 aa28.03■■■□□ 2.08
COCH-201ENST00000216361 NUDCQ9Y266 331 aa28.02■■■□□ 2.08
COCH-201ENST00000216361 ZNF326Q5BKZ1 582 aaKnown RBP28.02■■■□□ 2.08
COCH-201ENST00000216361 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.08
COCH-201ENST00000216361 ANKRD50Q9ULJ7 1429 aa28.01■■■□□ 2.07
COCH-201ENST00000216361 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
COCH-201ENST00000216361 RALGAPBQ86X10 1494 aa28■■■□□ 2.07
COCH-201ENST00000216361 ROCK2O75116 1388 aaKnown RBP27.98■■■□□ 2.07
COCH-201ENST00000216361 POLR3GLQ9BT43 218 aa27.97■■■□□ 2.07
COCH-201ENST00000216361 PNISRQ8TF01 805 aaKnown RBP27.95■■■□□ 2.07
COCH-201ENST00000216361 CEP170Q5SW79 1584 aa27.95■■■□□ 2.06
COCH-201ENST00000216361 ARHGEF12Q9NZN5 1544 aa27.94■■■□□ 2.06
COCH-201ENST00000216361 CNGB1Q14028 1251 aaPredicted RBP27.94■■■□□ 2.06
COCH-201ENST00000216361 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
COCH-201ENST00000216361 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
COCH-201ENST00000216361 NUP155O75694 1391 aa27.91■■■□□ 2.06
COCH-201ENST00000216361 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
COCH-201ENST00000216361 CARD11Q9BXL7 1154 aa27.89■■■□□ 2.06
COCH-201ENST00000216361 C9orf84Q5VXU9 1444 aa27.88■■■□□ 2.05
COCH-201ENST00000216361 CDC42BPAQ5VT25 1732 aa27.88■■■□□ 2.05
COCH-201ENST00000216361 KIF15Q9NS87 1388 aa27.88■■■□□ 2.05
COCH-201ENST00000216361 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
COCH-201ENST00000216361 ABCC10Q5T3U5 1492 aa27.88■■■□□ 2.05
COCH-201ENST00000216361 CARMIL2Q6F5E8 1435 aa27.87■■■□□ 2.05
COCH-201ENST00000216361 TMC1Q8TDI8 760 aa27.86■■■□□ 2.05
COCH-201ENST00000216361 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
COCH-201ENST00000216361 LRPPRCP42704 1394 aaKnown RBP27.85■■■□□ 2.05
COCH-201ENST00000216361 CCDC136Q96JN2 1154 aa27.83■■■□□ 2.05
COCH-201ENST00000216361 PTPRGP23470 1445 aa27.83■■■□□ 2.04
COCH-201ENST00000216361 KTN1Q86UP2 1357 aaKnown RBP27.82■■■□□ 2.04
COCH-201ENST00000216361 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
COCH-201ENST00000216361 BRD4O60885 1362 aaPredicted RBP27.81■■■□□ 2.04
COCH-201ENST00000216361 ST20-MTHFSA0A0A6YYL1 179 aa27.81■■■□□ 2.04
COCH-201ENST00000216361 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
COCH-201ENST00000216361 NUP160Q12769 1436 aa27.81■■■□□ 2.04
COCH-201ENST00000216361 ABCA8O94911 1581 aa27.8■■■□□ 2.04
COCH-201ENST00000216361 MYBBP1AQ9BQG0 1328 aaKnown RBP27.79■■■□□ 2.04
COCH-201ENST00000216361 RALBP1Q15311 655 aa27.78■■■□□ 2.04
COCH-201ENST00000216361 MYT1LQ9UL68 1186 aa27.78■■■□□ 2.04
COCH-201ENST00000216361 ATP10BO94823 1461 aa27.77■■■□□ 2.04
COCH-201ENST00000216361 E9PCH4 1651 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms