RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
DNMT3B-201ENST00000201963 GLIPR1L2Q4G1C9 344 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 SPAG9O60271 1321 aaKnown RBP15.34■□□□□ 0.05
DNMT3B-201ENST00000201963 WDR62O43379 1518 aa15.33■□□□□ 0.05
DNMT3B-201ENST00000201963 RAPGEF3O95398 923 aa15.32■□□□□ 0.04
DNMT3B-201ENST00000201963 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
DNMT3B-201ENST00000201963 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
DNMT3B-201ENST00000201963 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
DNMT3B-201ENST00000201963 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
DNMT3B-201ENST00000201963 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
DNMT3B-201ENST00000201963 PRXQ9BXM0 1461 aa15.27■□□□□ 0.04
DNMT3B-201ENST00000201963 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
DNMT3B-201ENST00000201963 DDRGK1Q96HY6 314 aa15.26■□□□□ 0.03
DNMT3B-201ENST00000201963 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
DNMT3B-201ENST00000201963 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
DNMT3B-201ENST00000201963 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 UACAQ9BZF9 1416 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 FOXD1Q16676 465 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 ARHGAP35Q9NRY4 1499 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
DNMT3B-201ENST00000201963 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
DNMT3B-201ENST00000201963 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
DNMT3B-201ENST00000201963 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
DNMT3B-201ENST00000201963 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
DNMT3B-201ENST00000201963 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 ANP32BQ92688 251 aaKnown RBP15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
DNMT3B-201ENST00000201963 KANK1Q14678 1352 aa15.15■□□□□ 0.02
DNMT3B-201ENST00000201963 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.02
DNMT3B-201ENST00000201963 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
DNMT3B-201ENST00000201963 RGS3P49796 1198 aa15.13■□□□□ 0.01
DNMT3B-201ENST00000201963 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
DNMT3B-201ENST00000201963 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
DNMT3B-201ENST00000201963 PKD2Q13563 968 aa15.11■□□□□ 0.01
DNMT3B-201ENST00000201963 NUP155O75694 1391 aa15.11■□□□□ 0.01
DNMT3B-201ENST00000201963 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 CDK13Q14004 1512 aaKnown RBP15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 BECN1Q14457 450 aa15.09■□□□□ 0.01
DNMT3B-201ENST00000201963 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0.01
DNMT3B-201ENST00000201963 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0
DNMT3B-201ENST00000201963 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 CUL7Q14999 1698 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 SCAPERQ9BY12 1400 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 ZBTB7CA1YPR0 619 aa15.07■□□□□ 0
DNMT3B-201ENST00000201963 KIF21BO75037 1637 aa15.07■□□□□ 0
DNMT3B-201ENST00000201963 STK26Q9P289 416 aa15.06■□□□□ 0
DNMT3B-201ENST00000201963 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
DNMT3B-201ENST00000201963 ADAMTS12P58397 1594 aa15.04■□□□□ -0
DNMT3B-201ENST00000201963 TRIM44Q96DX7 344 aaPredicted RBP15.04■□□□□ -0
DNMT3B-201ENST00000201963 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
DNMT3B-201ENST00000201963 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
DNMT3B-201ENST00000201963 ASXL2Q76L83 1435 aa15.02■□□□□ -0
DNMT3B-201ENST00000201963 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
DNMT3B-201ENST00000201963 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
DNMT3B-201ENST00000201963 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 SLC24A1O60721 1099 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 ARHGEF11O15085 1522 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 POGKQ9P215 609 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 NUDCQ9Y266 331 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 NUP160Q12769 1436 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 A0A0G2JS52 829 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
DNMT3B-201ENST00000201963 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
DNMT3B-201ENST00000201963 MSH5O43196 834 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
DNMT3B-201ENST00000201963 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
DNMT3B-201ENST00000201963 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 ATP10BO94823 1461 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms