RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DAPK1P53355 1430 aa29.21■■■□□ 2.27
TNFRSF1A-201ENST00000162749 NAIPQ13075 1403 aa29.19■■■□□ 2.26
TNFRSF1A-201ENST00000162749 ABCC5O15440 1437 aa29.18■■■□□ 2.26
TNFRSF1A-201ENST00000162749 MYO5CQ9NQX4 1742 aa29.18■■■□□ 2.26
TNFRSF1A-201ENST00000162749 GCC2Q8IWJ2 1684 aa29.18■■■□□ 2.26
TNFRSF1A-201ENST00000162749 ZNF777Q9ULD5 760 aaPredicted RBP29.16■■■□□ 2.26
TNFRSF1A-201ENST00000162749 AKNAQ7Z591 1439 aa29.16■■■□□ 2.26
TNFRSF1A-201ENST00000162749 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
TNFRSF1A-201ENST00000162749 CHIC2Q9UKJ5 165 aa29.15■■■□□ 2.26
TNFRSF1A-201ENST00000162749 KCNH8Q96L42 1107 aa29.13■■■□□ 2.25
TNFRSF1A-201ENST00000162749 CLSPNQ9HAW4 1339 aa29.12■■■□□ 2.25
TNFRSF1A-201ENST00000162749 WDR7Q9Y4E6 1490 aa29.12■■■□□ 2.25
TNFRSF1A-201ENST00000162749 SAMD9LQ8IVG5 1584 aa29.1■■■□□ 2.25
TNFRSF1A-201ENST00000162749 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
TNFRSF1A-201ENST00000162749 ADGBQ8N7X0 1667 aa29.08■■■□□ 2.25
TNFRSF1A-201ENST00000162749 ROCK1Q13464 1354 aa29.08■■■□□ 2.25
TNFRSF1A-201ENST00000162749 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
TNFRSF1A-201ENST00000162749 RIMBP3CA6NJZ7 1639 aa29.04■■■□□ 2.24
TNFRSF1A-201ENST00000162749 RIMBP3BA6NNM3 1639 aa29.04■■■□□ 2.24
TNFRSF1A-201ENST00000162749 RIMBP3Q9UFD9 1639 aa29.04■■■□□ 2.24
TNFRSF1A-201ENST00000162749 ASXL2Q76L83 1435 aa29.04■■■□□ 2.24
TNFRSF1A-201ENST00000162749 MAPKBP1O60336 1514 aa29.03■■■□□ 2.24
TNFRSF1A-201ENST00000162749 ARHGEF5Q12774 1597 aa29.03■■■□□ 2.24
TNFRSF1A-201ENST00000162749 KDM6BO15054 1643 aa29.02■■■□□ 2.24
TNFRSF1A-201ENST00000162749 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
TNFRSF1A-201ENST00000162749 PLCH2O75038 1416 aa29■■■□□ 2.23
TNFRSF1A-201ENST00000162749 ADGRL2O95490 1459 aa28.99■■■□□ 2.23
TNFRSF1A-201ENST00000162749 SHANK2Q9UPX8 1470 aa28.99■■■□□ 2.23
TNFRSF1A-201ENST00000162749 ABCA9Q8IUA7 1624 aa28.99■■■□□ 2.23
TNFRSF1A-201ENST00000162749 NPM1P06748 294 aaKnown RBP eCLIP28.97■■■□□ 2.23
TNFRSF1A-201ENST00000162749 NCOA1Q15788 1441 aa28.96■■■□□ 2.23
TNFRSF1A-201ENST00000162749 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
TNFRSF1A-201ENST00000162749 ARAP3Q8WWN8 1544 aa28.95■■■□□ 2.22
TNFRSF1A-201ENST00000162749 HNRNPMP52272 730 aaKnown RBP eCLIP28.94■■■□□ 2.22
TNFRSF1A-201ENST00000162749 CCDC141Q6ZP82 1450 aa28.93■■■□□ 2.22
TNFRSF1A-201ENST00000162749 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
TNFRSF1A-201ENST00000162749 PLEKHH2Q8IVE3 1493 aa28.91■■■□□ 2.22
TNFRSF1A-201ENST00000162749 KIAA1107Q9UPP5 1409 aa28.9■■■□□ 2.22
TNFRSF1A-201ENST00000162749 ANKRD30AQ9BXX3 1397 aa28.88■■■□□ 2.21
TNFRSF1A-201ENST00000162749 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
TNFRSF1A-201ENST00000162749 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
TNFRSF1A-201ENST00000162749 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
TNFRSF1A-201ENST00000162749 ABCC1P33527 1531 aa28.87■■■□□ 2.21
TNFRSF1A-201ENST00000162749 TSPY4P0CV99 314 aa28.86■■■□□ 2.21
TNFRSF1A-201ENST00000162749 TSPY10P0CW01 314 aa28.86■■■□□ 2.21
TNFRSF1A-201ENST00000162749 ARHGEF12Q9NZN5 1544 aa28.86■■■□□ 2.21
TNFRSF1A-201ENST00000162749 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
TNFRSF1A-201ENST00000162749 FANCAO15360 1455 aa28.79■■■□□ 2.2
TNFRSF1A-201ENST00000162749 DENND4BO75064 1496 aaPredicted RBP28.77■■■□□ 2.2
TNFRSF1A-201ENST00000162749 ANKRD50Q9ULJ7 1429 aa28.77■■■□□ 2.2
TNFRSF1A-201ENST00000162749 ACIN1Q9UKV3 1341 aaKnown RBP28.77■■■□□ 2.2
TNFRSF1A-201ENST00000162749 TRIM52Q96A61 297 aa28.77■■■□□ 2.2
TNFRSF1A-201ENST00000162749 KIF15Q9NS87 1388 aa28.75■■■□□ 2.19
TNFRSF1A-201ENST00000162749 PLXNC1O60486 1568 aa28.73■■■□□ 2.19
TNFRSF1A-201ENST00000162749 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
TNFRSF1A-201ENST00000162749 SIN3AQ96ST3 1273 aa28.7■■■□□ 2.19
TNFRSF1A-201ENST00000162749 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
TNFRSF1A-201ENST00000162749 MPHOSPH9Q99550 1183 aa28.69■■■□□ 2.18
TNFRSF1A-201ENST00000162749 ADGRL1O94910 1474 aa28.67■■■□□ 2.18
TNFRSF1A-201ENST00000162749 CFAP74Q9C0B2 1584 aa28.65■■■□□ 2.18
TNFRSF1A-201ENST00000162749 PZPP20742 1482 aa28.64■■■□□ 2.17
TNFRSF1A-201ENST00000162749 NEUROD1Q13562 356 aa28.63■■■□□ 2.17
TNFRSF1A-201ENST00000162749 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
TNFRSF1A-201ENST00000162749 SCAPERQ9BY12 1400 aa28.61■■■□□ 2.17
TNFRSF1A-201ENST00000162749 MAP3K4Q9Y6R4 1608 aa28.61■■■□□ 2.17
TNFRSF1A-201ENST00000162749 AFAP1Q8N556 730 aa28.61■■■□□ 2.17
TNFRSF1A-201ENST00000162749 DUOX2Q9NRD8 1548 aa28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 GLI2P10070 1586 aa28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 RTEL1-TNFRSF6BF6WH68 1400 aa28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 KDM5DQ9BY66 1539 aa28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 SLC4A1APQ9BWU0 796 aaKnown RBP28.58■■■□□ 2.17
TNFRSF1A-201ENST00000162749 SPAG9O60271 1321 aaKnown RBP28.56■■■□□ 2.16
TNFRSF1A-201ENST00000162749 TIMELESSQ9UNS1 1208 aa28.55■■■□□ 2.16
TNFRSF1A-201ENST00000162749 DIP2BQ9P265 1576 aa28.54■■■□□ 2.16
TNFRSF1A-201ENST00000162749 ATP7AQ04656 1500 aa28.54■■■□□ 2.16
TNFRSF1A-201ENST00000162749 FOXD1Q16676 465 aa28.54■■■□□ 2.16
TNFRSF1A-201ENST00000162749 UNC13BO14795 1591 aa28.52■■■□□ 2.16
TNFRSF1A-201ENST00000162749 NUP155O75694 1391 aa28.52■■■□□ 2.16
TNFRSF1A-201ENST00000162749 ERBINQ96RT1 1412 aa28.52■■■□□ 2.16
TNFRSF1A-201ENST00000162749 ZNF518AQ6AHZ1 1483 aa28.5■■■□□ 2.15
TNFRSF1A-201ENST00000162749 NEO1Q92859 1461 aa28.5■■■□□ 2.15
TNFRSF1A-201ENST00000162749 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
TNFRSF1A-201ENST00000162749 KIDINS220Q9ULH0 1771 aa28.48■■■□□ 2.15
TNFRSF1A-201ENST00000162749 KDM5CP41229 1560 aa28.46■■■□□ 2.15
TNFRSF1A-201ENST00000162749 POGZQ7Z3K3 1410 aa28.46■■■□□ 2.15
TNFRSF1A-201ENST00000162749 TONSLQ96HA7 1378 aa28.46■■■□□ 2.15
TNFRSF1A-201ENST00000162749 FAM135AQ9P2D6 1515 aa28.44■■■□□ 2.14
TNFRSF1A-201ENST00000162749 MAGI2Q86UL8 1455 aa28.43■■■□□ 2.14
TNFRSF1A-201ENST00000162749 PKD2Q13563 968 aa28.43■■■□□ 2.14
TNFRSF1A-201ENST00000162749 FAM69CQ0P6D2 419 aa28.42■■■□□ 2.14
TNFRSF1A-201ENST00000162749 IQGAP3Q86VI3 1631 aa28.42■■■□□ 2.14
TNFRSF1A-201ENST00000162749 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
TNFRSF1A-201ENST00000162749 ZNF316A6NFI3 1004 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF1A-201ENST00000162749 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
TNFRSF1A-201ENST00000162749 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.13
TNFRSF1A-201ENST00000162749 PPRC1Q5VV67 1664 aaKnown RBP28.38■■■□□ 2.13
TNFRSF1A-201ENST00000162749 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
TNFRSF1A-201ENST00000162749 PPP1R15AO75807 674 aaPredicted RBP28.38■■■□□ 2.13
TNFRSF1A-201ENST00000162749 RICTORQ6R327 1708 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms