RNA–Protein interactions for RNA: ENSMUST00000178577.1

Gm2888-202, Transcript of Predicted gene 2888, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Gm2888, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm2888-202ENSMUST00000178577 Rtl1Q7M732 1744 aa13.02□□□□□ -0.32
Gm2888-202ENSMUST00000178577 Adnp2Q8CHC8 1165 aaKnown RBP13.02□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Skap1Q3UUV5 355 aa13□□□□□ -0.33
Gm2888-202ENSMUST00000178577 1700006A11RikB9EHI3 544 aa12.99□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Phldb1Q6PDH0 1371 aaKnown RBP12.98□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Map4k4P97820 1233 aaKnown RBP12.98□□□□□ -0.33
Gm2888-202ENSMUST00000178577 P3h3Q8CG70 732 aa12.98□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Pelp1Q9DBD5 1123 aaKnown RBP12.98□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Sptlc1O35704 473 aa12.97□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Onecut3Q8K557 490 aa12.96□□□□□ -0.33
Gm2888-202ENSMUST00000178577 Kdm2aP59997 1161 aa12.95□□□□□ -0.34
Gm2888-202ENSMUST00000178577 Neurod1Q60867 357 aa12.95□□□□□ -0.34
Gm2888-202ENSMUST00000178577 Lce6aD3YV94 81 aa12.94□□□□□ -0.34
Gm2888-202ENSMUST00000178577 Lrrc14bQ3UJB3 510 aa12.91□□□□□ -0.34
Gm2888-202ENSMUST00000178577 Baz1bQ9Z277 1479 aa12.9□□□□□ -0.34
Gm2888-202ENSMUST00000178577 GcgrQ61606 485 aa12.88□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Pcdhb20Q91XZ9 799 aa12.88□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Speer2E9Q9U2 264 aa12.87□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Ubl4bQ9CQ84 188 aa12.87□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Pcdh10E9PXQ7 1057 aa12.86□□□□□ -0.35
Gm2888-202ENSMUST00000178577 ElnP54320 860 aa12.86□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Unc13aQ4KUS2 1712 aa12.85□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Hoxa2P31245 372 aa12.85□□□□□ -0.35
Gm2888-202ENSMUST00000178577 Zeb1Q64318 1117 aa12.83□□□□□ -0.36
Gm2888-202ENSMUST00000178577 Mrc2Q64449 1479 aa12.82□□□□□ -0.36
Gm2888-202ENSMUST00000178577 Skiv2lQ6NZR5 1244 aa12.81□□□□□ -0.36
Gm2888-202ENSMUST00000178577 Inpp5dQ9ES52 1191 aa12.8□□□□□ -0.36
Gm2888-202ENSMUST00000178577 Sall2Q9QX96 1004 aa12.77□□□□□ -0.37
Gm2888-202ENSMUST00000178577 Pdia6Q922R8 440 aaKnown RBP12.75□□□□□ -0.37
Gm2888-202ENSMUST00000178577 CftrP26361 1476 aa12.74□□□□□ -0.37
Gm2888-202ENSMUST00000178577 ZyxQ62523 564 aa12.74□□□□□ -0.37
Gm2888-202ENSMUST00000178577 Eya1P97767 591 aa12.73□□□□□ -0.37
Gm2888-202ENSMUST00000178577 IncenpQ9WU62 880 aa12.73□□□□□ -0.37
Gm2888-202ENSMUST00000178577 Thap8E9Q695 213 aa12.71□□□□□ -0.37
Gm2888-202ENSMUST00000178577 Smpd1Q04519 627 aa12.71□□□□□ -0.37
Gm2888-202ENSMUST00000178577 Synj1Q8CHC4 1574 aa12.69□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Crim1Q9JLL0 1037 aa12.69□□□□□ -0.38
Gm2888-202ENSMUST00000178577 JmyQ9QXM1 983 aa12.68□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Cttnbp2B9EJA2 1648 aa12.68□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Gpr37l1Q99JG2 481 aa12.67□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Lhx6Q9R1R0 363 aa12.66□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Fmr1nbQ80ZA7 238 aa12.65□□□□□ -0.38
Gm2888-202ENSMUST00000178577 Pdcd7Q9WTY1 482 aa12.64□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Ffar3Q3UFD7 319 aa12.63□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Dnajc5gQ8C632 165 aa12.63□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Mkrn3Q60764 544 aa12.62□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Setdb2Q8C267 713 aa12.62□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Pbx2O35984 430 aa12.61□□□□□ -0.39
Gm2888-202ENSMUST00000178577 LipiF6YQT7 476 aa12.6□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Ddx11Q6AXC6 880 aa12.59□□□□□ -0.39
Gm2888-202ENSMUST00000178577 RragcQ99K70 398 aa12.59□□□□□ -0.39
Gm2888-202ENSMUST00000178577 Ccdc136Q3TVA9 1136 aa12.58□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Cnksr2Q80YA9 1032 aa12.58□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Brd4Q9ESU6 1400 aaKnown RBP12.58□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Masp1P98064 704 aa12.57□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Slc12a5Q91V14 1138 aa12.57□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Lrriq1Q0P5X1 1673 aa12.57□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Klra4Q60651 263 aa12.55□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Gm11939A2A592 99 aa12.54□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Cux2P70298 1426 aa12.53□□□□□ -0.4
Gm2888-202ENSMUST00000178577 Lrfn2Q80TG9 788 aa12.52□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Gm13695A2AK44 830 aa12.51□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Prrt3Q6PE13 971 aa12.5□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Rsf1E9PWW9 1441 aaKnown RBP12.49□□□□□ -0.41
Gm2888-202ENSMUST00000178577 ChgaP26339 463 aaKnown RBP12.49□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Kif21aQ9QXL2 1672 aa12.48□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Znf354bQ9QXT9 601 aa12.48□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Kif15Q6P9L6 1387 aa12.47□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Myt1lP97500 1187 aa12.47□□□□□ -0.41
Gm2888-202ENSMUST00000178577 OscarQ8VBT3 265 aa12.46□□□□□ -0.41
Gm2888-202ENSMUST00000178577 Rnf166Q3U9F6 237 aa12.45□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Esf1Q3V1V3 845 aaKnown RBP12.42□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Ric3Q8BPM6 367 aa12.42□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Pde8bE9Q4S1 865 aa12.41□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Mllt6B1AR10 1109 aa12.4□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Gabbr2Q80T41 940 aa12.4□□□□□ -0.42
Gm2888-202ENSMUST00000178577 Lamc3Q9R0B6 1581 aa12.39□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Gm11563B1AQ90 168 aa12.38□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Krtap4-7Q9D732 168 aa12.38□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Eif4g3Q80XI3 1579 aaKnown RBP12.37□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Plekhg3Q4VAC9 1341 aa12.37□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Erbb3Q61526 1339 aa12.37□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Shroom2A2ALU4 1481 aa12.35□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Emid1Q91VF5 444 aa12.34□□□□□ -0.43
Gm2888-202ENSMUST00000178577 Npm1Q61937 292 aaKnown RBP12.33□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Myt1Q8CFC2 1127 aa12.33□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Unc5aQ8K1S4 898 aa12.33□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Rem2Q8VEL9 341 aa12.33□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Urb2E9Q7L1 1524 aaKnown RBP12.3□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Top2bQ64511 1612 aa12.29□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Foxd4Q60688 444 aa12.29□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Tmc3Q7TQ69 1130 aa12.28□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Cep164Q5DU05 1446 aa12.28□□□□□ -0.44
Gm2888-202ENSMUST00000178577 Farp1F8VPU2 1048 aa12.27□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Slc7a3P70423 618 aa12.27□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Ints3Q7TPD0 1041 aaKnown RBP12.27□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Plb1Q3TTY0 1478 aa12.27□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Nudt12Q9DCN1 462 aa12.26□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Irx6Q9ER75 438 aa12.25□□□□□ -0.45
Gm2888-202ENSMUST00000178577 Dhx29Q6PGC1 1365 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms