RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Pprc1Q6NZN1 1644 aa22.03■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Shroom2A2ALU4 1481 aa22.01■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Adcy10Q8C0T9 1614 aa22■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Kiaa1551Q5DTW7 1521 aa21.99■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Hnrnpul2Q00PI9 745 aaKnown RBP21.98■■□□□ 1.11
Sdc1-205ENSMUST00000171158 SphkapQ6NSW3 1687 aa21.98■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Stra8P70278 393 aa21.98■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Sin3aQ60520 1274 aaKnown RBP21.98■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Lamc1P02468 1607 aaKnown RBP21.97■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Rprd2Q6NXI6 1469 aaKnown RBP21.96■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Znf710Q3U288 666 aa21.96■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Cc2d2bA0A286YDU8 1405 aa21.96■■□□□ 1.11
Sdc1-205ENSMUST00000171158 Kif21bQ9QXL1 1668 aa21.95■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Kdm3bQ6ZPY7 1562 aa21.95■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Arhgap27A2AB59 869 aa21.95■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Lrriq1Q0P5X1 1673 aa21.94■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Smg6P61406 1418 aaKnown RBP21.94■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Mtus2Q3UHD3 1353 aa21.93■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Zfp644E9QA22 1323 aa21.93■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Usp47Q8BY87 1376 aa21.92■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Il16O54824 1322 aa21.92■■□□□ 1.1
Sdc1-205ENSMUST00000171158 CenpbP27790 599 aa21.91■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Pkd2O35245 966 aa21.9■■□□□ 1.1
Sdc1-205ENSMUST00000171158 Arhgap31A6X8Z5 1425 aa21.89■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Gm38655A0A286YDK6 273 aa21.89■■□□□ 1.09
Sdc1-205ENSMUST00000171158 AlkP97793 1621 aa21.88■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Pik3c2gO70167 1506 aa21.87■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Adgrb2Q8CGM1 1561 aa21.87■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Mroh2aD3Z750 1679 aa21.86■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Dhx57Q6P5D3 1388 aaKnown RBP21.86■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Magi1Q6RHR9 1471 aa21.85■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Mapkbp1Q6NS57 1503 aa21.85■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Ncoa1P70365 1447 aa21.84■■□□□ 1.09
Sdc1-205ENSMUST00000171158 Ccdc141E9Q8Q6 1531 aa21.83■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Map3k4O08648 1597 aa21.83■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Zcchc11B2RX14 1644 aaKnown RBP21.83■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Prex2Q3LAC4 1598 aa21.8■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Arhgef12Q8R4H2 1543 aaKnown RBP21.78■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Fam163aQ8CAA5 168 aa21.78■■□□□ 1.08
Sdc1-205ENSMUST00000171158 Supt6hQ62383 1726 aaKnown RBP21.77■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Rusc2Q80U22 1514 aa21.76■■□□□ 1.07
Sdc1-205ENSMUST00000171158 SafbD3YXK2 937 aaKnown RBP21.75■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Dnmt1P13864 1620 aaKnown RBP21.75■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Mlh3A0A1Y7VMP7 1443 aa21.75■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Kif14L0N7N1 1674 aaKnown RBP21.74■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Trpm2Q91YD4 1506 aa21.72■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Caskin1Q6P9K8 1431 aa21.72■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Mbd5B1AYB6 1498 aa21.72■■□□□ 1.07
Sdc1-205ENSMUST00000171158 Dhx9O70133 1380 aaKnown RBP21.69■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Tdrd9Q14BI7 1383 aa21.68■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Ttll5Q8CHB8 1328 aa21.67■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Rrbp1Q99PL5 1605 aaKnown RBP21.66■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Neo1P97798 1493 aa21.65■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Fmn2Q9JL04 1578 aa21.64■■□□□ 1.06
Sdc1-205ENSMUST00000171158 Fam208aQ69ZR9 1610 aaKnown RBP21.62■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Gm13695A2AK44 830 aa21.62■■□□□ 1.05
Sdc1-205ENSMUST00000171158 DroshaQ5HZJ0 1373 aaKnown RBP21.62■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Wdr7Q920I9 1489 aa21.61■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Mug2P28666 1451 aa21.6■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Fancd2Q80V62 1450 aa21.6■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Nup155Q99P88 1391 aaKnown RBP21.6■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Trak1Q6PD31 939 aa21.59■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Jph4Q80WT0 628 aa21.59■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Dapk1Q80YE7 1442 aa21.59■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Eif4g3Q80XI3 1579 aaKnown RBP21.58■■□□□ 1.05
Sdc1-205ENSMUST00000171158 Rgl3Q3UYI5 709 aa21.57■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Slc24a1Q91WD8 1130 aa21.57■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Naip6Q9JIB6 1403 aa21.56■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Mrs2Q5NCE8 434 aa21.56■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Cwc22Q8C5N3 908 aaKnown RBP21.55■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Adgrl2Q8JZZ7 1487 aa21.54■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Plekhg5Q66T02 1073 aa21.53■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Calr4Q3TQS0 420 aa21.52■■□□□ 1.04
Sdc1-205ENSMUST00000171158 Lrrc9Q8CDN9 1456 aa21.52■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Gm32742A0A1B0GT42 1604 aa21.51■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Slc4a2P13808 1237 aaKnown RBP21.51■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Exoc6Q8R313 802 aa21.5■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Cdk13Q69ZA1 1511 aaKnown RBP21.5■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Map4P27546 1125 aaKnown RBP21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Rundc1Q0VDN7 615 aa21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Wwc2Q6NXJ0 1187 aa21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Fkbp15Q6P9Q6 1216 aaKnown RBP21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Dot1lQ6XZL8 1540 aa21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 AknaQ80VW7 1404 aa21.49■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Rnf17Q99MV7 1640 aa21.48■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Mast1Q9R1L5 1570 aa21.48■■□□□ 1.03
Sdc1-205ENSMUST00000171158 PtprgQ05909 1442 aa21.48■■□□□ 1.03
Sdc1-205ENSMUST00000171158 RalgapbQ8BQZ4 1484 aa21.47■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Iqgap1Q9JKF1 1657 aaKnown RBP21.47■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Fgd6Q69ZL1 1399 aa21.47■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Myom3A2ABU4 1439 aa21.47■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Cpsf1Q9EPU4 1441 aaKnown RBP21.47■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Asxl1P59598 1514 aa21.46■■□□□ 1.03
Sdc1-205ENSMUST00000171158 Pdcd11Q6NS46 1862 aaKnown RBP21.46■■□□□ 1.03
Sdc1-205ENSMUST00000171158 PnisrA2AJT4 805 aaKnown RBP21.45■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Card11Q8CIS0 1159 aa21.45■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Ssh2Q5SW75 1423 aa21.45■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Arhgap5P97393 1501 aa21.44■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Neurl4Q5NCX5 1563 aa21.43■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Anp32aO35381 247 aa21.42■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms