RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Gcc2Q8CHG3 1679 aa15.85■□□□□ 0.13
Vps54-202ENSMUST00000109578 Plb1Q3TTY0 1478 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 WrnO09053 1401 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 Exoc6Q8R313 802 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 PxdnQ3UQ28 1475 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 Ncoa3O09000 1398 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 Ncoa1P70365 1447 aa15.84■□□□□ 0.13
Vps54-202ENSMUST00000109578 Arhgef40Q3UPH7 1517 aa15.82■□□□□ 0.12
Vps54-202ENSMUST00000109578 Setbp1Q9Z180 1582 aa15.82■□□□□ 0.12
Vps54-202ENSMUST00000109578 Rprd2Q6NXI6 1469 aaKnown RBP15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Rfx7F8VPJ6 1459 aa15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Ppp4r2Q0VGB7 417 aa15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Plekhh2Q8C115 1491 aa15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Soga1E1U8D0 1418 aa15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Disp1Q3TDN0 1521 aa15.81■□□□□ 0.12
Vps54-202ENSMUST00000109578 Arhgap27A2AB59 869 aa15.8■□□□□ 0.12
Vps54-202ENSMUST00000109578 Rgl3Q3UYI5 709 aa15.79■□□□□ 0.12
Vps54-202ENSMUST00000109578 NrdcQ8BHG1 1161 aa15.79■□□□□ 0.12
Vps54-202ENSMUST00000109578 Adamts12Q811B3 1600 aa15.78■□□□□ 0.12
Vps54-202ENSMUST00000109578 Gm13695A2AK44 830 aa15.78■□□□□ 0.12
Vps54-202ENSMUST00000109578 Kdm6bQ5NCY0 1641 aa15.78■□□□□ 0.12
Vps54-202ENSMUST00000109578 Mtus2Q3UHD3 1353 aa15.78■□□□□ 0.12
Vps54-202ENSMUST00000109578 Washc2Q6PGL7 1334 aa15.77■□□□□ 0.12
Vps54-202ENSMUST00000109578 Dhx9O70133 1380 aaKnown RBP15.76■□□□□ 0.11
Vps54-202ENSMUST00000109578 Mrc2Q64449 1479 aa15.76■□□□□ 0.11
Vps54-202ENSMUST00000109578 Supt16hQ920B9 1047 aa15.76■□□□□ 0.11
Vps54-202ENSMUST00000109578 SphkapQ6NSW3 1687 aa15.75■□□□□ 0.11
Vps54-202ENSMUST00000109578 Wdr43Q6ZQL4 677 aaKnown RBP15.74■□□□□ 0.11
Vps54-202ENSMUST00000109578 Adgrb2Q8CGM1 1561 aa15.73■□□□□ 0.11
Vps54-202ENSMUST00000109578 PnisrA2AJT4 805 aaKnown RBP15.71■□□□□ 0.11
Vps54-202ENSMUST00000109578 Trak1Q6PD31 939 aa15.71■□□□□ 0.11
Vps54-202ENSMUST00000109578 Pik3c2gO70167 1506 aa15.71■□□□□ 0.1
Vps54-202ENSMUST00000109578 Rundc1Q0VDN7 615 aa15.71■□□□□ 0.1
Vps54-202ENSMUST00000109578 Ttll5Q8CHB8 1328 aa15.7■□□□□ 0.1
Vps54-202ENSMUST00000109578 Dnajc5bQ9CQ94 199 aa15.69■□□□□ 0.1
Vps54-202ENSMUST00000109578 Grwd1Q810D6 446 aaKnown RBP15.69■□□□□ 0.1
Vps54-202ENSMUST00000109578 Setd1bQ8CFT2 1985 aa15.69■□□□□ 0.1
Vps54-202ENSMUST00000109578 AlkP97793 1621 aa15.68■□□□□ 0.1
Vps54-202ENSMUST00000109578 Dapk1Q80YE7 1442 aa15.68■□□□□ 0.1
Vps54-202ENSMUST00000109578 Abca16E9PWJ7 1678 aa15.68■□□□□ 0.1
Vps54-202ENSMUST00000109578 Rapgef6Q5NCJ1 1609 aa15.68■□□□□ 0.1
Vps54-202ENSMUST00000109578 Adcy10Q8C0T9 1614 aa15.68■□□□□ 0.1
Vps54-202ENSMUST00000109578 Kdm3bQ6ZPY7 1562 aa15.67■□□□□ 0.1
Vps54-202ENSMUST00000109578 Dhx57Q6P5D3 1388 aaKnown RBP15.67■□□□□ 0.1
Vps54-202ENSMUST00000109578 Cc2d2bA0A286YDU8 1405 aa15.67■□□□□ 0.1
Vps54-202ENSMUST00000109578 Il16O54824 1322 aa15.67■□□□□ 0.1
Vps54-202ENSMUST00000109578 Zbtb7cQ8VCZ7 619 aa15.65■□□□□ 0.1
Vps54-202ENSMUST00000109578 Card11Q8CIS0 1159 aa15.65■□□□□ 0.1
Vps54-202ENSMUST00000109578 Fkbp15Q6P9Q6 1216 aaKnown RBP15.64■□□□□ 0.09
Vps54-202ENSMUST00000109578 Kif14L0N7N1 1674 aaKnown RBP15.64■□□□□ 0.09
Vps54-202ENSMUST00000109578 Arhgap31A6X8Z5 1425 aa15.64■□□□□ 0.09
Vps54-202ENSMUST00000109578 Slc4a3P16283 1227 aa15.64■□□□□ 0.09
Vps54-202ENSMUST00000109578 Cwc22Q8C5N3 908 aaKnown RBP15.63■□□□□ 0.09
Vps54-202ENSMUST00000109578 Arhgef11Q68FM7 1552 aa15.63■□□□□ 0.09
Vps54-202ENSMUST00000109578 Ofd1Q80Z25 1017 aa15.63■□□□□ 0.09
Vps54-202ENSMUST00000109578 Tdrd9Q14BI7 1383 aa15.62■□□□□ 0.09
Vps54-202ENSMUST00000109578 Pak3Q61036 559 aa15.62■□□□□ 0.09
Vps54-202ENSMUST00000109578 Zbtb4Q5F293 982 aa15.62■□□□□ 0.09
Vps54-202ENSMUST00000109578 Plekhg5Q66T02 1073 aa15.62■□□□□ 0.09
Vps54-202ENSMUST00000109578 Shroom2A2ALU4 1481 aa15.61■□□□□ 0.09
Vps54-202ENSMUST00000109578 Cdc42bpaQ3UU96 1719 aa15.61■□□□□ 0.09
Vps54-202ENSMUST00000109578 Mug2P28666 1451 aa15.61■□□□□ 0.09
Vps54-202ENSMUST00000109578 Supt6hQ62383 1726 aaKnown RBP15.6■□□□□ 0.09
Vps54-202ENSMUST00000109578 Lamc1P02468 1607 aaKnown RBP15.6■□□□□ 0.09
Vps54-202ENSMUST00000109578 Nup160Q9Z0W3 1402 aaKnown RBP15.59■□□□□ 0.09
Vps54-202ENSMUST00000109578 Kcnh8P59111 1102 aa15.59■□□□□ 0.09
Vps54-202ENSMUST00000109578 Liat1Q810M6 228 aa15.58■□□□□ 0.09
Vps54-202ENSMUST00000109578 Kiaa1551Q5DTW7 1521 aa15.58■□□□□ 0.08
Vps54-202ENSMUST00000109578 Nup155Q99P88 1391 aaKnown RBP15.58■□□□□ 0.08
Vps54-202ENSMUST00000109578 Abcc2Q8VI47 1543 aa15.58■□□□□ 0.08
Vps54-202ENSMUST00000109578 L3mbtl2P59178 703 aa15.57■□□□□ 0.08
Vps54-202ENSMUST00000109578 Mbd5B1AYB6 1498 aa15.57■□□□□ 0.08
Vps54-202ENSMUST00000109578 Wdr7Q920I9 1489 aa15.56■□□□□ 0.08
Vps54-202ENSMUST00000109578 Map4P27546 1125 aaKnown RBP15.56■□□□□ 0.08
Vps54-202ENSMUST00000109578 Arhgef12Q8R4H2 1543 aaKnown RBP15.55■□□□□ 0.08
Vps54-202ENSMUST00000109578 Magi1Q6RHR9 1471 aa15.55■□□□□ 0.08
Vps54-202ENSMUST00000109578 Cdk13Q69ZA1 1511 aaKnown RBP15.55■□□□□ 0.08
Vps54-202ENSMUST00000109578 Myom3A2ABU4 1439 aa15.54■□□□□ 0.08
Vps54-202ENSMUST00000109578 Naip6Q9JIB6 1403 aa15.54■□□□□ 0.08
Vps54-202ENSMUST00000109578 Kif21bQ9QXL1 1668 aa15.54■□□□□ 0.08
Vps54-202ENSMUST00000109578 Map3k4O08648 1597 aa15.54■□□□□ 0.08
Vps54-202ENSMUST00000109578 Prex2Q3LAC4 1598 aa15.54■□□□□ 0.08
Vps54-202ENSMUST00000109578 Rtl5Q5DTT4 599 aa15.53■□□□□ 0.08
Vps54-202ENSMUST00000109578 Fam163aQ8CAA5 168 aa15.52■□□□□ 0.08
Vps54-202ENSMUST00000109578 Ifnlr1Q8CGK5 535 aa15.51■□□□□ 0.07
Vps54-202ENSMUST00000109578 Bcl11aQ9QYE3 773 aa15.51■□□□□ 0.07
Vps54-202ENSMUST00000109578 Pelp1Q9DBD5 1123 aaKnown RBP15.5■□□□□ 0.07
Vps54-202ENSMUST00000109578 Mroh2aD3Z750 1679 aa15.5■□□□□ 0.07
Vps54-202ENSMUST00000109578 Rpgrip1lQ8CG73 1264 aa15.48■□□□□ 0.07
Vps54-202ENSMUST00000109578 Mapkbp1Q6NS57 1503 aa15.48■□□□□ 0.07
Vps54-202ENSMUST00000109578 Egfem1Q8C088 590 aa15.48■□□□□ 0.07
Vps54-202ENSMUST00000109578 Ccdc141E9Q8Q6 1531 aa15.48■□□□□ 0.07
Vps54-202ENSMUST00000109578 Rrp7aQ9D1C9 280 aaKnown RBP15.47■□□□□ 0.07
Vps54-202ENSMUST00000109578 Trpm2Q91YD4 1506 aa15.45■□□□□ 0.06
Vps54-202ENSMUST00000109578 RalgapbQ8BQZ4 1484 aa15.45■□□□□ 0.06
Vps54-202ENSMUST00000109578 Q7TT23 1179 aa15.44■□□□□ 0.06
Vps54-202ENSMUST00000109578 Mlh3A0A1Y7VMP7 1443 aa15.44■□□□□ 0.06
Vps54-202ENSMUST00000109578 DiexfQ8BTT6 772 aaKnown RBP15.43■□□□□ 0.06
Vps54-202ENSMUST00000109578 Erbb3Q61526 1339 aa15.43■□□□□ 0.06
Vps54-202ENSMUST00000109578 Pbrm1Q8BSQ9 1634 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms