RNA–Protein interactions for RNA: ENSMUST00000052366.4

Pcdhb1-201, Transcript of Protocadherin beta 1, mousemouse

APPRIS P1 BASIC

Gene Pcdhb1, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1-201ENSMUST00000052366 Ncoa3O09000 1398 aa17.61■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Pprc1Q6NZN1 1644 aa17.61■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Setbp1Q9Z180 1582 aa17.6■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Arhgef40Q3UPH7 1517 aa17.6■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Calr4Q3TQS0 420 aa17.6■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Myt1Q8CFC2 1127 aa17.6■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Mtus2Q3UHD3 1353 aa17.59■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Arhgap27A2AB59 869 aa17.59■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Abca16E9PWJ7 1678 aa17.59■□□□□ 0.41
Pcdhb1-201ENSMUST00000052366 Setd1bQ8CFT2 1985 aa17.57■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Rprd2Q6NXI6 1469 aaKnown RBP17.57■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Rapgef6Q5NCJ1 1609 aa17.56■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Kdm6bQ5NCY0 1641 aa17.56■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Mrs2Q5NCE8 434 aa17.55■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Anp32aO35381 247 aa17.54■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 Ncoa1P70365 1447 aa17.53■□□□□ 0.4
Pcdhb1-201ENSMUST00000052366 SphkapQ6NSW3 1687 aa17.52■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Eif5bQ05D44 1216 aaKnown RBP17.51■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Adcy10Q8C0T9 1614 aa17.5■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Dnajc5bQ9CQ94 199 aa17.5■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Wwc2Q6NXJ0 1187 aa17.49■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Arhgef11Q68FM7 1552 aa17.49■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Nup160Q9Z0W3 1402 aaKnown RBP17.49■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Adgrb2Q8CGM1 1561 aa17.48■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Kdm3bQ6ZPY7 1562 aa17.48■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Rgl3Q3UYI5 709 aa17.47■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Cdc42bpaQ3UU96 1719 aa17.47■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Pik3c2gO70167 1506 aa17.47■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Cc2d2bA0A286YDU8 1405 aa17.47■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 NrdcQ8BHG1 1161 aa17.46■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Il16O54824 1322 aa17.46■□□□□ 0.39
Pcdhb1-201ENSMUST00000052366 Shroom2A2ALU4 1481 aa17.45■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Gm13695A2AK44 830 aa17.45■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Arhgap31A6X8Z5 1425 aa17.45■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Exoc6Q8R313 802 aa17.45■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 AlkP97793 1621 aa17.44■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Dhx9O70133 1380 aaKnown RBP17.44■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Pbrm1Q8BSQ9 1634 aaKnown RBP17.44■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Slc4a2P13808 1237 aaKnown RBP17.44■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Lamc1P02468 1607 aaKnown RBP17.43■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Abcc2Q8VI47 1543 aa17.42■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Kiaa1551Q5DTW7 1521 aa17.42■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Nolc1E9Q5C9 702 aaKnown RBP17.41■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Trak1Q6PD31 939 aa17.41■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Ttll5Q8CHB8 1328 aa17.4■□□□□ 0.38
Pcdhb1-201ENSMUST00000052366 Dhx57Q6P5D3 1388 aaKnown RBP17.39■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Kif21bQ9QXL1 1668 aa17.39■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Magi1Q6RHR9 1471 aa17.38■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Dapk1Q80YE7 1442 aa17.38■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Tdrd9Q14BI7 1383 aa17.38■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Rundc1Q0VDN7 615 aa17.37■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 P3h3Q8CG70 732 aa17.37■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Kif14L0N7N1 1674 aaKnown RBP17.37■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Fkbp15Q6P9Q6 1216 aaKnown RBP17.36■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Supt6hQ62383 1726 aaKnown RBP17.36■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Prex2Q3LAC4 1598 aa17.36■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Cwc22Q8C5N3 908 aaKnown RBP17.36■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Arhgef12Q8R4H2 1543 aaKnown RBP17.36■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Ccdc141E9Q8Q6 1531 aa17.35■□□□□ 0.37
Pcdhb1-201ENSMUST00000052366 Grwd1Q810D6 446 aaKnown RBP17.33■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Card11Q8CIS0 1159 aa17.33■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Nup155Q99P88 1391 aaKnown RBP17.33■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Mroh2aD3Z750 1679 aa17.33■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Fam163aQ8CAA5 168 aa17.33■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Washc2Q6PGL7 1334 aa17.32■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 PnisrA2AJT4 805 aaKnown RBP17.32■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Ppp4r2Q0VGB7 417 aa17.32■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Mapkbp1Q6NS57 1503 aa17.31■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Zbtb7cQ8VCZ7 619 aa17.31■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Mug2P28666 1451 aa17.31■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Map3k4O08648 1597 aa17.3■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Mbd5B1AYB6 1498 aa17.3■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Plekhg5Q66T02 1073 aa17.3■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Wdr43Q6ZQL4 677 aaKnown RBP17.3■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Map4P27546 1125 aaKnown RBP17.29■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Wdr7Q920I9 1489 aa17.28■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Lrriq1Q0P5X1 1673 aa17.28■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Mlh3A0A1Y7VMP7 1443 aa17.27■□□□□ 0.36
Pcdhb1-201ENSMUST00000052366 Naip6Q9JIB6 1403 aa17.25■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Cdk13Q69ZA1 1511 aaKnown RBP17.24■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Supt16hQ920B9 1047 aa17.24■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Trpm2Q91YD4 1506 aa17.23■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Caskin1Q6P9K8 1431 aa17.23■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Ofd1Q80Z25 1017 aa17.23■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Neo1P97798 1493 aa17.22■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Zcchc11B2RX14 1644 aaKnown RBP17.22■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Myom3A2ABU4 1439 aa17.21■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Jph4Q80WT0 628 aa17.21■□□□□ 0.35
Pcdhb1-201ENSMUST00000052366 Zbtb4Q5F293 982 aa17.2■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 Rrp7aQ9D1C9 280 aaKnown RBP17.19■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 DroshaQ5HZJ0 1373 aaKnown RBP17.18■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 RalgapbQ8BQZ4 1484 aa17.18■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 AknaQ80VW7 1404 aa17.17■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 Fmn2Q9JL04 1578 aa17.17■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 Dnmt1P13864 1620 aaKnown RBP17.16■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 Rusc2Q80U22 1514 aa17.15■□□□□ 0.34
Pcdhb1-201ENSMUST00000052366 Fancd2Q80V62 1450 aa17.14■□□□□ 0.33
Pcdhb1-201ENSMUST00000052366 Rock2P70336 1388 aa17.13■□□□□ 0.33
Pcdhb1-201ENSMUST00000052366 Dot1lQ6XZL8 1540 aa17.13■□□□□ 0.33
Pcdhb1-201ENSMUST00000052366 Cpsf1Q9EPU4 1441 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms