RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Kdm6bQ5NCY0 1641 aa25.69■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Ift140E9PY46 1464 aa25.66■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Usp47Q8BY87 1376 aa25.65■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 WrnO09053 1401 aa25.65■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Rfx7F8VPJ6 1459 aa25.64■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Pkd2O35245 966 aa25.64■■□□□ 1.7
Ccdc3-201ENSMUST00000027988 Abca16E9PWJ7 1678 aa25.63■■□□□ 1.69
Ccdc3-201ENSMUST00000027988 SphkapQ6NSW3 1687 aa25.61■■□□□ 1.69
Ccdc3-201ENSMUST00000027988 Rprd2Q6NXI6 1469 aaKnown RBP25.59■■□□□ 1.69
Ccdc3-201ENSMUST00000027988 Calr4Q3TQS0 420 aa25.57■■□□□ 1.68
Ccdc3-201ENSMUST00000027988 Plekhh2Q8C115 1491 aa25.57■■□□□ 1.68
Ccdc3-201ENSMUST00000027988 Ncoa1P70365 1447 aa25.57■■□□□ 1.68
Ccdc3-201ENSMUST00000027988 Rapgef6Q5NCJ1 1609 aa25.53■■□□□ 1.68
Ccdc3-201ENSMUST00000027988 Adgrb2Q8CGM1 1561 aa25.52■■□□□ 1.68
Ccdc3-201ENSMUST00000027988 Adcy10Q8C0T9 1614 aa25.51■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Nolc1E9Q5C9 702 aaKnown RBP25.5■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Arhgap27A2AB59 869 aa25.49■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Mrs2Q5NCE8 434 aa25.49■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Wwc2Q6NXJ0 1187 aa25.49■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Cdc42bpaQ3UU96 1719 aa25.48■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Slc4a2P13808 1237 aaKnown RBP25.48■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Arhgef11Q68FM7 1552 aa25.47■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 AlkP97793 1621 aa25.46■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Mtus2Q3UHD3 1353 aa25.46■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Kdm3bQ6ZPY7 1562 aa25.45■■□□□ 1.67
Ccdc3-201ENSMUST00000027988 Dhx9O70133 1380 aaKnown RBP25.44■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Abcc2Q8VI47 1543 aa25.44■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Anp32aO35381 247 aa25.44■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Nup160Q9Z0W3 1402 aaKnown RBP25.43■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Myt1Q8CFC2 1127 aa25.43■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Pik3c2gO70167 1506 aa25.43■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Eif5bQ05D44 1216 aaKnown RBP25.42■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Exoc6Q8R313 802 aa25.42■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Kif14L0N7N1 1674 aaKnown RBP25.42■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Shroom2A2ALU4 1481 aa25.4■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Lamc1P02468 1607 aaKnown RBP25.39■■□□□ 1.66
Ccdc3-201ENSMUST00000027988 Kif21bQ9QXL1 1668 aa25.38■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Kiaa1551Q5DTW7 1521 aa25.38■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Supt6hQ62383 1726 aaKnown RBP25.38■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Rgl3Q3UYI5 709 aa25.36■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Cc2d2bA0A286YDU8 1405 aa25.36■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Il16O54824 1322 aa25.35■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Gm13695A2AK44 830 aa25.35■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 P3h3Q8CG70 732 aa25.35■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Arhgap31A6X8Z5 1425 aa25.34■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Ttll5Q8CHB8 1328 aa25.34■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Dhx57Q6P5D3 1388 aaKnown RBP25.34■■□□□ 1.65
Ccdc3-201ENSMUST00000027988 Washc2Q6PGL7 1334 aa25.3■■□□□ 1.64
Ccdc3-201ENSMUST00000027988 Mroh2aD3Z750 1679 aa25.29■■□□□ 1.64
Ccdc3-201ENSMUST00000027988 Mbd5B1AYB6 1498 aa25.28■■□□□ 1.64
Ccdc3-201ENSMUST00000027988 Trak1Q6PD31 939 aa25.28■■□□□ 1.64
Ccdc3-201ENSMUST00000027988 Prex2Q3LAC4 1598 aa25.28■■□□□ 1.64
Ccdc3-201ENSMUST00000027988 Dapk1Q80YE7 1442 aa25.26■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Pbrm1Q8BSQ9 1634 aaKnown RBP25.26■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Mug2P28666 1451 aa25.26■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Tdrd9Q14BI7 1383 aa25.25■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 PnisrA2AJT4 805 aaKnown RBP25.24■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Map3k4O08648 1597 aa25.24■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Rundc1Q0VDN7 615 aa25.23■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Zcchc11B2RX14 1644 aaKnown RBP25.23■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Magi1Q6RHR9 1471 aa25.23■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Arhgef12Q8R4H2 1543 aaKnown RBP25.23■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 Wdr7Q920I9 1489 aa25.2■■□□□ 1.63
Ccdc3-201ENSMUST00000027988 NrdcQ8BHG1 1161 aa25.2■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Ppp4r2Q0VGB7 417 aa25.2■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Mapkbp1Q6NS57 1503 aa25.19■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Cdk13Q69ZA1 1511 aaKnown RBP25.19■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Grwd1Q810D6 446 aaKnown RBP25.19■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Supt16hQ920B9 1047 aa25.17■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Fkbp15Q6P9Q6 1216 aaKnown RBP25.16■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Trpm2Q91YD4 1506 aa25.16■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Naip6Q9JIB6 1403 aa25.16■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Ccdc141E9Q8Q6 1531 aa25.15■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Plekhg5Q66T02 1073 aa25.14■■□□□ 1.62
Ccdc3-201ENSMUST00000027988 Nup155Q99P88 1391 aaKnown RBP25.13■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Lrriq1Q0P5X1 1673 aa25.13■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Myom3A2ABU4 1439 aa25.13■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Fam163aQ8CAA5 168 aa25.12■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Card11Q8CIS0 1159 aa25.12■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Wdr43Q6ZQL4 677 aaKnown RBP25.12■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Cwc22Q8C5N3 908 aaKnown RBP25.09■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Zbtb7cQ8VCZ7 619 aa25.08■■□□□ 1.61
Ccdc3-201ENSMUST00000027988 Map4P27546 1125 aaKnown RBP25.06■■□□□ 1.6
Ccdc3-201ENSMUST00000027988 Mlh3A0A1Y7VMP7 1443 aa25.05■■□□□ 1.6
Ccdc3-201ENSMUST00000027988 Asxl1P59598 1514 aa25.01■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Neo1P97798 1493 aa25.01■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 RalgapbQ8BQZ4 1484 aa25■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Ofd1Q80Z25 1017 aa25■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Dot1lQ6XZL8 1540 aa25■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 L3mbtl2P59178 703 aa24.99■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Dnmt1P13864 1620 aaKnown RBP24.99■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Zbtb4Q5F293 982 aa24.99■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Kcnh8P59111 1102 aa24.98■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Caskin1Q6P9K8 1431 aa24.97■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Liat1Q810M6 228 aa24.97■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Pak3Q61036 559 aa24.97■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Slc4a3P16283 1227 aa24.96■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Fmn2Q9JL04 1578 aa24.95■■□□□ 1.59
Ccdc3-201ENSMUST00000027988 Jph4Q80WT0 628 aa24.94■■□□□ 1.58
Ccdc3-201ENSMUST00000027988 Ssh2Q5SW75 1423 aa24.94■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms