RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Caskin1Q6P9K8 1431 aa26.12■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Arhgef12Q8R4H2 1543 aaKnown RBP26.12■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Neo1P97798 1493 aa26.11■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Mtus2Q3UHD3 1353 aa26.11■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Chic2Q9D9G3 165 aa26.1■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Cabp1Q9JLK7 227 aa26.08■■□□□ 1.77
Chmp6-201ENSMUST00000026434 Adcy10Q8C0T9 1614 aa26.07■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Arhgef40Q3UPH7 1517 aa26.06■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Camsap2Q8C1B1 1461 aa26.06■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Fancd2Q80V62 1450 aa26.04■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Ube2uB1AUC4 352 aa26.03■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Cul7Q8VE73 1689 aa26.03■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Gm14025A2AP89 1413 aa26.02■■□□□ 1.76
Chmp6-201ENSMUST00000026434 AknaQ80VW7 1404 aa26.02■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Mroh2aD3Z750 1679 aa26.02■■□□□ 1.76
Chmp6-201ENSMUST00000026434 Mphosph9A6H5Y1 991 aa26■■□□□ 1.75
Chmp6-201ENSMUST00000026434 Setbp1Q9Z180 1582 aa26■■□□□ 1.75
Chmp6-201ENSMUST00000026434 Wdr7Q920I9 1489 aa25.98■■□□□ 1.75
Chmp6-201ENSMUST00000026434 Zcchc11B2RX14 1644 aaKnown RBP25.98■■□□□ 1.75
Chmp6-201ENSMUST00000026434 Kdm3bQ6ZPY7 1562 aa25.97■■□□□ 1.75
Chmp6-201ENSMUST00000026434 Prex2Q3LAC4 1598 aa25.94■■□□□ 1.74
Chmp6-201ENSMUST00000026434 Hspa5P20029 655 aaKnown RBP25.94■■□□□ 1.74
Chmp6-201ENSMUST00000026434 Kiaa1210E9Q0C6 1637 aa25.92■■□□□ 1.74
Chmp6-201ENSMUST00000026434 Kdm6bQ5NCY0 1641 aa25.91■■□□□ 1.74
Chmp6-201ENSMUST00000026434 Fam208aQ69ZR9 1610 aaKnown RBP25.9■■□□□ 1.74
Chmp6-201ENSMUST00000026434 Lamc1P02468 1607 aaKnown RBP25.89■■□□□ 1.73
Chmp6-201ENSMUST00000026434 Gm13697A2AK42 830 aa25.89■■□□□ 1.73
Chmp6-201ENSMUST00000026434 Naip5Q9R016 1403 aa25.87■■□□□ 1.73
Chmp6-201ENSMUST00000026434 Abcc1O35379 1528 aa25.86■■□□□ 1.73
Chmp6-201ENSMUST00000026434 Tdrd9Q14BI7 1383 aa25.85■■□□□ 1.73
Chmp6-201ENSMUST00000026434 Igf1rQ60751 1373 aa25.83■■□□□ 1.73
Chmp6-201ENSMUST00000026434 DroshaQ5HZJ0 1373 aaKnown RBP25.82■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Neurl4Q5NCX5 1563 aa25.81■■□□□ 1.72
Chmp6-201ENSMUST00000026434 SphkapQ6NSW3 1687 aa25.81■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Adgrl2Q8JZZ7 1487 aa25.79■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Rnf17Q99MV7 1640 aa25.78■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Cfap74Q3UY96 1578 aa25.78■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Fkbp15Q6P9Q6 1216 aaKnown RBP25.77■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Rprd2Q6NXI6 1469 aaKnown RBP25.77■■□□□ 1.72
Chmp6-201ENSMUST00000026434 Pkd2O35245 966 aa25.76■■□□□ 1.71
Chmp6-201ENSMUST00000026434 AlkP97793 1621 aa25.76■■□□□ 1.71
Chmp6-201ENSMUST00000026434 NhsB1AV60 1647 aa25.75■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Adgrb2Q8CGM1 1561 aa25.75■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Fmn2Q9JL04 1578 aa25.75■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Clstn2Q9ER65 966 aa25.74■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Nop58Q6DFW4 536 aaKnown RBP25.73■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Pik3c2gO70167 1506 aa25.73■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Mast1Q9R1L5 1570 aa25.72■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Kif21bQ9QXL1 1668 aa25.71■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Chd1P40201 1711 aa25.71■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Trpm2Q91YD4 1506 aa25.71■■□□□ 1.71
Chmp6-201ENSMUST00000026434 Arhgap5P97393 1501 aa25.68■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Pdcd11Q6NS46 1862 aaKnown RBP25.67■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Zfp644E9QA22 1323 aa25.67■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Usp47Q8BY87 1376 aa25.66■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Nup155Q99P88 1391 aaKnown RBP25.66■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Pprc1Q6NZN1 1644 aa25.65■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Gm32742A0A1B0GT42 1604 aa25.64■■□□□ 1.7
Chmp6-201ENSMUST00000026434 Prdm16A2A935 1275 aa25.64■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Abca8bQ8K440 1620 aa25.62■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Atp10dQ8K2X1 1416 aa25.61■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Abcc3B2RX12 1523 aa25.6■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Hecw1Q8K4P8 1604 aa25.59■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Ttll5Q8CHB8 1328 aa25.59■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Neurod1Q60867 357 aa25.59■■□□□ 1.69
Chmp6-201ENSMUST00000026434 Lrrc9Q8CDN9 1456 aa25.58■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Ythdc2B2RR83 1445 aaKnown RBP25.56■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Map4P27546 1125 aaKnown RBP25.56■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Sart1Q9Z315 806 aaKnown RBP25.56■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Hdac5Q9Z2V6 1113 aa25.55■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Anks4bQ8K3X6 423 aa25.54■■□□□ 1.68
Chmp6-201ENSMUST00000026434 PtprgQ05909 1442 aa25.54■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Ppargc1bQ8VHJ7 1014 aa25.53■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Trappc8E9PWG2 1437 aa25.52■■□□□ 1.68
Chmp6-201ENSMUST00000026434 Rrp7aQ9D1C9 280 aaKnown RBP25.5■■□□□ 1.67
Chmp6-201ENSMUST00000026434 Trak1Q6PD31 939 aa25.49■■□□□ 1.67
Chmp6-201ENSMUST00000026434 Ssh2Q5SW75 1423 aa25.47■■□□□ 1.67
Chmp6-201ENSMUST00000026434 Rock1P70335 1354 aa25.44■■□□□ 1.66
Chmp6-201ENSMUST00000026434 AI481877A2ALV5 1481 aa25.43■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Cwc22Q8C5N3 908 aaKnown RBP25.43■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Dhx9O70133 1380 aaKnown RBP25.42■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Gapvd1Q6PAR5 1458 aa25.42■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Pabpn1Q8CCS6 302 aaKnown RBP25.42■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Supt6hQ62383 1726 aaKnown RBP25.41■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Stra8P70278 393 aa25.4■■□□□ 1.66
Chmp6-201ENSMUST00000026434 Mbd5B1AYB6 1498 aa25.37■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Spag9Q58A65 1321 aaKnown RBP25.37■■□□□ 1.65
Chmp6-201ENSMUST00000026434 PtprtQ99M80 1454 aa25.36■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Ppip5k1A2ARP1 1436 aa25.35■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Ncoa1P70365 1447 aa25.35■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Pelp1Q9DBD5 1123 aaKnown RBP25.34■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Cpsf1Q9EPU4 1441 aaKnown RBP25.33■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Cdc42bpbQ7TT50 1713 aa25.33■■□□□ 1.65
Chmp6-201ENSMUST00000026434 Cd109Q8R422 1442 aa25.31■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Zfyve16Q80U44 1528 aa25.31■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Myom3A2ABU4 1439 aa25.3■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Kidins220E9Q9B7 1793 aa25.29■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Polr3aB2RXC6 1390 aa25.28■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Rgl3Q3UYI5 709 aa25.28■■□□□ 1.64
Chmp6-201ENSMUST00000026434 Sin3aQ60520 1274 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms