RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Map3k4O08648 1597 aa10.29□□□□□ -0.76
Ddb1-201ENSMUST00000025649 Naip1Q9QWK5 1403 aa10.29□□□□□ -0.76
Ddb1-201ENSMUST00000025649 Slx4Q6P1D7 1565 aa10.28□□□□□ -0.76
Ddb1-201ENSMUST00000025649 Arhgef12Q8R4H2 1543 aaKnown RBP10.27□□□□□ -0.76
Ddb1-201ENSMUST00000025649 Igf1rQ60751 1373 aa10.27□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Dnmt1P13864 1620 aaKnown RBP10.27□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Dnajc5P60904 198 aa10.26□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Polr3glQ8R0C0 218 aa10.26□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Mapk8ip2Q9ERE9 830 aa10.26□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Adgrl3Q80TS3 1537 aa10.25□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Myt1Q8CFC2 1127 aa10.25□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Ccnb3Q810T2 1396 aa10.25□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Fam163aQ8CAA5 168 aa10.24□□□□□ -0.77
Ddb1-201ENSMUST00000025649 BC005561E9Q5E2 1589 aa10.24□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Cep170Q6A065 1588 aa10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Magi1Q6RHR9 1471 aa10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Erich3F6QRE9 1637 aa10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 DiexfQ8BTT6 772 aaKnown RBP10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Tiam1Q60610 1591 aa10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Rtl5Q5DTT4 599 aa10.23□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Mug1P28665 1476 aa10.22□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Rapgef6Q5NCJ1 1609 aa10.21□□□□□ -0.77
Ddb1-201ENSMUST00000025649 PtprtQ99M80 1454 aa10.21□□□□□ -0.77
Ddb1-201ENSMUST00000025649 Col17a1Q07563 1470 aa10.19□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Atp10dQ8K2X1 1416 aa10.19□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Ncoa3O09000 1398 aa10.19□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Lmo7E9PYF4 1699 aaKnown RBP10.19□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Rrbp1Q99PL5 1605 aaKnown RBP10.19□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Fancd2Q80V62 1450 aa10.18□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Mtus2Q3UHD3 1353 aa10.18□□□□□ -0.78
Ddb1-201ENSMUST00000025649 AI481877A2ALV5 1481 aa10.18□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Tdrd9Q14BI7 1383 aa10.18□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Lemd3Q9WU40 921 aa10.18□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Gm1043A0A140LJC2 1431 aa10.17□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Upf2A2AT37 1269 aaKnown RBP10.17□□□□□ -0.78
Ddb1-201ENSMUST00000025649 NexmifQ5DTT1 1515 aa10.16□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Chd1P40201 1711 aa10.16□□□□□ -0.78
Ddb1-201ENSMUST00000025649 P3h3Q8CG70 732 aa10.15□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Rrp7aQ9D1C9 280 aaKnown RBP10.15□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Anp32aO35381 247 aa10.15□□□□□ -0.78
Ddb1-201ENSMUST00000025649 Wdr7Q920I9 1489 aa10.15□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Sart1Q9Z315 806 aaKnown RBP10.15□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Kdm5bQ80Y84 1544 aa10.14□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Cabp1Q9JLK7 227 aa10.14□□□□□ -0.79
Ddb1-201ENSMUST00000025649 A2mQ6GQT1 1474 aa10.14□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Arhgap5P97393 1501 aa10.14□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Prex2Q3LAC4 1598 aa10.14□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Zcchc11B2RX14 1644 aaKnown RBP10.13□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Sall2Q9QX96 1004 aa10.13□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Mrs2Q5NCE8 434 aa10.12□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Rgl3Q3UYI5 709 aa10.11□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Arhgef11Q68FM7 1552 aa10.11□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Plekhh2Q8C115 1491 aa10.11□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Znf608Q56A10 1511 aa10.1□□□□□ -0.79
Ddb1-201ENSMUST00000025649 Peg3Q3URU2 1571 aa10.09□□□□□ -0.79
Ddb1-201ENSMUST00000025649 IqubQ8CDK3 788 aa10.08□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Mroh2aD3Z750 1679 aa10.07□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Mroh3A0A1D5RM54 893 aa10.07□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Rad21Q61550 635 aaKnown RBP10.07□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Mlh3A0A1Y7VMP7 1443 aa10.06□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Rangap1P46061 589 aaKnown RBP10.06□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Mia2Q91ZV0 1396 aa10.06□□□□□ -0.8
Ddb1-201ENSMUST00000025649 DaxxO35613 739 aa10.05□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Kdm2aP59997 1161 aa10.05□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Lrrc9Q8CDN9 1456 aa10.05□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Mapkbp1Q6NS57 1503 aa10.05□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Srpk2O54781 681 aaKnown RBP10.04□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Csrnp3P59055 597 aa10.04□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Caskin1Q6P9K8 1431 aa10.04□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Ak9G3UYQ4 1894 aa10.03□□□□□ -0.8
Ddb1-201ENSMUST00000025649 Lmtk2Q3TYD6 1471 aa10.02□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Gcc2Q8CHG3 1679 aa10.02□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Kiaa1551Q5DTW7 1521 aa10.02□□□□□ -0.81
Ddb1-201ENSMUST00000025649 NhsB1AV60 1647 aa10.02□□□□□ -0.81
Ddb1-201ENSMUST00000025649 UacaQ8CGB3 1411 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Gm20521D3Z5F7 333 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Grwd1Q810D6 446 aaKnown RBP10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Map3k5O35099 1380 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Kif3bQ61771 747 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Trappc8E9PWG2 1437 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Fgd1P52734 960 aa10.01□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Abcc5Q9R1X5 1436 aa10□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Depdc5P61460 1591 aa10□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Exosc9Q9JHI7 438 aaKnown RBP10□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Pcdh10E9PXQ7 1057 aa10□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Calr4Q3TQS0 420 aa10□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Adcy10Q8C0T9 1614 aa9.99□□□□□ -0.81
Ddb1-201ENSMUST00000025649 3425401B19RikD3Z1D3 1412 aa9.99□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Arhgef40Q3UPH7 1517 aa9.99□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Cwc22Q8C5N3 908 aaKnown RBP9.99□□□□□ -0.81
Ddb1-201ENSMUST00000025649 MyclP10166 368 aa9.99□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Prdm16A2A935 1275 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Map4P27546 1125 aaKnown RBP9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 MlecQ6ZQI3 291 aaKnown RBP9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Anks4bQ8K3X6 423 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Zfp777B9EKF4 885 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 ArxO35085 564 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 OvosQ3UU35 1456 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Setbp1Q9Z180 1582 aa9.98□□□□□ -0.81
Ddb1-201ENSMUST00000025649 Card11Q8CIS0 1159 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 85.9 ms