RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GIP4P39732 760 aa8.11□□□□□ -1.11
SRP54YPR088C YJL070CP40361 888 aa8.11□□□□□ -1.11
SRP54YPR088C MAM33P40513 266 aa8.11□□□□□ -1.11
SRP54YPR088C GTO1P48239 356 aa8.11□□□□□ -1.11
SRP54YPR088C SDH1Q00711 640 aa8.11□□□□□ -1.11
SRP54YPR088C GGA1Q06336 557 aa8.11□□□□□ -1.11
SRP54YPR088C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SRP54YPR088C PLB3Q08108 686 aa8.11□□□□□ -1.11
SRP54YPR088C YDR056CQ12025 205 aa8.11□□□□□ -1.11
SRP54YPR088C SLF1Q12034 447 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C YPL245WQ12179 454 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C MHT1Q12525 324 aa8.11□□□□□ -1.11
SRP54YPR088C BEM2P39960 2167 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C TPK2P06245 380 aa8.11□□□□□ -1.11
SRP54YPR088C CCA1P21269 546 aa8.11□□□□□ -1.11
SRP54YPR088C CIN8P27895 1000 aa8.11□□□□□ -1.11
SRP54YPR088C SIN4P32259 974 aa8.11□□□□□ -1.11
SRP54YPR088C RML2P32611 393 aa8.11□□□□□ -1.11
SRP54YPR088C DEF1P35732 738 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C INM1P38710 295 aa8.11□□□□□ -1.11
SRP54YPR088C YPT35P38815 214 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C IMA5P40884 581 aa8.11□□□□□ -1.11
SRP54YPR088C PTR3P43606 678 aa8.11□□□□□ -1.11
SRP54YPR088C AAT1Q01802 451 aa8.11□□□□□ -1.11
SRP54YPR088C HSP31Q04432 237 aa8.11□□□□□ -1.11
SRP54YPR088C ATG26Q06321 1198 aa8.11□□□□□ -1.11
SRP54YPR088C PSR1Q07800 427 aa8.11□□□□□ -1.11
SRP54YPR088C YPR011CQ12251 326 aa8.11□□□□□ -1.11
SRP54YPR088C RGT2Q12300 763 aa8.11□□□□□ -1.11
SRP54YPR088C YCL012CQ8J0M4 134 aa8.11□□□□□ -1.11
SRP54YPR088C BRR1Q99177 341 aaPredicted RBP8.11□□□□□ -1.11
SRP54YPR088C PRT1P06103 763 aaKnown RBP8.1□□□□□ -1.11
SRP54YPR088C ATP7P30902 174 aa8.1□□□□□ -1.11
SRP54YPR088C TCD2P36101 447 aaKnown RBP8.1□□□□□ -1.11
SRP54YPR088C IST2P38250 946 aa8.1□□□□□ -1.11
SRP54YPR088C RRP3P38712 501 aaKnown RBP8.1□□□□□ -1.11
SRP54YPR088C NDE1P40215 560 aa8.1□□□□□ -1.11
SRP54YPR088C MDJ2P42834 146 aa8.1□□□□□ -1.11
SRP54YPR088C GCV1P48015 400 aa8.1□□□□□ -1.11
SRP54YPR088C DIA3P52290 468 aa8.1□□□□□ -1.11
SRP54YPR088C ERP6P53198 216 aa8.1□□□□□ -1.11
SRP54YPR088C CWC24P53769 259 aa8.1□□□□□ -1.11
SRP54YPR088C MPS1P54199 764 aa8.1□□□□□ -1.11
SRP54YPR088C ECM9Q02202 377 aa8.1□□□□□ -1.11
SRP54YPR088C IRC15Q02733 499 aa8.1□□□□□ -1.11
SRP54YPR088C MMT1Q03218 510 aa8.1□□□□□ -1.11
SRP54YPR088C HFD1Q04458 532 aa8.1□□□□□ -1.11
SRP54YPR088C ATG29Q12092 213 aa8.1□□□□□ -1.11
SRP54YPR088C JLP1Q12358 412 aa8.1□□□□□ -1.11
SRP54YPR088C RPL24AP04449 155 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C DST1P07273 309 aa8.09□□□□□ -1.11
SRP54YPR088C SGV1P23293 657 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C GBP2P25555 427 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
SRP54YPR088C HXT4P32467 576 aa8.09□□□□□ -1.11
SRP54YPR088C SLX5P32828 619 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C YCR087C-AP37263 153 aa8.09□□□□□ -1.11
SRP54YPR088C YBR071WP38243 211 aa8.09□□□□□ -1.11
SRP54YPR088C HXT6P39003 570 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C HXT7P39004 570 aa8.09□□□□□ -1.11
SRP54YPR088C AYR1P40471 297 aa8.09□□□□□ -1.11
SRP54YPR088C DIM1P41819 318 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C MEP2P41948 499 aa8.09□□□□□ -1.11
SRP54YPR088C ART5P53244 586 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C IDP3P53982 420 aaKnown RBP8.09□□□□□ -1.11
SRP54YPR088C RDS2P19541 446 aaKnown RBP8.08□□□□□ -1.12
SRP54YPR088C TFC1P32367 649 aa8.08□□□□□ -1.12
SRP54YPR088C DSF2P38213 736 aa8.08□□□□□ -1.12
SRP54YPR088C BAT1P38891 393 aaKnown RBP8.08□□□□□ -1.12
SRP54YPR088C MET12P46151 657 aa8.08□□□□□ -1.12
SRP54YPR088C COS12P53053 380 aa8.08□□□□□ -1.12
SRP54YPR088C COS6P53344 381 aa8.08□□□□□ -1.12
SRP54YPR088C CAF120P53836 1060 aa8.08□□□□□ -1.12
SRP54YPR088C NIS1P53939 407 aa8.08□□□□□ -1.12
SRP54YPR088C ATP25Q03153 612 aa8.08□□□□□ -1.12
SRP54YPR088C ASA1Q06822 443 aa8.08□□□□□ -1.12
SRP54YPR088C MUM3Q08750 479 aa8.08□□□□□ -1.12
SRP54YPR088C YVC1Q12324 675 aa8.08□□□□□ -1.12
SRP54YPR088C ADF1Q2V2Q1 113 aa8.08□□□□□ -1.12
SRP54YPR088C MRP13P12686 339 aa8.07□□□□□ -1.12
SRP54YPR088C AAR2P32357 355 aaPredicted RBP8.07□□□□□ -1.12
SRP54YPR088C MGM101P32787 269 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C ROT2P38138 954 aa8.07□□□□□ -1.12
SRP54YPR088C DED81P38707 554 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C NUP85P46673 744 aa8.07□□□□□ -1.12
SRP54YPR088C SUM1P46676 1062 aa8.07□□□□□ -1.12
SRP54YPR088C RPM2Q02773 1202 aa8.07□□□□□ -1.12
SRP54YPR088C MET31Q03081 177 aa8.07□□□□□ -1.12
SRP54YPR088C EFR3Q03653 782 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C ROT1Q03691 256 aa8.07□□□□□ -1.12
SRP54YPR088C HMO1Q03973 246 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C SRO7Q12038 1033 aa8.07□□□□□ -1.12
SRP54YPR088C SUL2Q12325 893 aa8.07□□□□□ -1.12
SRP54YPR088C YKL018C-AQ3E7A7 99 aa8.07□□□□□ -1.12
SRP54YPR088C RPS4AP0CX35 261 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C RPS4BP0CX36 261 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C TOP3P13099 656 aa8.07□□□□□ -1.12
SRP54YPR088C MSS116P15424 664 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C SCL1P21243 252 aaKnown RBP8.07□□□□□ -1.12
SRP54YPR088C HCM1P25364 564 aa8.07□□□□□ -1.12
SRP54YPR088C MRPL17P36528 281 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms