RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	ARP6	Q12509	438 aa		0.91	□□□□□ -2.26
SEC8	YPR055W	CAR1	P00812	333 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	COR1	P07256	457 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	MSN2	P33748	704 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	SEF1	P34228	1148 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	YNK1	P36010	153 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	TCD2	P36101	447 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	YKL023W	P36103	277 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	TCM62	P38228	572 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	TIF4631	P39935	952 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	APT1	P49435	187 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	YGR127W	P53275	312 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	ZPR1	P53303	486 aa	Known RBP	0.9	□□□□□ -2.26
SEC8	YPR055W	SYO1	Q07395	620 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	RSA1	Q08932	381 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	PPT2	Q12036	173 aa		0.9	□□□□□ -2.26
SEC8	YPR055W	SEC53	P07283	254 aa	Known RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	CBS1	P14066	229 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	MET8	P15807	274 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	SPC110	P32380	944 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YME1	P32795	747 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	BNA4	P38169	460 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	AVT5	P38176	459 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	CIN4	P39110	191 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YEH1	Q07804	573 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	CFT2	Q12102	859 aa	Predicted RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	YLL056C	Q12177	298 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YML133C	Q03099	1374 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YLL067C	Q07888	1374 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YLL066C	Q99208	1374 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	CHS1	P08004	1131 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	GFD2	P25370	566 aa	Known RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	CPR3	P25719	182 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	PMU1	P36069	295 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	TUL1	P36096	758 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	SDS24	P38314	527 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	MSR1	P38714	643 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YEL057C	P39983	233 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YIL067C	P40514	678 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	ROK1	P45818	564 aa	Predicted RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	FAR3	P46671	204 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	RBG2	P53295	368 aa	Known RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	ARE2	P53629	642 aa	Known RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	MRPL51	Q06090	140 aa	Predicted RBP	0.9	□□□□□ -2.27
SEC8	YPR055W	NKP1	Q12493	238 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	YCL021W-A	Q96VH3	125 aa		0.9	□□□□□ -2.27
SEC8	YPR055W	CYB2	P00175	591 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	CPR1	P14832	162 aa	Known RBP	0.89	□□□□□ -2.27
SEC8	YPR055W	FUN19	P28003	413 aa	Predicted RBP	0.89	□□□□□ -2.27
SEC8	YPR055W	YHR210C	P38893	341 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	CSM2	P40465	213 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	COS10	P52924	374 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	TOF2	Q02208	771 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	RPM2	Q02773	1202 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	PIR3	Q03180	325 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	MFB1	Q04922	465 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	VPS38	Q05919	439 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	YOR365C	Q08844	703 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	CTI6	Q08923	506 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	YDL009C	Q12210	107 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	MBB1	P39534	108 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	HAT2	P39984	401 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	SYG1	P40528	902 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	POP1	P41812	875 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	GWT1	P47026	490 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	YJR154W	P47181	346 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	AVT4	P50944	713 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	VID30	P53076	958 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	GOR1	P53839	350 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	HEF3	P53978	1044 aa	Known RBP	0.89	□□□□□ -2.27
SEC8	YPR055W	IRC15	Q02733	499 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	HCR1	Q05775	265 aa	Known RBP	0.89	□□□□□ -2.27
SEC8	YPR055W	OPY2	Q06810	360 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	TLG2	Q08144	397 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	NOP58	Q12499	511 aa	Known RBP	0.89	□□□□□ -2.27
SEC8	YPR055W	CTF3	Q12748	733 aa		0.89	□□□□□ -2.27
SEC8	YPR055W	SUC2	P00724	532 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	SUI2	P20459	304 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	SHP1	P34223	423 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	FRE2	P36033	711 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	RFS1	P38234	210 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	TMA108	P40462	946 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	GCD10	P41814	478 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	SPG5	P42933	373 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	PET130	P47065	347 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	BOR1	P53838	576 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	VPS75	P53853	264 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	RPT6	Q01939	405 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	YDR239C	Q03780	787 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	BUD21	Q08492	214 aa	Predicted RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	RAV1	P47104	1357 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	ATP11	P32453	318 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	UTR4	P32626	227 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	WBP1	P33767	430 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	DUG2	P38149	878 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	YBR225W	P38321	900 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	FLC2	P39719	783 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	ISC1	P40015	477 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	MKT1	P40850	830 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	ALT2	P52892	507 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms