RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C BUD16P39988 312 aa3.8□□□□□ -1.8
CIT1YNR001C MKT1P40850 830 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C FET5P43561 622 aa3.8□□□□□ -1.8
CIT1YNR001C RFX1P48743 811 aa3.8□□□□□ -1.8
CIT1YNR001C AMA1P50082 593 aa3.8□□□□□ -1.8
CIT1YNR001C CUE3P53137 624 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C MLC1P53141 149 aa3.8□□□□□ -1.8
CIT1YNR001C PXR1P53335 271 aaPredicted RBP3.8□□□□□ -1.8
CIT1YNR001C ERV25P54837 211 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C RPA49Q01080 415 aaPredicted RBP3.8□□□□□ -1.8
CIT1YNR001C INA17Q02888 182 aa3.8□□□□□ -1.8
CIT1YNR001C CSI1Q04368 295 aa3.8□□□□□ -1.8
CIT1YNR001C SOV1Q04748 898 aa3.8□□□□□ -1.8
CIT1YNR001C GFD1Q04839 188 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C DBP9Q06218 594 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C PHO92Q06390 306 aa3.8□□□□□ -1.8
CIT1YNR001C CRN1Q06440 651 aa3.8□□□□□ -1.8
CIT1YNR001C YLH47Q06493 454 aa3.8□□□□□ -1.8
CIT1YNR001C HBT1Q07653 1046 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C SLK19Q08581 821 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C CHS5Q12114 671 aaKnown RBP3.8□□□□□ -1.8
CIT1YNR001C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CIT1YNR001C PFK27Q12471 397 aaPredicted RBP3.8□□□□□ -1.8
CIT1YNR001C YBR255C-AQ3E776 120 aa3.8□□□□□ -1.8
CIT1YNR001C YKL068W-AQ3E826 78 aa3.8□□□□□ -1.8
CIT1YNR001C MF(ALPHA)1P01149 165 aa3.79□□□□□ -1.8
CIT1YNR001C YML003WP0CF16 290 aa3.79□□□□□ -1.8
CIT1YNR001C RFA2P26754 273 aaKnown RBP3.79□□□□□ -1.8
CIT1YNR001C MRE11P32829 692 aa3.79□□□□□ -1.8
CIT1YNR001C YME2P32843 850 aa3.79□□□□□ -1.8
CIT1YNR001C VPS17P32913 551 aa3.79□□□□□ -1.8
CIT1YNR001C PPQ1P32945 549 aa3.79□□□□□ -1.8
CIT1YNR001C UBC6P33296 250 aaPredicted RBP3.79□□□□□ -1.8
CIT1YNR001C SUR1P33300 382 aa3.79□□□□□ -1.8
CIT1YNR001C NAS2P40555 220 aa3.79□□□□□ -1.8
CIT1YNR001C EPL1P43572 832 aa3.79□□□□□ -1.8
CIT1YNR001C YJL163CP46996 555 aa3.79□□□□□ -1.8
CIT1YNR001C DCP2P53550 970 aaKnown RBP3.79□□□□□ -1.8
CIT1YNR001C DSL1P53847 754 aa3.79□□□□□ -1.8
CIT1YNR001C IPI3P53877 555 aa3.79□□□□□ -1.8
CIT1YNR001C YAT1P80235 687 aa3.79□□□□□ -1.8
CIT1YNR001C TIM11P81449 96 aaPredicted RBP3.79□□□□□ -1.8
CIT1YNR001C SPO19Q03029 223 aa3.79□□□□□ -1.8
CIT1YNR001C YMR102CQ03177 834 aa3.79□□□□□ -1.8
CIT1YNR001C CWC21Q03375 135 aaKnown RBP3.79□□□□□ -1.8
CIT1YNR001C GRX3Q03835 250 aa3.79□□□□□ -1.8
CIT1YNR001C PML1Q07930 204 aaPredicted RBP3.79□□□□□ -1.8
CIT1YNR001C APL5Q08951 932 aaKnown RBP3.79□□□□□ -1.8
CIT1YNR001C ATG9Q12142 997 aa3.79□□□□□ -1.8
CIT1YNR001C TFB5Q3E7C1 72 aaPredicted RBP3.79□□□□□ -1.8
CIT1YNR001C YIL002W-AQ3E7Z5 69 aa3.79□□□□□ -1.8
CIT1YNR001C TOR2P32600 2474 aaKnown RBP3.79□□□□□ -1.8
CIT1YNR001C RSF2P46974 1380 aa3.79□□□□□ -1.8
CIT1YNR001C HIP1P06775 603 aa3.78□□□□□ -1.8
CIT1YNR001C SEC14P24280 304 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C CDC10P25342 322 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C ADH7P25377 361 aa3.78□□□□□ -1.8
CIT1YNR001C PHO91P27514 894 aa3.78□□□□□ -1.8
CIT1YNR001C YME1P32795 747 aa3.78□□□□□ -1.8
CIT1YNR001C WBP1P33767 430 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C SRB2P34162 210 aa3.78□□□□□ -1.8
CIT1YNR001C YSW1P38280 609 aa3.78□□□□□ -1.8
CIT1YNR001C SDH8P38345 138 aa3.78□□□□□ -1.8
CIT1YNR001C FMO1P38866 432 aa3.78□□□□□ -1.8
CIT1YNR001C SEC31P38968 1273 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C CCT6P39079 546 aa3.78□□□□□ -1.8
CIT1YNR001C YIR042CP40586 236 aa3.78□□□□□ -1.8
CIT1YNR001C TRS85P46944 698 aa3.78□□□□□ -1.8
CIT1YNR001C RPS7BP48164 190 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C IMD4P50094 524 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C DIA3P52290 468 aa3.78□□□□□ -1.8
CIT1YNR001C ALT2P52892 507 aa3.78□□□□□ -1.8
CIT1YNR001C YGL138CP53122 345 aa3.78□□□□□ -1.8
CIT1YNR001C YGR079WP53249 370 aa3.78□□□□□ -1.8
CIT1YNR001C PDR16P53860 351 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C RHO5P53879 331 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C AQR1P53943 586 aa3.78□□□□□ -1.8
CIT1YNR001C TIM44Q01852 431 aa3.78□□□□□ -1.8
CIT1YNR001C RRN5Q02983 363 aa3.78□□□□□ -1.8
CIT1YNR001C FIN1Q03898 291 aa3.78□□□□□ -1.8
CIT1YNR001C RNH1Q04740 348 aa3.78□□□□□ -1.8
CIT1YNR001C YSH1Q06224 779 aaPredicted RBP3.78□□□□□ -1.8
CIT1YNR001C NOP6Q07623 225 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C IRC13Q08630 104 aa3.78□□□□□ -1.8
CIT1YNR001C GPN2Q08726 347 aaPredicted RBP3.78□□□□□ -1.8
CIT1YNR001C BMS1Q08965 1183 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C AEP3Q12089 606 aa3.78□□□□□ -1.8
CIT1YNR001C MRH1Q12117 320 aaPredicted RBP3.78□□□□□ -1.8
CIT1YNR001C ISN1Q99312 450 aa3.78□□□□□ -1.8
CIT1YNR001C HXK2P04807 486 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C GAL7P08431 366 aa3.78□□□□□ -1.8
CIT1YNR001C BUD14P27637 709 aa3.78□□□□□ -1.8
CIT1YNR001C SSE2P32590 693 aaKnown RBP3.78□□□□□ -1.8
CIT1YNR001C RFT1P38206 574 aaPredicted RBP3.78□□□□□ -1.8
CIT1YNR001C SLM4P38247 162 aa3.78□□□□□ -1.8
CIT1YNR001C EFM2P38347 419 aa3.78□□□□□ -1.8
CIT1YNR001C PET100P38958 111 aa3.78□□□□□ -1.8
CIT1YNR001C MRX1P40050 688 aa3.78□□□□□ -1.8
CIT1YNR001C YTA12P40341 825 aa3.78□□□□□ -1.8
CIT1YNR001C CHS6P40955 746 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms