RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B HMLALPHA2P0CY09 210 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B SPO16P17122 198 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B OSM1P21375 501 aaKnown RBP0.34□□□□□ -2.35
YNL054W-BYNL054W-B MCM4P30665 933 aaKnown RBP0.34□□□□□ -2.35
YNL054W-BYNL054W-B SAC1P32368 623 aaKnown RBP0.34□□□□□ -2.35
YNL054W-BYNL054W-B GCG1P32656 232 aaKnown RBP0.34□□□□□ -2.35
YNL054W-BYNL054W-B PHD1P36093 366 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B RCK2P38623 610 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B BUD27P43573 796 aaKnown RBP RIP-Chip data0.34□□□□□ -2.35not detected
YNL054W-BYNL054W-B YMR155WQ03795 547 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B YOL019WQ08157 551 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B ETT1Q08421 412 aaKnown RBP0.34□□□□□ -2.35
YNL054W-BYNL054W-B PCL8Q08966 492 aa0.34□□□□□ -2.35
YNL054W-BYNL054W-B RAP1P11938 827 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B CWH43P25618 953 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B SSZ1P38788 538 aaKnown RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B ERR3P42222 437 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B OGG1P53397 376 aaPredicted RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B SLG1P54867 378 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B PIG1Q06216 648 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B APL5Q08951 932 aaKnown RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B RRP43P25359 394 aaPredicted RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B TGL1P34163 548 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B ARO9P38840 513 aaPredicted RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B PES4P39684 611 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B SEO1P39709 593 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B CAB2P40506 365 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B LYS14P40971 790 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B YGL138CP53122 345 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B PPM1Q04081 328 aa0.34□□□□□ -2.36
YNL054W-BYNL054W-B DDP1Q99321 188 aaKnown RBP0.34□□□□□ -2.36
YNL054W-BYNL054W-B POL4P25615 582 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B UTR5P32630 166 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B BYE1P36106 594 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B PFF1P38244 976 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B AIP1P46680 615 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B URB2P47108 1174 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B FMP45Q07651 309 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B YOR378WQ08902 515 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B RMD5Q12508 421 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B ADE3P07245 946 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B KRE6P32486 720 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B ALP1P38971 573 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B MRX6P48564 524 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B RPL22BP56628 122 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B PDS5Q04264 1277 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B GIS3Q12418 502 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B YDR034W-BQ6Q5X2 51 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B TOP1P04786 769 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B PHO13P19881 312 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B RME1P32338 300 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B COX13P32799 129 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B MTC2P34246 357 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B MAL33P38157 468 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B PSY4P38193 441 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B EFM2P38347 419 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B STP2P38704 541 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B OSH3P38713 996 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B ERV46P39727 415 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B ASK10P48361 1146 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B SMA1Q02651 245 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B USA1Q03714 838 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B BUD22Q04347 519 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B API2Q04413 109 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B TRI1Q05024 226 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B ALG1P16661 449 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B ISY1P21374 235 aaPredicted RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B BMH1P29311 267 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B DBP7P36120 742 aaKnown RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B APM3P38153 483 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B AXL2P38928 823 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B SPO22P40511 975 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B GOR1P53839 350 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B IPI3P53877 555 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B SYF1Q04048 859 aaPredicted RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B ARA2Q04212 335 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B RAD33Q04231 177 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B YLR413WQ06689 675 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B YDL218WQ07629 317 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B SIL1Q08199 421 aa0.33□□□□□ -2.36
YNL054W-BYNL054W-B RTK1Q12100 620 aaPredicted RBP0.33□□□□□ -2.36
YNL054W-BYNL054W-B FOB1O13329 566 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B RPS3P05750 240 aaKnown RBP0.32□□□□□ -2.36
YNL054W-BYNL054W-B PIF1P07271 859 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B PEP5P12868 1029 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B MAK32P23060 363 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B NIP1P32497 812 aaKnown RBP0.32□□□□□ -2.36
YNL054W-BYNL054W-B UBS1P38290 277 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B SHO1P40073 367 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ASP3-2P0CX77 362 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ASP3-3P0CX78 362 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ASP3-4P0CX79 362 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ASP3-1P0CZ17 362 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ADH4P10127 382 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B ATS1P31386 333 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B XRS2P33301 854 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B SLC1P33333 303 aa0.32□□□□□ -2.36
YNL054W-BYNL054W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data0.32□□□□□ -2.36not detected
YNL054W-BYNL054W-B ADE17P38009 592 aaKnown RBP0.32□□□□□ -2.36
YNL054W-BYNL054W-B TIF5P38431 405 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms