RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RDR1Q08904 546 aa4.8□□□□□ -1.64
SEC9YGR009C YLR053CQ12026 108 aa4.8□□□□□ -1.64
SEC9YGR009C YDL206WQ12424 762 aa4.8□□□□□ -1.64
SEC9YGR009C QCR2P07257 368 aa4.79□□□□□ -1.64
SEC9YGR009C MET2P08465 486 aa4.79□□□□□ -1.64
SEC9YGR009C RNR2P09938 399 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C TRK1P12685 1235 aa4.79□□□□□ -1.64
SEC9YGR009C GSY1P23337 708 aa4.79□□□□□ -1.64
SEC9YGR009C SWI4P25302 1093 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C RRT12P25381 491 aa4.79□□□□□ -1.64
SEC9YGR009C PBN1P25580 416 aa4.79□□□□□ -1.64
SEC9YGR009C PRE4P30657 266 aa4.79□□□□□ -1.64
SEC9YGR009C SER1P33330 395 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C RPF2P36160 344 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C VBA5P36172 582 aa4.79□□□□□ -1.64
SEC9YGR009C GEX2P36173 615 aa4.79□□□□□ -1.64
SEC9YGR009C YBP1P38315 674 aa4.79□□□□□ -1.64
SEC9YGR009C SAP30P38429 201 aa4.79□□□□□ -1.64
SEC9YGR009C PPE1P38796 400 aa4.79□□□□□ -1.64
SEC9YGR009C YNG2P38806 282 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C MSS4P38994 779 aa4.79□□□□□ -1.64
SEC9YGR009C PSD1P39006 500 aa4.79□□□□□ -1.64
SEC9YGR009C COS4P43542 379 aa4.79□□□□□ -1.64
SEC9YGR009C FAR7P43592 221 aa4.79□□□□□ -1.64
SEC9YGR009C PSP1P50896 841 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C PRP38Q00723 242 aaPredicted RBP4.79□□□□□ -1.64
SEC9YGR009C HED1Q03937 162 aa4.79□□□□□ -1.64
SEC9YGR009C DPL1Q05567 589 aa4.79□□□□□ -1.64
SEC9YGR009C YLR283WQ05867 314 aa4.79□□□□□ -1.64
SEC9YGR009C SKG3Q06315 1026 aa4.79□□□□□ -1.64
SEC9YGR009C CDA1Q06702 301 aa4.79□□□□□ -1.64
SEC9YGR009C YLR040CQ07988 224 aa4.79□□□□□ -1.64
SEC9YGR009C UAF30Q08747 228 aa4.79□□□□□ -1.64
SEC9YGR009C FRE5Q08908 694 aa4.79□□□□□ -1.64
SEC9YGR009C GRE1Q08969 168 aa4.79□□□□□ -1.64
SEC9YGR009C GRE2Q12068 342 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C SFM1Q12314 213 aa4.79□□□□□ -1.64
SEC9YGR009C PAA1Q12447 191 aaKnown RBP4.79□□□□□ -1.64
SEC9YGR009C TY1B-DR4Q07793 1604 aa4.79□□□□□ -1.64
SEC9YGR009C SPT3P06844 337 aa4.78□□□□□ -1.64
SEC9YGR009C VAS1P07806 1104 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C RPL27AP0C2H6 136 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C RPL27BP0C2H7 136 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C HMG2P12684 1045 aa4.78□□□□□ -1.64
SEC9YGR009C RIT1P23796 513 aa4.78□□□□□ -1.64
SEC9YGR009C YCP4P25349 247 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C YCL068CP25593 260 aa4.78□□□□□ -1.64
SEC9YGR009C PER1P25625 357 aa4.78□□□□□ -1.64
SEC9YGR009C IDH1P28834 360 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SEC9YGR009C MCM4P30665 933 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C AST1P35183 429 aa4.78□□□□□ -1.64
SEC9YGR009C MAC1P35192 417 aa4.78□□□□□ -1.64
SEC9YGR009C SNU114P36048 1008 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C YBR284WP38150 797 aa4.78□□□□□ -1.64
SEC9YGR009C TSC10P38342 320 aa4.78□□□□□ -1.64
SEC9YGR009C RCK2P38623 610 aa4.78□□□□□ -1.64
SEC9YGR009C QNS1P38795 714 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C VMA13P41807 478 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C YJL132WP47014 750 aa4.78□□□□□ -1.64
SEC9YGR009C NBP35P52920 328 aa4.78□□□□□ -1.64
SEC9YGR009C AQR1P53943 586 aa4.78□□□□□ -1.64
SEC9YGR009C ORC3P54790 616 aa4.78□□□□□ -1.64
SEC9YGR009C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SEC9YGR009C NHP10Q03435 203 aa4.78□□□□□ -1.64
SEC9YGR009C GLO2Q05584 274 aa4.78□□□□□ -1.64
SEC9YGR009C RGC1Q06108 1083 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C GPN3Q06543 272 aa4.78□□□□□ -1.64
SEC9YGR009C CDD1Q06549 142 aa4.78□□□□□ -1.64
SEC9YGR009C RTT109Q07794 436 aa4.78□□□□□ -1.64
SEC9YGR009C YEH1Q07804 573 aa4.78□□□□□ -1.64
SEC9YGR009C AGC1Q12482 902 aa4.78□□□□□ -1.64
SEC9YGR009C VPS63O13549 108 aa4.78□□□□□ -1.64
SEC9YGR009C ATP6P00854 259 aa4.78□□□□□ -1.64
SEC9YGR009C RPS17AP02407 136 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C RPL6BP05739 176 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C YER152CP10356 443 aa4.78□□□□□ -1.64
SEC9YGR009C NHP6AP11632 93 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C GLN4P13188 809 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C RPS17BP14127 136 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C COQ1P18900 473 aa4.78□□□□□ -1.64
SEC9YGR009C ZRC1P20107 442 aa4.78□□□□□ -1.64
SEC9YGR009C URE2P23202 354 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C ERG6P25087 383 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C YCR051WP25631 222 aa4.78□□□□□ -1.64
SEC9YGR009C SBA1P28707 216 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C KIP1P28742 1111 aa4.78□□□□□ -1.64
SEC9YGR009C NDI1P32340 513 aa4.78□□□□□ -1.64
SEC9YGR009C MVD1P32377 396 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C GSH1P32477 678 aa4.78□□□□□ -1.64
SEC9YGR009C GCD7P32502 381 aaPredicted RBP4.78□□□□□ -1.64
SEC9YGR009C PRP21P32524 280 aaPredicted RBP4.78□□□□□ -1.64
SEC9YGR009C MSS1P32559 526 aaPredicted RBP4.78□□□□□ -1.64
SEC9YGR009C GSP1P32835 219 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C GSP2P32836 220 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C CLG1P35190 452 aa4.78□□□□□ -1.64
SEC9YGR009C ICS2P38284 255 aa4.78□□□□□ -1.64
SEC9YGR009C YHR202WP38887 602 aa4.78□□□□□ -1.64
SEC9YGR009C MET28P40573 187 aa4.78□□□□□ -1.64
SEC9YGR009C YJL181WP46987 611 aa4.78□□□□□ -1.64
SEC9YGR009C ALY2P47029 1046 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms