RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	MET14	Q02196	202 aa		4.09	□□□□□ -1.76
TPA1	YER049W	SNU56	Q03782	492 aa	Known RBP	4.09	□□□□□ -1.76
TPA1	YER049W	CSN9	Q03981	162 aa		4.09	□□□□□ -1.76
TPA1	YER049W	NHX1	Q04121	633 aa		4.09	□□□□□ -1.76
TPA1	YER049W	CDD1	Q06549	142 aa		4.09	□□□□□ -1.76
TPA1	YER049W	RSB1	Q08417	382 aa		4.09	□□□□□ -1.76
TPA1	YER049W	GCN3	P14741	305 aa		4.08	□□□□□ -1.76
TPA1	YER049W	PHO81	P17442	1178 aa		4.08	□□□□□ -1.76
TPA1	YER049W	GLN3	P18494	730 aa		4.08	□□□□□ -1.76
TPA1	YER049W	RVS161	P25343	265 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	BRF1	P29056	596 aa		4.08	□□□□□ -1.76
TPA1	YER049W	ITR2	P30606	609 aa		4.08	□□□□□ -1.76
TPA1	YER049W	APE2	P32454	952 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	NGG1	P32494	702 aa		4.08	□□□□□ -1.76
TPA1	YER049W	MTC2	P34246	357 aa		4.08	□□□□□ -1.76
TPA1	YER049W	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
TPA1	YER049W	BIR1	P47134	954 aa		4.08	□□□□□ -1.76
TPA1	YER049W	YNL095C	P53932	642 aa		4.08	□□□□□ -1.76
TPA1	YER049W	ORC3	P54790	616 aa		4.08	□□□□□ -1.76
TPA1	YER049W	LSM3	P57743	89 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	SVL3	Q03088	825 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	YMR099C	Q03161	297 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	GAS3	Q03655	524 aa		4.08	□□□□□ -1.76
TPA1	YER049W	SSY1	Q03770	852 aa		4.08	□□□□□ -1.76
TPA1	YER049W	ECM38	Q05902	660 aa	Predicted RBP	4.08	□□□□□ -1.76
TPA1	YER049W	ULA1	Q12059	462 aa		4.08	□□□□□ -1.76
TPA1	YER049W	CTF3	Q12748	733 aa		4.08	□□□□□ -1.76
TPA1	YER049W	EFG1	Q3E705	233 aa	Known RBP	4.08	□□□□□ -1.76
TPA1	YER049W	CBP2	P03874	630 aa	Predicted RBP	4.07	□□□□□ -1.76
TPA1	YER049W	TPK3	P05986	398 aa		4.07	□□□□□ -1.76
TPA1	YER049W	WHI2	P12611	486 aa		4.07	□□□□□ -1.76
TPA1	YER049W	NMT1	P14743	455 aa		4.07	□□□□□ -1.76
TPA1	YER049W	MSS116	P15424	664 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	THR1	P17423	357 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	VPS3	P23643	1011 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YCR090C	P25654	182 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	HSP78	P33416	811 aa		4.07	□□□□□ -1.76
TPA1	YER049W	ASK1	P35734	292 aa		4.07	□□□□□ -1.76
TPA1	YER049W	ROT2	P38138	954 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YAP1801	P38856	637 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YER186C	P40101	306 aa		4.07	□□□□□ -1.76
TPA1	YER049W	ATM1	P40416	690 aa		4.07	□□□□□ -1.76
TPA1	YER049W	COA1	P40452	197 aa		4.07	□□□□□ -1.76
TPA1	YER049W	PRM2	P40534	656 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RTT101	P47050	842 aa		4.07	□□□□□ -1.76
TPA1	YER049W	GND2	P53319	492 aa		4.07	□□□□□ -1.76
TPA1	YER049W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TPA1	YER049W	GAL83	Q04739	417 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RSC3	Q06639	885 aa		4.07	□□□□□ -1.76
TPA1	YER049W	APC5	Q08683	685 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YOR389W	Q08912	624 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RCN2	Q12044	265 aa		4.07	□□□□□ -1.76
TPA1	YER049W	GPR1	Q12361	961 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YPL247C	Q12523	523 aa		4.07	□□□□□ -1.76
TPA1	YER049W	MF(ALPHA)1	P01149	165 aa		4.07	□□□□□ -1.76
TPA1	YER049W	TPK1	P06244	397 aa		4.07	□□□□□ -1.76
TPA1	YER049W	CCA1	P21269	546 aa		4.07	□□□□□ -1.76
TPA1	YER049W	UBA1	P22515	1024 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	CMK2	P22517	447 aa		4.07	□□□□□ -1.76
TPA1	YER049W	TRX2	P22803	104 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SAC1	P32368	623 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	YBR139W	P38109	508 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YBL029W	P38201	376 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RFS1	P38234	210 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	YHR112C	P38716	378 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SSZ1	P38788	538 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	YHR218W	P38899	603 aa		4.07	□□□□□ -1.76
TPA1	YER049W	PRM9	P39551	298 aa		4.07	□□□□□ -1.76
TPA1	YER049W	KRE29	P40026	464 aa		4.07	□□□□□ -1.76
TPA1	YER049W	THO1	P40040	218 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	ELP2	P42935	788 aa		4.07	□□□□□ -1.76
TPA1	YER049W	NET1	P47035	1189 aa		4.07	□□□□□ -1.76
TPA1	YER049W	PSP1	P50896	841 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	PEX8	P53248	589 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SWP1	Q02795	286 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RLI1	Q03195	608 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	MMT1	Q03218	510 aa		4.07	□□□□□ -1.76
TPA1	YER049W	RSN1	Q03516	953 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SKY1	Q03656	742 aa		4.07	□□□□□ -1.76
TPA1	YER049W	HPT1	Q04178	221 aa	Known RBP	4.07	□□□□□ -1.76
TPA1	YER049W	GRX8	Q05926	109 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YPR196W	Q06595	470 aa		4.07	□□□□□ -1.76
TPA1	YER049W	REH1	Q06709	432 aa		4.07	□□□□□ -1.76
TPA1	YER049W	FMP45	Q07651	309 aa		4.07	□□□□□ -1.76
TPA1	YER049W	YOL159C	Q08300	171 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SCM3	Q12334	223 aa		4.07	□□□□□ -1.76
TPA1	YER049W	BRR1	Q99177	341 aa	Predicted RBP	4.07	□□□□□ -1.76
TPA1	YER049W	SAS5	Q99314	248 aa		4.07	□□□□□ -1.76
TPA1	YER049W	SPS1	P08458	490 aa		4.06	□□□□□ -1.76
TPA1	YER049W	ERG20	P08524	352 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	HMG2	P12684	1045 aa		4.06	□□□□□ -1.76
TPA1	YER049W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	POL30	P15873	258 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	CAD1	P24813	409 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	PCL2	P25693	308 aa		4.06	□□□□□ -1.76
TPA1	YER049W	YUR1	P26725	428 aa		4.06	□□□□□ -1.76
TPA1	YER049W	TOM20	P35180	183 aa		4.06	□□□□□ -1.76
TPA1	YER049W	KAE1	P36132	386 aa		4.06	□□□□□ -1.76
TPA1	YER049W	SRP68	P38687	599 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms