RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS72	YDR485C	INP53	Q12271	1107 aa		5.75	□□□□□ -1.49
VPS72	YDR485C	MVD1	P32377	396 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	HIR2	P32480	875 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	PCA1	P38360	1216 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	ALD5	P40047	520 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	RPN11	P43588	306 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	AIM22	P47051	409 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	UBP16	Q02863	499 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	DCS1	Q06151	350 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	DIB1	Q06819	143 aa	Predicted RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	MLH3	Q12083	715 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	VAM3	Q12241	283 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	RBD2	Q12270	262 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	NTO1	Q12311	748 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	CDC37	P06101	506 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	LEU4	P06208	619 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	COT1	P32798	439 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	ARC19	P33204	171 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	YMR147W	P40218	223 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	GCN20	P43535	752 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	PRY1	P47032	299 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	BIO3	P50277	480 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	SLG1	P54867	378 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	RRB1	Q04225	511 aa	Known RBP	5.74	□□□□□ -1.49
VPS72	YDR485C	YDR109C	Q04585	715 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	BOP2	Q06150	570 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	CRT10	Q08226	957 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	YPL216W	Q08964	1102 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	RRD2	Q12461	358 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	MTR10	Q99189	972 aa		5.74	□□□□□ -1.49
VPS72	YDR485C	GSH1	P32477	678 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	AIM10	P39965	576 aa	Known RBP	5.73	□□□□□ -1.49
VPS72	YDR485C	FAR3	P46671	204 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	TRM13	Q12383	476 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	PET111	P08468	800 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	YPK1	P12688	680 aa	Known RBP	5.73	□□□□□ -1.49
VPS72	YDR485C	PET18	P25362	215 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	RME1	P32338	300 aa	Known RBP	5.73	□□□□□ -1.49
VPS72	YDR485C	TRM2	P33753	639 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	SAF1	P38352	637 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	PEX18	P38855	283 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	ULP2	P40537	1034 aa	Predicted RBP	5.73	□□□□□ -1.49
VPS72	YDR485C	GEP3	Q08622	556 aa		5.73	□□□□□ -1.49
VPS72	YDR485C	RPB4	P20433	221 aa	Predicted RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	MCX1	P38323	520 aa	Predicted RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	MPP6	P53725	186 aa	Predicted RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	ORC3	P54790	616 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	STD1	Q02794	444 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	SPO19	Q03029	223 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	EKI1	Q03764	534 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	MDM30	Q05930	598 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	CYK3	Q07533	885 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	DIS3	Q08162	1001 aa	Known RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	BUG1	Q12191	341 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	YDL177C	Q12257	170 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	HXK2	P04807	486 aa	Known RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	RNA1	P11745	407 aa	Known RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	GAL3	P13045	520 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	CDC42	P19073	191 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	MCM4	P30665	933 aa	Known RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	YHR210C	P38893	341 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	YIR042C	P40586	236 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	LIA1	P47120	325 aa	Known RBP	5.72	□□□□□ -1.49
VPS72	YDR485C	UBC11	P52492	156 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	BUD17	P53727	317 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	CSI1	Q04368	295 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	YLL007C	Q07799	665 aa		5.72	□□□□□ -1.49
VPS72	YDR485C	YCL068C	P25593	260 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	YMR124W	P39523	943 aa	Known RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	RIB4	P50861	169 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	MFM1	Q02783	413 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	NOP12	Q08208	459 aa	Known RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	LCB4	Q12246	624 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	MDM20	Q12387	796 aa	Known RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	STE2	D6VTK4	431 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	ALG1	P16661	449 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	UGA1	P17649	471 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	FUB1	P25659	250 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	ASF2	P32448	525 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	ETP1	P38748	585 aa	Known RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	GTO1	P48239	356 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	YGL108C	P53139	140 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	TIM21	P53220	239 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	RTT102	P53330	157 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	DBP6	P53734	629 aa	Known RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	RPS10A	Q08745	105 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	RKM1	Q08961	583 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	MRH1	Q12117	320 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS72	YDR485C	MED2	Q12124	431 aa		5.71	□□□□□ -1.5
VPS72	YDR485C	SIR3	P06701	978 aa		5.7	□□□□□ -1.5
VPS72	YDR485C	SMY1	P32364	656 aa	Known RBP	5.7	□□□□□ -1.5
VPS72	YDR485C	RIM1	P32445	135 aa	Known RBP	5.7	□□□□□ -1.5
VPS72	YDR485C	RPS10B	P46784	105 aa	Known RBP	5.7	□□□□□ -1.5
VPS72	YDR485C	MUP1	P50276	574 aa		5.7	□□□□□ -1.5
VPS72	YDR485C	MND1	P53102	219 aa		5.7	□□□□□ -1.5
VPS72	YDR485C	ERV41	Q04651	352 aa		5.7	□□□□□ -1.5
VPS72	YDR485C	SLK19	Q08581	821 aa	Known RBP	5.7	□□□□□ -1.5
VPS72	YDR485C	YOR352W	Q08816	343 aa		5.7	□□□□□ -1.5
VPS72	YDR485C	NCE102	Q12207	173 aa	RIP-Chip data	5.7	□□□□□ -1.5	not detected
VPS72	YDR485C	CHO2	P05374	869 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms