RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
TRP1YDR007W BUD3P25558 1636 aa5.92□□□□□ -1.46
TRP1YDR007W IQG1Q12280 1495 aa5.91□□□□□ -1.46
TRP1YDR007W MAK32P23060 363 aa5.91□□□□□ -1.46
TRP1YDR007W YCR006CP25350 157 aa5.91□□□□□ -1.46
TRP1YDR007W GSY2P27472 705 aa5.91□□□□□ -1.46
TRP1YDR007W YME2P32843 850 aa5.91□□□□□ -1.46
TRP1YDR007W RRP1P35178 278 aaPredicted RBP5.91□□□□□ -1.46
TRP1YDR007W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
TRP1YDR007W APE4P38821 490 aa5.91□□□□□ -1.46
TRP1YDR007W PAC2P39937 518 aa5.91□□□□□ -1.46
TRP1YDR007W JEM1P40358 645 aa5.91□□□□□ -1.46
TRP1YDR007W HXT14P42833 540 aa5.91□□□□□ -1.46
TRP1YDR007W HOS2P53096 452 aaPredicted RBP5.91□□□□□ -1.46
TRP1YDR007W VPS9P54787 451 aa5.91□□□□□ -1.46
TRP1YDR007W ARO80Q04052 950 aa5.91□□□□□ -1.46
TRP1YDR007W YLR455WQ06188 304 aa5.91□□□□□ -1.46
TRP1YDR007W TEN1Q07921 160 aa5.91□□□□□ -1.46
TRP1YDR007W CFT2Q12102 859 aaPredicted RBP5.91□□□□□ -1.46
TRP1YDR007W RDL1Q12305 139 aaKnown RBP5.91□□□□□ -1.46
TRP1YDR007W PNS1Q12412 539 aa5.91□□□□□ -1.46
TRP1YDR007W CHO1P08456 276 aa5.9□□□□□ -1.46
TRP1YDR007W ILS1P09436 1072 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W TKL1P23254 680 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W CDC10P25342 322 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W PRD1P25375 712 aa5.9□□□□□ -1.46
TRP1YDR007W ECM32P32644 1121 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W APE3P37302 537 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W TSC10P38342 320 aa5.9□□□□□ -1.46
TRP1YDR007W IMD2P38697 523 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W CDC1P40986 491 aa5.9□□□□□ -1.46
TRP1YDR007W APT1P49435 187 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W IMD3P50095 523 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W FMP30Q02883 468 aa5.9□□□□□ -1.46
TRP1YDR007W YMR178WQ03219 274 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W RRB1Q04225 511 aaKnown RBP5.9□□□□□ -1.46
TRP1YDR007W AIM32Q04689 311 aa5.9□□□□□ -1.46
TRP1YDR007W SNF2P22082 1703 aa5.9□□□□□ -1.47
TRP1YDR007W RNR2P09938 399 aaKnown RBP5.89□□□□□ -1.47
TRP1YDR007W STE50P25344 346 aa5.89□□□□□ -1.47
TRP1YDR007W BOS1P25385 244 aa5.89□□□□□ -1.47
TRP1YDR007W YME1P32795 747 aa5.89□□□□□ -1.47
TRP1YDR007W SEC66P33754 206 aa5.89□□□□□ -1.47
TRP1YDR007W YBL055CP34220 418 aaPredicted RBP5.89□□□□□ -1.47
TRP1YDR007W APD1P38281 316 aa5.89□□□□□ -1.47
TRP1YDR007W ERV46P39727 415 aa5.89□□□□□ -1.47
TRP1YDR007W ZIM17P42844 174 aa5.89□□□□□ -1.47
TRP1YDR007W ILM1P47155 203 aa5.89□□□□□ -1.47
TRP1YDR007W ORC5P50874 479 aa5.89□□□□□ -1.47
TRP1YDR007W YNL247WP53852 767 aaKnown RBP5.89□□□□□ -1.47
TRP1YDR007W BNI5P53890 448 aaKnown RBP5.89□□□□□ -1.47
TRP1YDR007W EMI2Q04409 500 aaKnown RBP5.89□□□□□ -1.47
TRP1YDR007W SLK19Q08581 821 aaKnown RBP5.89□□□□□ -1.47
TRP1YDR007W LYS2P07702 1392 aa5.89□□□□□ -1.47
TRP1YDR007W DAL5P15365 543 aa5.88□□□□□ -1.47
TRP1YDR007W SAC1P32368 623 aaKnown RBP5.88□□□□□ -1.47
TRP1YDR007W NUP133P36161 1157 aa5.88□□□□□ -1.47
TRP1YDR007W DBP8P38719 431 aa5.88□□□□□ -1.47
TRP1YDR007W SPT8P38915 602 aa5.88□□□□□ -1.47
TRP1YDR007W CIN1P40987 1014 aa5.88□□□□□ -1.47
TRP1YDR007W YRB1P41920 201 aaKnown RBP5.88□□□□□ -1.47
TRP1YDR007W STB2P46679 850 aa5.88□□□□□ -1.47
TRP1YDR007W DLD2P46681 530 aaKnown RBP5.88□□□□□ -1.47
TRP1YDR007W ERG26P53199 349 aaKnown RBP5.88□□□□□ -1.47
TRP1YDR007W ASI1P54074 624 aa5.88□□□□□ -1.47
TRP1YDR007W RPA49Q01080 415 aaPredicted RBP5.88□□□□□ -1.47
TRP1YDR007W GYL1Q04322 720 aa5.88□□□□□ -1.47
TRP1YDR007W VTA1Q06263 330 aa5.88□□□□□ -1.47
TRP1YDR007W RTT109Q07794 436 aa5.88□□□□□ -1.47
TRP1YDR007W ABP140Q08641 628 aaKnown RBP5.88□□□□□ -1.47
TRP1YDR007W BNR1P40450 1375 aa5.88□□□□□ -1.47
TRP1YDR007W YSP2Q06681 1438 aa5.88□□□□□ -1.47
TRP1YDR007W YER145C-AA0A023PYF4 145 aa5.87□□□□□ -1.47
TRP1YDR007W RPL3P14126 387 aaKnown RBP5.87□□□□□ -1.47
TRP1YDR007W MNE1P24720 663 aa5.87□□□□□ -1.47
TRP1YDR007W VPH1P32563 840 aaKnown RBP5.87□□□□□ -1.47
TRP1YDR007W RPL32P38061 130 aaKnown RBP5.87□□□□□ -1.47
TRP1YDR007W MSR1P38714 643 aa5.87□□□□□ -1.47
TRP1YDR007W SNU56Q03782 492 aaKnown RBP5.87□□□□□ -1.47
TRP1YDR007W ROY1Q04847 553 aa5.87□□□□□ -1.47
TRP1YDR007W PDR8Q06149 701 aa5.87□□□□□ -1.47
TRP1YDR007W ECM30Q06673 1274 aa5.87□□□□□ -1.47
TRP1YDR007W AFI1Q99222 893 aa5.87□□□□□ -1.47
TRP1YDR007W SAC3P46674 1301 aa5.87□□□□□ -1.47
TRP1YDR007W LTE1P07866 1435 aa5.86□□□□□ -1.47
TRP1YDR007W SIR4P11978 1358 aa5.86□□□□□ -1.47
TRP1YDR007W SWI1P09547 1314 aa5.86□□□□□ -1.47
TRP1YDR007W RPL5P26321 297 aaKnown RBP5.86□□□□□ -1.47
TRP1YDR007W URA7P28274 579 aaKnown RBP5.86□□□□□ -1.47
TRP1YDR007W PIM1P36775 1133 aa5.86□□□□□ -1.47
TRP1YDR007W ANS1P38832 159 aa5.86□□□□□ -1.47
TRP1YDR007W CTK3P46963 296 aaPredicted RBP5.86□□□□□ -1.47
TRP1YDR007W MNP1P53163 194 aaPredicted RBP5.86□□□□□ -1.47
TRP1YDR007W BTN2P53286 410 aa5.86□□□□□ -1.47
TRP1YDR007W ARX1Q03862 593 aaKnown RBP5.86□□□□□ -1.47
TRP1YDR007W BSP1Q06604 576 aa5.86□□□□□ -1.47
TRP1YDR007W CMS1Q07897 291 aaKnown RBP5.86□□□□□ -1.47
TRP1YDR007W MCH4Q08268 501 aa5.86□□□□□ -1.47
TRP1YDR007W SUT2Q12286 268 aa5.86□□□□□ -1.47
TRP1YDR007W YDL007C-AQ2V2Q0 85 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms