RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	YLH47	Q06493	454 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	HBT1	Q07653	1046 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	YLR040C	Q07988	224 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	ETT1	Q08421	412 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	RPS10A	Q08745	105 aa	Predicted RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	APL5	Q08951	932 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	VAM3	Q12241	283 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	AHA1	Q12449	350 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	SPS4	P09937	338 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	SRV2	P17555	526 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	GEX1	P25596	615 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	GAC1	P28006	793 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	RAD14	P28519	371 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	MRPL40	P36534	297 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	YHR131C	P38835	850 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	VHS2	P40463	436 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	MKT1	P40850	830 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	YFL015C	P43578	164 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	AIP1	P46680	615 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	RPS10B	P46784	105 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	ATG27	P46989	271 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	PHO23	P50947	330 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	YGL108C	P53139	140 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	ERG26	P53199	349 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	ARP5	P53946	755 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	SLG1	P54867	378 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	AAT1	Q01802	451 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	GFD1	Q04839	188 aa	Known RBP	4.23	□□□□□ -1.73
RKM3	YBR030W	ARO10	Q06408	635 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	YFH1	Q07540	174 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	MED2	Q12124	431 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	NBL1	Q3E7Y6	73 aa		4.23	□□□□□ -1.73
RKM3	YBR030W	PRP2	P20095	876 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	UBA1	P22515	1024 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	YJU2	P28320	278 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	HRR25	P29295	494 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	HIR2	P32480	875 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	VPS17	P32913	551 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	ANS1	P38832	159 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	YPR003C	P53394	754 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	KTR5	P53966	522 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	RAD34	Q06665	692 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	CYK3	Q07533	885 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	RTC1	Q08281	1341 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	CAR1	P00812	333 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	CBR1	P38626	284 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	DBP8	P38719	431 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	KEL1	P38853	1164 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	RIX1	P38883	763 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	VPS45	P38932	577 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	MBB1	P39534	108 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	YGL117W	P53133	265 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	OCA2	P53949	197 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	RSM23	Q01163	450 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	YMR178W	Q03219	274 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	EMI2	Q04409	500 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	ECM30	Q06673	1274 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	DIS3	Q08162	1001 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	MDM20	Q12387	796 aa	Known RBP	4.22	□□□□□ -1.73
RKM3	YBR030W	MTR10	Q99189	972 aa		4.22	□□□□□ -1.73
RKM3	YBR030W	COR1	P07256	457 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	HCM1	P25364	564 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	CTS1	P29029	562 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	MCM4	P30665	933 aa	Known RBP	4.21	□□□□□ -1.74
RKM3	YBR030W	ASC1	P38011	319 aa	Known RBP	4.21	□□□□□ -1.74
RKM3	YBR030W	YMC2	P38087	329 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	MMS4	P38257	691 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	RPN14	P53196	417 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	UTP6	Q02354	440 aa	Known RBP	4.21	□□□□□ -1.74
RKM3	YBR030W	RNH1	Q04740	348 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	MSC3	Q05812	728 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	AIM39	Q08223	395 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	SFG1	Q12507	346 aa		4.21	□□□□□ -1.74
RKM3	YBR030W	GPH1	P06738	902 aa	Known RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	STE3	P06783	470 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	ADE5,7	P07244	802 aa	Known RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	CBP1	P07252	654 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	IME2	P32581	645 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	MTR2	P34232	184 aa	Known RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	GLG1	P36143	616 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	SUL1	P38359	859 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	PCL5	P38794	229 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	YMR147W	P40218	223 aa	Known RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	TDA10	P42938	290 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	COP1	P53622	1201 aa	Known RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	CPR8	P53728	308 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	PFA5	Q03289	374 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	VPS20	Q04272	221 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	NDL1	Q06568	189 aa		4.2	□□□□□ -1.74
RKM3	YBR030W	NCE102	Q12207	173 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
RKM3	YBR030W	PFK27	Q12471	397 aa	Predicted RBP	4.2	□□□□□ -1.74
RKM3	YBR030W	PDE2	P06776	526 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	PEP4	P07267	405 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	RIP1	P08067	215 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	MRP2	P10663	115 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	SCH9	P11792	824 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	RAP1	P11938	827 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	TKL1	P23254	680 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	NDI1	P32340	513 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	EBP2	P36049	427 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms