RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A FAR3P46671 204 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A YDL009CQ12210 107 aa2.46□□□□□ -2.02
YBR012W-AYBR012W-A HEM2P05373 342 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A PMR1P13586 950 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A SUI2P20459 304 aaKnown RBP2.45□□□□□ -2.02
YBR012W-AYBR012W-A PAH1P32567 862 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A SSE2P32590 693 aaKnown RBP2.45□□□□□ -2.02
YBR012W-AYBR012W-A PMU1P36069 295 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A NUP133P36161 1157 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A SHO1P40073 367 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A SYO1Q07395 620 aa2.45□□□□□ -2.02
YBR012W-AYBR012W-A AMD1P15274 810 aaKnown RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A GFD2P25370 566 aaKnown RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A SGF29P25554 259 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A RRT2P38332 387 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A ALG8P40351 577 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A DRN1P53255 507 aaKnown RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A YGR126WP53274 230 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A RLI1Q03195 608 aaKnown RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A PAL1Q05518 499 aaKnown RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A MRPL51Q06090 140 aaPredicted RBP2.44□□□□□ -2.02
YBR012W-AYBR012W-A VPS74Q06385 345 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A HNT3Q08702 217 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A NCE102Q12207 173 aaRIP-Chip data2.44□□□□□ -2.02not detected
YBR012W-AYBR012W-A YPT6Q99260 215 aa2.44□□□□□ -2.02
YBR012W-AYBR012W-A SEC53P07283 254 aaKnown RBP2.43□□□□□ -2.02
YBR012W-AYBR012W-A LPD1P09624 499 aaKnown RBP2.43□□□□□ -2.02
YBR012W-AYBR012W-A EXO70P19658 623 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A PEP3P27801 918 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A UPF3P48412 387 aaKnown RBP2.43□□□□□ -2.02
YBR012W-AYBR012W-A MRX6P48564 524 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A MSO1P53604 210 aaKnown RBP2.43□□□□□ -2.02
YBR012W-AYBR012W-A COQ9Q05779 260 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A BNA5Q05979 453 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A FMP40Q08968 688 aaPredicted RBP2.43□□□□□ -2.02
YBR012W-AYBR012W-A YCL021W-AQ96VH3 125 aa2.43□□□□□ -2.02
YBR012W-AYBR012W-A RAD52P06778 471 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A ART10P18634 518 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A ELO2P25358 347 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A YCR022CP25620 114 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A CCT6P39079 546 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A NOP16P40007 231 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A DOT5P40553 215 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A SCD6P45978 349 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YBR012W-AYBR012W-A YJR154WP47181 346 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A APT1P49435 187 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A IMD4P50094 524 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A BTN2P53286 410 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A RBG2P53295 368 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A IRC15Q02733 499 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A YEH1Q07804 573 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A NMD4Q12129 218 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A NOP58Q12499 511 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A HSH49Q99181 213 aaPredicted RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A GAL80P04387 435 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A PEP4P07267 405 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A PUT3P25502 979 aaPredicted RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A FUN19P28003 413 aaPredicted RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A YEL045CP32616 141 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A FRE1P32791 686 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A PAD1P33751 242 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YBR012W-AYBR012W-A SEF1P34228 1148 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A REG2P38232 338 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A FLC2P39719 783 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A PRE5P40302 234 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A ALG5P40350 334 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A TMA108P40462 946 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A ELP2P42935 788 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A WSC2P53832 503 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A SLD5Q03406 294 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A IVY1Q04934 453 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A BSC6Q08280 497 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A RLM1Q12224 676 aa2.42□□□□□ -2.02
YBR012W-AYBR012W-A LSP1Q12230 341 aaKnown RBP2.42□□□□□ -2.02
YBR012W-AYBR012W-A SPT15P13393 240 aaKnown RBP2.41□□□□□ -2.02
YBR012W-AYBR012W-A CBS1P14066 229 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A YCR007CP25354 239 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A DEG1P31115 442 aaKnown RBP2.41□□□□□ -2.02
YBR012W-AYBR012W-A TCD2P36101 447 aaKnown RBP2.41□□□□□ -2.02
YBR012W-AYBR012W-A SRO77P38163 1010 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A MSR1P38714 643 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A YHR210CP38893 341 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A CIN4P39110 191 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A SDT1P53078 280 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A VPS38Q05919 439 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A THP1Q08231 455 aa2.41□□□□□ -2.02
YBR012W-AYBR012W-A RRP12Q12754 1228 aaKnown RBP2.41□□□□□ -2.02
YBR012W-AYBR012W-A SEM1O94742 89 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A SUP35P05453 685 aaKnown RBP2.4□□□□□ -2.03
YBR012W-AYBR012W-A CPR1P14832 162 aaKnown RBP2.4□□□□□ -2.03
YBR012W-AYBR012W-A UTR4P32626 227 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A YBL059WP34224 193 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A HAT2P39984 401 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A AIM22P47051 409 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A VID30P53076 958 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A ZPR1P53303 486 aaKnown RBP2.4□□□□□ -2.03
YBR012W-AYBR012W-A TOF2Q02208 771 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A RRN11Q04712 507 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A PHO92Q06390 306 aa2.4□□□□□ -2.03
YBR012W-AYBR012W-A BUD21Q08492 214 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms