RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W ATG10Q07879 167 aa6.56□□□□□ -1.36
SWD1YAR003W ART10P18634 518 aaKnown RBP6.55□□□□□ -1.36
SWD1YAR003W RSC6P25632 483 aa6.55□□□□□ -1.36
SWD1YAR003W CCR4P31384 837 aaKnown RBP6.55□□□□□ -1.36
SWD1YAR003W MPT5P39016 859 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
SWD1YAR003W YJL070CP40361 888 aa6.55□□□□□ -1.36
SWD1YAR003W COA1P40452 197 aa6.55□□□□□ -1.36
SWD1YAR003W RLP7P40693 322 aaKnown RBP6.55□□□□□ -1.36
SWD1YAR003W VMA13P41807 478 aaKnown RBP6.55□□□□□ -1.36
SWD1YAR003W CCT7P42943 550 aaKnown RBP6.55□□□□□ -1.36
SWD1YAR003W BIR1P47134 954 aa6.55□□□□□ -1.36
SWD1YAR003W ZRG17P53735 605 aa6.55□□□□□ -1.36
SWD1YAR003W CUS2P53830 285 aaPredicted RBP6.55□□□□□ -1.36
SWD1YAR003W SPC24Q04477 213 aa6.55□□□□□ -1.36
SWD1YAR003W GTB1Q04924 702 aa6.55□□□□□ -1.36
SWD1YAR003W VAM6Q07468 1049 aa6.55□□□□□ -1.36
SWD1YAR003W YOL019WQ08157 551 aa6.55□□□□□ -1.36
SWD1YAR003W TRM8Q12009 286 aa6.55□□□□□ -1.36
SWD1YAR003W YPL247CQ12523 523 aa6.55□□□□□ -1.36
SWD1YAR003W BRR1Q99177 341 aaPredicted RBP6.55□□□□□ -1.36
SWD1YAR003W YAR066WP0CX18 203 aa6.54□□□□□ -1.36
SWD1YAR003W YHR214WP0CX19 203 aa6.54□□□□□ -1.36
SWD1YAR003W RFA2P26754 273 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W CRM1P30822 1084 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W ATP11P32453 318 aa6.54□□□□□ -1.36
SWD1YAR003W THI80P35202 319 aa6.54□□□□□ -1.36
SWD1YAR003W NUP120P35729 1037 aa6.54□□□□□ -1.36
SWD1YAR003W RIM11P38615 370 aa6.54□□□□□ -1.36
SWD1YAR003W RFC3P38629 340 aa6.54□□□□□ -1.36
SWD1YAR003W YHR020WP38708 688 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W RRP3P38712 501 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W HSE1P38753 452 aa6.54□□□□□ -1.36
SWD1YAR003W TIM17P39515 158 aa6.54□□□□□ -1.36
SWD1YAR003W NBP35P52920 328 aa6.54□□□□□ -1.36
SWD1YAR003W YNL260CP53846 198 aa6.54□□□□□ -1.36
SWD1YAR003W YML131WQ03102 365 aa6.54□□□□□ -1.36
SWD1YAR003W YDL121CQ07541 149 aa6.54□□□□□ -1.36
SWD1YAR003W RPN8Q08723 338 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W YDR056CQ12025 205 aa6.54□□□□□ -1.36
SWD1YAR003W TY1A-NL1Q12391 440 aaKnown RBP6.54□□□□□ -1.36
SWD1YAR003W SRN2Q99176 213 aa6.54□□□□□ -1.36
SWD1YAR003W CAR1P00812 333 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W HCM1P25364 564 aa6.53□□□□□ -1.36
SWD1YAR003W MVD1P32377 396 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W SPR1P32603 445 aa6.53□□□□□ -1.36
SWD1YAR003W TCD2P36101 447 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W CTP1P38152 299 aa6.53□□□□□ -1.36
SWD1YAR003W FZO1P38297 855 aa6.53□□□□□ -1.36
SWD1YAR003W NPT1P39683 429 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W GIM4P40005 111 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W ARB1P40024 610 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W YNL010WP53981 241 aaKnown RBP6.53□□□□□ -1.36
SWD1YAR003W YPL113CQ02961 396 aa6.53□□□□□ -1.36
SWD1YAR003W YMR102CQ03177 834 aa6.53□□□□□ -1.36
SWD1YAR003W FMN1Q03778 218 aa6.53□□□□□ -1.36
SWD1YAR003W RIF2Q06208 395 aa6.53□□□□□ -1.36
SWD1YAR003W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
SWD1YAR003W VPS68Q12016 184 aa6.53□□□□□ -1.36
SWD1YAR003W GLO4Q12320 285 aa6.53□□□□□ -1.36
SWD1YAR003W COX3P00420 269 aa6.52□□□□□ -1.37
SWD1YAR003W TRP3P00937 484 aa6.52□□□□□ -1.37
SWD1YAR003W CDC21P06785 304 aa6.52□□□□□ -1.37
SWD1YAR003W COS2P0CX12 379 aa6.52□□□□□ -1.37
SWD1YAR003W COS3P0CX13 379 aa6.52□□□□□ -1.37
SWD1YAR003W PRP6P19735 899 aaPredicted RBP6.52□□□□□ -1.37
SWD1YAR003W PWP1P21304 576 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W ARG1P22768 420 aa6.52□□□□□ -1.37
SWD1YAR003W BUB2P26448 306 aaPredicted RBP6.52□□□□□ -1.37
SWD1YAR003W RPS1AP33442 255 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W MUM2P38236 366 aa6.52□□□□□ -1.37
SWD1YAR003W BAT1P38891 393 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W EMP65P40085 556 aa6.52□□□□□ -1.37
SWD1YAR003W NEO1P40527 1151 aa6.52□□□□□ -1.37
SWD1YAR003W COS4P43542 379 aa6.52□□□□□ -1.37
SWD1YAR003W TMA22P47089 198 aaPredicted RBP6.52□□□□□ -1.37
SWD1YAR003W NNF2P53253 936 aa6.52□□□□□ -1.37
SWD1YAR003W SNO2P53823 222 aa6.52□□□□□ -1.37
SWD1YAR003W REX2P54964 269 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W HEL2Q05580 639 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W PLB3Q08108 686 aa6.52□□□□□ -1.37
SWD1YAR003W YPL225WQ08971 146 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W SAM4Q08985 325 aaKnown RBP6.52□□□□□ -1.37
SWD1YAR003W YLR049CQ12110 428 aa6.52□□□□□ -1.37
SWD1YAR003W UPC2Q12151 913 aa6.52□□□□□ -1.37
SWD1YAR003W RRP42Q12277 265 aaPredicted RBP6.52□□□□□ -1.37
SWD1YAR003W YBL113CQ7M4S9 792 aa6.52□□□□□ -1.37
SWD1YAR003W INH1P01097 85 aa6.51□□□□□ -1.37
SWD1YAR003W GUK1P15454 187 aaKnown RBP6.51□□□□□ -1.37
SWD1YAR003W MET8P15807 274 aa6.51□□□□□ -1.37
SWD1YAR003W RML2P32611 393 aa6.51□□□□□ -1.37
SWD1YAR003W CUE2P36075 443 aaKnown RBP6.51□□□□□ -1.37
SWD1YAR003W ARN1P38731 627 aa6.51□□□□□ -1.37
SWD1YAR003W YHL008CP38750 627 aa6.51□□□□□ -1.37
SWD1YAR003W FKH2P41813 862 aa6.51□□□□□ -1.37
SWD1YAR003W YJR149WP47177 404 aa6.51□□□□□ -1.37
SWD1YAR003W MDM34P53083 459 aa6.51□□□□□ -1.37
SWD1YAR003W CWC24P53769 259 aa6.51□□□□□ -1.37
SWD1YAR003W TRM12Q04235 462 aa6.51□□□□□ -1.37
SWD1YAR003W NAG1Q8TGN9 163 aa6.51□□□□□ -1.37
SWD1YAR003W SAS5Q99314 248 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms