RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 ADCY7P51828 1080 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 CUL4AQ13619 759 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.57
HDLBP-209ENST00000422933 CD99L2Q8TCZ2 262 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 ZNF296Q8WUU4 475 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-209ENST00000422933 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
HDLBP-209ENST00000422933 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 PLXNB2O15031 1838 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 SPDYE3A6NKU9 549 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 PPFIA3O75145 1194 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-209ENST00000422933 FOSP01100 380 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-209ENST00000422933 PTPREP23469 700 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 GJB2P29033 226 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 PORCNQ9H237 461 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 R3HDMLQ9H3Y0 253 aa11.45□□□□□ -0.58
HDLBP-209ENST00000422933 ESYT2A0FGR8 921 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 STXBP3O00186 592 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 JAK2O60674 1132 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 CTDNEP1O95476 244 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 ADORA2AP29274 412 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 MAP2K5Q13163 448 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 LARP1BQ659C4 914 aaKnown RBP11.44□□□□□ -0.58
HDLBP-209ENST00000422933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDLBP-209ENST00000422933 RAET1EQ8TD07 263 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 RIC8AQ9NPQ8 531 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 RIPK3Q9Y572 518 aa11.44□□□□□ -0.58
HDLBP-209ENST00000422933 RBBP6Q7Z6E9 1792 aaKnown RBP11.44□□□□□ -0.58
HDLBP-209ENST00000422933 LOC102724159A0A0B4J2E5 919 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 ASB14A6NK59 587 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 NFIBO00712 420 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PEX10O60683 326 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PPP1R11O60927 126 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 RPS6P62753 249 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 AP3B2Q13367 1082 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 BAATQ14032 418 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 GRB14Q14449 540 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PWP2Q15269 919 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PKN1Q16512 942 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 ARHGEF16Q5VV41 709 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 REXO1Q8N1G1 1221 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 DNERQ8NFT8 737 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 TRIM47Q96LD4 638 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 ZMYND12Q9H0C1 365 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 CYP39A1Q9NYL5 469 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 PCDHA4Q9UN74 947 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 DIS3Q9Y2L1 958 aaKnown RBP11.43□□□□□ -0.58
HDLBP-209ENST00000422933 TRIM17Q9Y577 477 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
HDLBP-209ENST00000422933 DOCK3Q8IZD9 2030 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 CCDC194A0A1B0GVG4 234 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 PIK3CDO00329 1044 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 KRT2P35908 639 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 MFSD14CQ5VZR4 134 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 FCHSD1Q86WN1 690 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 BLIDQ8IZY5 108 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
HDLBP-209ENST00000422933 NSUN6Q8TEA1 469 aaKnown RBP11.42□□□□□ -0.58
HDLBP-209ENST00000422933 CLEC4DQ8WXI8 215 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 APBA2Q99767 749 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 BIN2Q9UBW5 565 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-209ENST00000422933 PLXNA1Q9UIW2 1896 aa11.42□□□□□ -0.58
HDLBP-209ENST00000422933 HTTP42858 3142 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 XRCC5P13010 732 aaKnown RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 FDPSP14324 419 aaKnown RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 CYP2B6P20813 491 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 HOXA13P31271 388 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 ZNF76P36508 570 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 FLT3LGP49771 235 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 HSD17B4P51659 736 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 FOSBP53539 338 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 PDE4DQ08499 809 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 IRF5Q13568 498 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 MORN1Q5T089 497 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 KRT40Q6A162 431 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 MCTP1Q6DN14 999 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 FBXO18Q8NFZ0 1043 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 RMDN3Q96TC7 470 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 PHF20Q9BVI0 1012 aa11.41□□□□□ -0.58
HDLBP-209ENST00000422933 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
HDLBP-209ENST00000422933 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-209ENST00000422933 MMP1P03956 469 aa11.4□□□□□ -0.58
HDLBP-209ENST00000422933 PGK2P07205 417 aa11.4□□□□□ -0.58
HDLBP-209ENST00000422933 HOXC6P09630 235 aa11.4□□□□□ -0.58
HDLBP-209ENST00000422933 CCND2P30279 289 aa11.4□□□□□ -0.58
HDLBP-209ENST00000422933 GHRHRQ02643 423 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms