RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 GSG1L2A8MUP6 293 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 PDE8AO60658 829 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 COBLO75128 1261 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 PRNPP04156 253 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 LCP1P13796 627 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 ITGB7P26010 798 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 RPL10P27635 214 aaKnown RBP4.45□□□□□ -1.7
PTPRC-205ENST00000391970 STAT3P40763 770 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-205ENST00000391970 GPR85P60893 370 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 BNIP3Q12983 259 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 MBLAC2Q68D91 279 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 LRRTM3Q86VH5 581 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 TMEM52Q8NDY8 209 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTPRC-205ENST00000391970 G6PC3Q9BUM1 346 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 TARS2Q9BW92 718 aaKnown RBP4.45□□□□□ -1.7
PTPRC-205ENST00000391970 CARS2Q9HA77 564 aaKnown RBP4.45□□□□□ -1.7
PTPRC-205ENST00000391970 LMCD1Q9NZU5 365 aa4.45□□□□□ -1.7
PTPRC-205ENST00000391970 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 TCRBV16S1A1N1A0A5B0 115 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 PPM1GO15355 546 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 OPA1O60313 960 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 MSCO60682 206 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 RASGRP1O95267 797 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 CRTAMO95727 393 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 TBC1D8O95759 1140 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 ASLP04424 464 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 HMGB1P09429 215 aaKnown RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 CD8BP10966 210 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 NAT1P18440 290 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 IBSPP21815 317 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 IGFALSP35858 605 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 AMPD3Q01432 767 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 LAPTM5Q13571 262 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 ZNF460Q14592 562 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 INF2Q27J81 1249 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 ANGEL2Q5VTE6 544 aaKnown RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 LBX2Q6XYB7 198 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 RNF180Q86T96 592 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 CPNE8Q86YQ8 564 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 IFNL3Q8IZI9 196 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 RCBTB1Q8NDN9 531 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 CHAC2Q8WUX2 184 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 DDX1Q92499 740 aaKnown RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 MAP6Q96JE9 813 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 MAGEB10Q96LZ2 347 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 CAAP1Q9H8G2 361 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 MAPRE3Q9UPY8 281 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 SLC5A6Q9Y289 635 aa4.44□□□□□ -1.7
PTPRC-205ENST00000391970 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 TNPO3Q9Y5L0 923 aaKnown RBP4.44□□□□□ -1.7
PTPRC-205ENST00000391970 C7orf72A4D263 438 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 KIAA1324LA8MWY0 1029 aaPredicted RBP4.43□□□□□ -1.7
PTPRC-205ENST00000391970 ARVCFO00192 962 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 MED26O95402 600 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 SPINK2P20155 84 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 POU3F2P20265 443 aaPredicted RBP4.43□□□□□ -1.7
PTPRC-205ENST00000391970 SOX5P35711 763 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 CD97P48960 835 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 IGBP1P78318 339 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 GUCY1A3Q02108 690 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 ZP2Q05996 745 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 DUSP4Q13115 394 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 HLA-DQA1Q5Y7H0 255 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 ZNF574Q6ZN55 896 aaPredicted RBP4.43□□□□□ -1.7
PTPRC-205ENST00000391970 NFXL1Q6ZNB6 911 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 SPRED2Q7Z698 418 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 MTDHQ86UE4 582 aaKnown RBP4.43□□□□□ -1.7
PTPRC-205ENST00000391970 VSIG10LQ86VR7 867 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 DTX1Q86Y01 620 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 PPM1KQ8N3J5 372 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 LINC01599Q8WXQ3 324 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 HHIPL1Q96JK4 782 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 TNFRSF10DQ9UBN6 386 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 CCDC39Q9UFE4 941 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 EBF1Q9UH73 591 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 PCDHA9Q9Y5H5 950 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 PCDHA8Q9Y5H6 950 aa4.43□□□□□ -1.7
PTPRC-205ENST00000391970 FADS2P1A8MWK0 482 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 B4E1Z4 1266 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 MYO1BO43795 1136 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 ZGLP1P0C6A0 271 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 POU3F3P20264 500 aaPredicted RBP4.42□□□□□ -1.7
PTPRC-205ENST00000391970 CNGA1P29973 690 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 ANAPC15P60006 121 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 KIZQ2M2Z5 673 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 RALGPS1Q5JS13 557 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 SLCO6A1Q86UG4 719 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 SYTL4Q96C24 671 aaPredicted RBP4.42□□□□□ -1.7
PTPRC-205ENST00000391970 ALPK1Q96QP1 1244 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 ALG1Q9BT22 464 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 ADAMTS10Q9H324 1103 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 SLAMF8Q9P0V8 285 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 FBXL7Q9UJT9 491 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 PCDHA2Q9Y5H9 948 aa4.42□□□□□ -1.7
PTPRC-205ENST00000391970 A0A1W2PQ45 241 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 A0A1W2PQY0 241 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 WNT9AO14904 365 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms