RNA–Protein interactions for RNA: ENSMUST00000047677.8

Ccdc18-201, Transcript of Coiled-coil domain-containing protein 18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc18, Length 5,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc18-201ENSMUST00000047677 Lysmd1Q9D0E3 226 aa3.47□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Nkx1-1G3UXB3 402 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Grm1P97772 1199 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Q3TQI7 289 aaKnown RBP3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Dph1Q5NCQ5 438 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Mtmr10Q7TPM9 771 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Cdk8Q8R3L8 464 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 TxlnbQ8VBT1 685 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Slc12a8Q8VI23 705 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Znf354bQ9QXT9 601 aa3.46□□□□□ -1.85
Ccdc18-201ENSMUST00000047677 Pramef17A2ASJ1 475 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Rsbn1lD3Z0K6 821 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Itgb5O70309 798 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Strn4P58404 760 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Nol4P60954 483 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Gpatch11Q3UFS4 262 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ankfy1Q810B6 1169 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ripk3Q9QZL0 486 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Map1aQ9QYR6 2776 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Anapc15P60007 132 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Emc10Q3TAS6 258 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Igdcc3Q8BQC3 813 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tmem266Q8BZB3 538 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tmem47Q9JJG6 181 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tlr2Q9QUN7 784 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ifi202Q9R002 445 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ulk4Q3V129 1303 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Piezo1E2JF22 2547 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Trim30dE9PWL0 497 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Atp9aO70228 1047 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Psma3O70435 255 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Samsn1P57725 372 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Kif20aP97329 887 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ccdc34Q3UI66 367 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Gpr162Q3UN16 588 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Nab2Q61127 525 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Zrsr2Q62377 462 aaKnown RBP3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Lrfn2Q80TG9 788 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Hook3Q8BUK6 718 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Arhgef19Q8BWA8 802 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Smc2Q8CG48 1191 aaKnown RBP3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Spire2Q8K1S6 718 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Wasf1Q8R5H6 559 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 SetQ9EQU5 289 aaKnown RBP3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 PdcQ9QW08 244 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Spry4Q9WTP2 300 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Suclg2Q9Z2I8 433 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Dnah14A0A140LIJ4 4489 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Dhtkd1A2ATU0 921 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Arid4aF8VPQ2 1261 aaKnown RBP3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Fdx1P46656 188 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Lag3Q61790 521 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Gja3Q64448 417 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Taok2Q6ZQ29 1240 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Dnaaf4Q8R368 420 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Apbb1ipQ8R5A3 670 aa3.46□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Sdk2Q6V4S5 2176 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Vmn2r17E9PYF5 849 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Anp32eP97822 260 aaKnown RBP3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Lrrc55Q3UY51 311 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Mns1Q61884 491 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Fmnl3Q6ZPF4 1028 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ubxn4Q8VCH8 506 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 TraipQ8VIG6 470 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Pcdha2Q91Y17 948 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Q922R1 422 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Kremen1Q99N43 473 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Nphp1Q9QY53 687 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Kank3Q9Z1P7 791 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 IqccA2ADZ8 418 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Zkscan2G3X952 960 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Cyth3O08967 399 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Pde11aP0C1Q2 933 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 MafbP54841 323 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tmprss15P97435 1069 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ttbk2Q3UVR3 1243 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ptpdc1Q6NZK8 747 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Aoc2Q812C9 757 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tsen34Q8BMZ5 316 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Rtp1Q8C8C1 263 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Lrrfip2Q91WK0 415 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Filip1Q9CS72 1211 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tjp3Q9QXY1 905 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 AdnpQ9Z103 1108 aaKnown RBP3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Pkhd1l1Q80ZA4 4249 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Ppfia1B2RXQ2 1266 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Cyp27b1O35084 507 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Becn1O88597 448 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 UgcgO88693 394 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Rasa2P58069 847 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Jdp2P97875 163 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 IntuQ059U7 942 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Cdkl5Q3UTQ8 938 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Smg7Q5RJH6 1138 aaKnown RBP3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Klhl17Q6TDP3 640 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Dusp9Q7TNL7 452 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Dnajc16Q80TN4 772 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Rps6kb1Q8BSK8 525 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Oit3Q8R4V5 546 aa3.45□□□□□ -1.86
Ccdc18-201ENSMUST00000047677 Tmem30aQ8VEK0 364 aa3.45□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms