RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 PDS5Q04264 1277 aa3.17□□□□□ -1.9
snR35snR35 RPC11Q04307 110 aaPredicted RBP3.17□□□□□ -1.9
snR35snR35 PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
snR35snR35 ISA2Q12425 185 aa3.17□□□□□ -1.9
snR35snR35 SMC6Q12749 1114 aa3.17□□□□□ -1.9
snR35snR35 BRR1Q99177 341 aaPredicted RBP3.17□□□□□ -1.9
snR35snR35 TAD3Q9URQ3 322 aa3.17□□□□□ -1.9
snR35snR35 YRF1-4O13559 1382 aa3.16□□□□□ -1.9
snR35snR35 YML133CQ03099 1374 aa3.16□□□□□ -1.9
snR35snR35 YLL067CQ07888 1374 aa3.16□□□□□ -1.9
snR35snR35 YLL066CQ99208 1374 aa3.16□□□□□ -1.9
snR35snR35 HSP82P02829 709 aaKnown RBP3.16□□□□□ -1.9
snR35snR35 PEP4P07267 405 aaKnown RBP3.16□□□□□ -1.9
snR35snR35 RPL31BP0C2H9 113 aaKnown RBP3.16□□□□□ -1.9
snR35snR35 HOM3P10869 527 aa3.16□□□□□ -1.9
snR35snR35 PMS1P14242 873 aa3.16□□□□□ -1.9
snR35snR35 ELO2P25358 347 aa3.16□□□□□ -1.9
snR35snR35 YCR051WP25631 222 aa3.16□□□□□ -1.9
snR35snR35 SNC1P31109 117 aa3.16□□□□□ -1.9
snR35snR35 SHP1P34223 423 aa3.16□□□□□ -1.9
snR35snR35 YIL060WP40519 144 aa3.16□□□□□ -1.9
snR35snR35 HXT9P40885 567 aa3.16□□□□□ -1.9
snR35snR35 YPT11P48559 417 aa3.16□□□□□ -1.9
snR35snR35 RSC1P53236 928 aa3.16□□□□□ -1.9
snR35snR35 SOL4P53315 255 aa3.16□□□□□ -1.9
snR35snR35 YMR160WQ03823 816 aa3.16□□□□□ -1.9
snR35snR35 SXM1Q04175 944 aaKnown RBP3.16□□□□□ -1.9
snR35snR35 COQ9Q05779 260 aa3.16□□□□□ -1.9
snR35snR35 YLR352WQ06479 807 aa3.16□□□□□ -1.9
snR35snR35 ATX2Q12067 313 aa3.16□□□□□ -1.9
snR35snR35 EDE1P34216 1381 aa3.15□□□□□ -1.9
snR35snR35 PEX2P32800 271 aa3.15□□□□□ -1.91
snR35snR35 HCS1P34243 683 aa3.15□□□□□ -1.91
snR35snR35 BLI1P35727 113 aa3.15□□□□□ -1.91
snR35snR35 STB6P36085 766 aa3.15□□□□□ -1.91
snR35snR35 ROT2P38138 954 aa3.15□□□□□ -1.91
snR35snR35 VRG4P40107 337 aa3.15□□□□□ -1.91
snR35snR35 IAH1P41734 238 aa3.15□□□□□ -1.91
snR35snR35 SNG1P46950 547 aa3.15□□□□□ -1.91
snR35snR35 ATG27P46989 271 aa3.15□□□□□ -1.91
snR35snR35 BNA3P47039 444 aaKnown RBP3.15□□□□□ -1.91
snR35snR35 AIM22P47051 409 aa3.15□□□□□ -1.91
snR35snR35 MNP1P53163 194 aaPredicted RBP3.15□□□□□ -1.91
snR35snR35 CAF130P53280 1122 aaPredicted RBP3.15□□□□□ -1.91
snR35snR35 YNL181WP53878 407 aa3.15□□□□□ -1.91
snR35snR35 CIK1Q01649 594 aa3.15□□□□□ -1.91
snR35snR35 YVH1Q02256 364 aaKnown RBP3.15□□□□□ -1.91
snR35snR35 TAP42Q04372 366 aa3.15□□□□□ -1.91
snR35snR35 ERB1Q04660 807 aaKnown RBP3.15□□□□□ -1.91
snR35snR35 THI7Q05998 598 aa3.15□□□□□ -1.91
snR35snR35 YLR345WQ06137 509 aa3.15□□□□□ -1.91
snR35snR35 YDL218WQ07629 317 aa3.15□□□□□ -1.91
snR35snR35 YOR365CQ08844 703 aa3.15□□□□□ -1.91
snR35snR35 RDR1Q08904 546 aa3.15□□□□□ -1.91
snR35snR35 NCE102Q12207 173 aaRIP-Chip data3.15□□□□□ -1.91not detected
snR35snR35 SNU66Q12420 587 aaPredicted RBP3.15□□□□□ -1.91
snR35snR35 SPS4P09937 338 aa3.14□□□□□ -1.91
snR35snR35 YER190C-BP0CX94 160 aa3.14□□□□□ -1.91
snR35snR35 YEL077W-AP0CX95 160 aa3.14□□□□□ -1.91
snR35snR35 YGR296C-BP0CX96 160 aa3.14□□□□□ -1.91
snR35snR35 YPL283W-BP0CX97 160 aa3.14□□□□□ -1.91
snR35snR35 YPR204C-AP0CX98 160 aa3.14□□□□□ -1.91
snR35snR35 PEP5P12868 1029 aa3.14□□□□□ -1.91
snR35snR35 AIM17P23180 465 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 CLB1P24868 471 aa3.14□□□□□ -1.91
snR35snR35 SNT1P25357 1226 aa3.14□□□□□ -1.91
snR35snR35 GID7P25569 745 aa3.14□□□□□ -1.91
snR35snR35 CDC60P26637 1090 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 RAD14P28519 371 aa3.14□□□□□ -1.91
snR35snR35 HXT3P32466 567 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 PIM1P36775 1133 aa3.14□□□□□ -1.91
snR35snR35 YPK3P38070 525 aa3.14□□□□□ -1.91
snR35snR35 LRP1P38801 184 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 YMR124WP39523 943 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 PCL6P40038 420 aa3.14□□□□□ -1.91
snR35snR35 YJR154WP47181 346 aa3.14□□□□□ -1.91
snR35snR35 ALT2P52892 507 aa3.14□□□□□ -1.91
snR35snR35 PKP2P53170 491 aa3.14□□□□□ -1.91
snR35snR35 OGG1P53397 376 aaPredicted RBP3.14□□□□□ -1.91
snR35snR35 SMM1P53720 384 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 DUG3P53871 357 aa3.14□□□□□ -1.91
snR35snR35 HEF3P53978 1044 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 SLG1P54867 378 aa3.14□□□□□ -1.91
snR35snR35 SHR3Q02774 210 aa3.14□□□□□ -1.91
snR35snR35 KAP120Q02932 1032 aa3.14□□□□□ -1.91
snR35snR35 RBS1Q05672 457 aaKnown RBP3.14□□□□□ -1.91
snR35snR35 SSK1Q07084 712 aa3.14□□□□□ -1.91
snR35snR35 THP1Q08231 455 aa3.14□□□□□ -1.91
snR35snR35 RAV1P47104 1357 aa3.13□□□□□ -1.91
snR35snR35 RHO2P06781 192 aa3.13□□□□□ -1.91
snR35snR35 COR1P07256 457 aa3.13□□□□□ -1.91
snR35snR35 RPL3P14126 387 aaKnown RBP3.13□□□□□ -1.91
snR35snR35 IDH2P28241 369 aaKnown RBP3.13□□□□□ -1.91
snR35snR35 URA7P28274 579 aaKnown RBP3.13□□□□□ -1.91
snR35snR35 RML2P32611 393 aa3.13□□□□□ -1.91
snR35snR35 GCS1P35197 352 aa3.13□□□□□ -1.91
snR35snR35 TUL1P36096 758 aa3.13□□□□□ -1.91
snR35snR35 SCO2P38072 301 aa3.13□□□□□ -1.91
snR35snR35 SPC97P38863 823 aa3.13□□□□□ -1.91
snR35snR35 MBB1P39534 108 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms