RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLS1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLS1	YLR408C	AFG3	P39925	761 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	ALG5	P40350	334 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	SMM1	P53720	384 aa	Known RBP	4.65	□□□□□ -1.67
BLS1	YLR408C	RHO4	Q00246	291 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	MFB1	Q04922	465 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	VPS38	Q05919	439 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	YOR365C	Q08844	703 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	AVL9	Q12500	764 aa		4.65	□□□□□ -1.67
BLS1	YLR408C	PEP4	P07267	405 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	MRP7	P12687	371 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	PEP5	P12868	1029 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	SGV1	P23293	657 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	ELO2	P25358	347 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	OCA4	P25366	362 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	YUR1	P26725	428 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	PEP3	P27801	918 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	MCM4	P30665	933 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	RPN12	P32496	274 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	MIC60	P36112	540 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	MUM2	P38236	366 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	YHR210C	P38893	341 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	IRC6	P43615	237 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	RMD8	P43620	662 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	IMD4	P50094	524 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	DRN1	P53255	507 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	YGR126W	P53274	230 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	RBG2	P53295	368 aa	Known RBP	4.64	□□□□□ -1.67
BLS1	YLR408C	IPI3	P53877	555 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	TIM10	P87108	93 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	TDA9	Q04545	1251 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	DIC1	Q06143	298 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	GRS2	Q06817	618 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	THI20	Q08224	551 aa		4.64	□□□□□ -1.67
BLS1	YLR408C	SGS1	P35187	1447 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	PDA1	P16387	420 aa	Known RBP	4.63	□□□□□ -1.67
BLS1	YLR408C	GLN3	P18494	730 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	TYR1	P20049	452 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	MRE11	P32829	692 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	WBP1	P33767	430 aa	Known RBP	4.63	□□□□□ -1.67
BLS1	YLR408C	YKL023W	P36103	277 aa	Known RBP	4.63	□□□□□ -1.67
BLS1	YLR408C	REG2	P38232	338 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	BZZ1	P38822	633 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	YEL057C	P39983	233 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	YTA12	P40341	825 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	SPO22	P40511	975 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	AXL1	P40851	1208 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	ROK1	P45818	564 aa	Predicted RBP	4.63	□□□□□ -1.67
BLS1	YLR408C	SNG1	P46950	547 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	CUL3	P53202	744 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	YPL014W	Q02606	381 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	SHR3	Q02774	210 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	MSS11	Q03825	758 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	RLM1	Q12224	676 aa		4.63	□□□□□ -1.67
BLS1	YLR408C	PDH1	Q12428	516 aa	Known RBP	4.63	□□□□□ -1.67
BLS1	YLR408C	SUI2	P20459	304 aa	Known RBP	4.62	□□□□□ -1.67
BLS1	YLR408C	ACH1	P32316	526 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	ERG1	P32476	496 aa	Known RBP	4.62	□□□□□ -1.67
BLS1	YLR408C	SRO77	P38163	1010 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	AZF1	P41696	914 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	ALT2	P52892	507 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	TDA7	P53882	636 aa	Predicted RBP	4.62	□□□□□ -1.67
BLS1	YLR408C	SAM50	P53969	484 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	COQ9	Q05779	260 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	TSR2	Q06672	205 aa	Known RBP	4.62	□□□□□ -1.67
BLS1	YLR408C	NDD1	Q08887	554 aa		4.62	□□□□□ -1.67
BLS1	YLR408C	GAL80	P04387	435 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	ARG3	P05150	338 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	MSR1	P38714	643 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	RTT107	P38850	1070 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	NDE1	P40215	560 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	MAF1	P41910	395 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	ALK1	P43633	760 aa	Known RBP	4.61	□□□□□ -1.67
BLS1	YLR408C	YJR154W	P47181	346 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	BUD32	P53323	261 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	DUG3	P53871	357 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	TOF2	Q02208	771 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	YEH2	Q07950	538 aa		4.61	□□□□□ -1.67
BLS1	YLR408C	SUC2	P00724	532 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	PRP2	P20095	876 aa	Predicted RBP	4.6	□□□□□ -1.67
BLS1	YLR408C	TRS65	P32893	560 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	SHP1	P34223	423 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	RIM2	P38127	377 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	UTP9	P38882	575 aa	Known RBP	4.6	□□□□□ -1.67
BLS1	YLR408C	ERP2	P39704	215 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	ARF3	P40994	183 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
BLS1	YLR408C	DIM1	P41819	318 aa	Known RBP	4.6	□□□□□ -1.67
BLS1	YLR408C	MEP2	P41948	499 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	SAD1	P43589	448 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	AIM22	P47051	409 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	RPM2	Q02773	1202 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	CSR2	Q12734	1121 aa		4.6	□□□□□ -1.67
BLS1	YLR408C	HSH49	Q99181	213 aa	Predicted RBP	4.6	□□□□□ -1.67
BLS1	YLR408C	FOB1	O13329	566 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	CDC31	P06704	161 aa	Known RBP	4.59	□□□□□ -1.67
BLS1	YLR408C	PPZ1	P26570	692 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	VPS17	P32913	551 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	ECM15	P35195	104 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	CSM2	P40465	213 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	MET18	P40469	1032 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	PET130	P47065	347 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms