RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W RRP7P25368 297 aaPredicted RBP3.33□□□□□ -1.88
YLR400WYLR400W HXT3P32466 567 aaKnown RBP3.33□□□□□ -1.88
YLR400WYLR400W ANP1P32629 500 aa3.33□□□□□ -1.88
YLR400WYLR400W TSC10P38342 320 aa3.33□□□□□ -1.88
YLR400WYLR400W GND1P38720 489 aaKnown RBP3.33□□□□□ -1.88
YLR400WYLR400W ALG5P40350 334 aa3.33□□□□□ -1.88
YLR400WYLR400W SSU1P41930 458 aa3.33□□□□□ -1.88
YLR400WYLR400W HXT14P42833 540 aa3.33□□□□□ -1.88
YLR400WYLR400W ZIM17P42844 174 aa3.33□□□□□ -1.88
YLR400WYLR400W FAR3P46671 204 aa3.33□□□□□ -1.88
YLR400WYLR400W DLD2P46681 530 aaKnown RBP3.33□□□□□ -1.88
YLR400WYLR400W MDV1P47025 714 aa3.33□□□□□ -1.88
YLR400WYLR400W OAZ1Q02803 292 aa3.33□□□□□ -1.88
YLR400WYLR400W DPB4Q04603 196 aaKnown RBP3.33□□□□□ -1.88
YLR400WYLR400W YDR286CQ05530 114 aa3.33□□□□□ -1.88
YLR400WYLR400W FMP45Q07651 309 aa3.33□□□□□ -1.88
YLR400WYLR400W RPS10AQ08745 105 aaPredicted RBP3.33□□□□□ -1.88
YLR400WYLR400W LEU9Q12166 604 aaKnown RBP3.33□□□□□ -1.88
YLR400WYLR400W MDH1P17505 334 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
YLR400WYLR400W MNE1P24720 663 aa3.32□□□□□ -1.88
YLR400WYLR400W IMG1P25626 169 aa3.32□□□□□ -1.88
YLR400WYLR400W PUP2P32379 260 aa3.32□□□□□ -1.88
YLR400WYLR400W RPS0AP32905 252 aaKnown RBP3.32□□□□□ -1.88
YLR400WYLR400W MDL1P33310 695 aa3.32□□□□□ -1.88
YLR400WYLR400W YBL055CP34220 418 aaPredicted RBP3.32□□□□□ -1.88
YLR400WYLR400W THI2P38141 450 aa3.32□□□□□ -1.88
YLR400WYLR400W OTU2P38747 307 aaKnown RBP3.32□□□□□ -1.88
YLR400WYLR400W LCB2P40970 561 aa3.32□□□□□ -1.88
YLR400WYLR400W YJL107CP42947 387 aa3.32□□□□□ -1.88
YLR400WYLR400W BUD27P43573 796 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
YLR400WYLR400W SMC3P47037 1230 aa3.32□□□□□ -1.88
YLR400WYLR400W ART5P53244 586 aaKnown RBP3.32□□□□□ -1.88
YLR400WYLR400W IPI3P53877 555 aa3.32□□□□□ -1.88
YLR400WYLR400W YLR455WQ06188 304 aa3.32□□□□□ -1.88
YLR400WYLR400W THI3Q07471 609 aa3.32□□□□□ -1.88
YLR400WYLR400W ETT1Q08421 412 aaKnown RBP3.32□□□□□ -1.88
YLR400WYLR400W PGC1Q08959 321 aa3.32□□□□□ -1.88
YLR400WYLR400W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
YLR400WYLR400W UBX3Q12229 455 aa3.32□□□□□ -1.88
YLR400WYLR400W YDL007C-AQ2V2Q0 85 aa3.32□□□□□ -1.88
YLR400WYLR400W AFI1Q99222 893 aa3.32□□□□□ -1.88
YLR400WYLR400W KRR1P25586 316 aaPredicted RBP3.31□□□□□ -1.88
YLR400WYLR400W IDH2P28241 369 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W PAP1P29468 568 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W RML2P32611 393 aa3.31□□□□□ -1.88
YLR400WYLR400W AFG3P39925 761 aa3.31□□□□□ -1.88
YLR400WYLR400W YAT2P40017 923 aa3.31□□□□□ -1.88
YLR400WYLR400W SEC28P40509 296 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W YIR016WP40572 265 aa3.31□□□□□ -1.88
YLR400WYLR400W RPS10BP46784 105 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W EAF7P53911 425 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W MEH1Q02205 184 aa3.31□□□□□ -1.88
YLR400WYLR400W YMR178WQ03219 274 aaKnown RBP3.31□□□□□ -1.88
YLR400WYLR400W COQ9Q05779 260 aa3.31□□□□□ -1.88
YLR400WYLR400W VTA1Q06263 330 aa3.31□□□□□ -1.88
YLR400WYLR400W YOR389WQ08912 624 aa3.31□□□□□ -1.88
YLR400WYLR400W YER145C-AA0A023PYF4 145 aa3.3□□□□□ -1.88
YLR400WYLR400W GPA1P08539 472 aa3.3□□□□□ -1.88
YLR400WYLR400W MRP2P10663 115 aaPredicted RBP3.3□□□□□ -1.88
YLR400WYLR400W CLC1P17891 233 aa3.3□□□□□ -1.88
YLR400WYLR400W TKL1P23254 680 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W CLB2P24869 491 aa3.3□□□□□ -1.88
YLR400WYLR400W BUD5P25300 642 aaPredicted RBP3.3□□□□□ -1.88
YLR400WYLR400W BOS1P25385 244 aa3.3□□□□□ -1.88
YLR400WYLR400W MTR2P34232 184 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W APE3P37302 537 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W MSR1P38714 643 aa3.3□□□□□ -1.88
YLR400WYLR400W TOM71P38825 639 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W GDI1P39958 451 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W YIL152WP40455 235 aa3.3□□□□□ -1.88
YLR400WYLR400W CAK1P43568 368 aaPredicted RBP3.3□□□□□ -1.88
YLR400WYLR400W AIM22P47051 409 aa3.3□□□□□ -1.88
YLR400WYLR400W ERG26P53199 349 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W YGR127WP53275 312 aa3.3□□□□□ -1.88
YLR400WYLR400W YTP1P53584 459 aa3.3□□□□□ -1.88
YLR400WYLR400W GIS2P53849 153 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
YLR400WYLR400W YNL144CP53907 740 aa3.3□□□□□ -1.88
YLR400WYLR400W AAT1Q01802 451 aa3.3□□□□□ -1.88
YLR400WYLR400W KAP120Q02932 1032 aa3.3□□□□□ -1.88
YLR400WYLR400W PEX25Q02969 394 aa3.3□□□□□ -1.88
YLR400WYLR400W YMR160WQ03823 816 aa3.3□□□□□ -1.88
YLR400WYLR400W ADE13Q05911 482 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W TEN1Q07921 160 aa3.3□□□□□ -1.88
YLR400WYLR400W SPE3Q12074 293 aaKnown RBP3.3□□□□□ -1.88
YLR400WYLR400W NCE102Q12207 173 aaRIP-Chip data3.3□□□□□ -1.88not detected
YLR400WYLR400W GPM3Q12326 303 aa3.3□□□□□ -1.88
YLR400WYLR400W SKS1Q12505 502 aa3.3□□□□□ -1.88
YLR400WYLR400W SPT7P35177 1332 aa3.29□□□□□ -1.88
YLR400WYLR400W RPL3P14126 387 aaKnown RBP3.29□□□□□ -1.88
YLR400WYLR400W REC107P21651 314 aa3.29□□□□□ -1.88
YLR400WYLR400W YCR043CP25361 127 aa3.29□□□□□ -1.88
YLR400WYLR400W SAC1P32368 623 aaKnown RBP3.29□□□□□ -1.88
YLR400WYLR400W YME2P32843 850 aa3.29□□□□□ -1.88
YLR400WYLR400W YKL100CP34248 587 aa3.29□□□□□ -1.88
YLR400WYLR400W HEL1P36113 551 aa3.29□□□□□ -1.88
YLR400WYLR400W PIM1P36775 1133 aa3.29□□□□□ -1.88
YLR400WYLR400W RRT2P38332 387 aa3.29□□□□□ -1.88
YLR400WYLR400W RFC1P38630 861 aaKnown RBP3.29□□□□□ -1.88
YLR400WYLR400W EFM4P40516 257 aa3.29□□□□□ -1.88
YLR400WYLR400W OGG1P53397 376 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms