RNA–Protein interactions for RNA: YLR265C

NEJ1, Transcript of Protein involved in regulation of nonhomologous end joining, yeast

Gene NEJ1, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEJ1	YLR265C	MRPL4	P36517	319 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	CSM2	P40465	213 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	IDP2	P41939	412 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	RAD30	Q04049	632 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	DPB4	Q04603	196 aa	Known RBP	4.16	□□□□□ -1.74
NEJ1	YLR265C	GLO2	Q05584	274 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	SSP2	Q08646	371 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	TCO89	Q08921	799 aa		4.16	□□□□□ -1.74
NEJ1	YLR265C	BUD5	P25300	642 aa	Predicted RBP	4.15	□□□□□ -1.75
NEJ1	YLR265C	LDB16	P25587	256 aa		4.15	□□□□□ -1.75
NEJ1	YLR265C	YCR022C	P25620	114 aa		4.15	□□□□□ -1.75
NEJ1	YLR265C	DPH1	P40487	425 aa	Known RBP	4.15	□□□□□ -1.75
NEJ1	YLR265C	EFM6	P53970	246 aa		4.15	□□□□□ -1.75
NEJ1	YLR265C	RLI1	Q03195	608 aa	Known RBP	4.15	□□□□□ -1.75
NEJ1	YLR265C	SYO1	Q07395	620 aa		4.15	□□□□□ -1.75
NEJ1	YLR265C	ETT1	Q08421	412 aa	Known RBP	4.15	□□□□□ -1.75
NEJ1	YLR265C	RPL20A	P0CX23	172 aa	Known RBP	4.14	□□□□□ -1.75
NEJ1	YLR265C	RPL20B	P0CX24	172 aa	Predicted RBP	4.14	□□□□□ -1.75
NEJ1	YLR265C	APE1	P14904	514 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	AMD1	P15274	810 aa	Known RBP	4.14	□□□□□ -1.75
NEJ1	YLR265C	KGD1	P20967	1014 aa	Known RBP	4.14	□□□□□ -1.75
NEJ1	YLR265C	YKL100C	P34248	587 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	MAL33	P38157	468 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	OSH3	P38713	996 aa	Known RBP	4.14	□□□□□ -1.75
NEJ1	YLR265C	BSC5	P53755	489 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	YSA1	Q01976	231 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	YPL272C	Q08984	517 aa		4.14	□□□□□ -1.75
NEJ1	YLR265C	CDC24	P11433	854 aa	Predicted RBP	4.13	□□□□□ -1.75
NEJ1	YLR265C	PUP3	P25451	205 aa	Known RBP	4.13	□□□□□ -1.75
NEJ1	YLR265C	SAC6	P32599	642 aa	Known RBP	4.13	□□□□□ -1.75
NEJ1	YLR265C	NUP133	P36161	1157 aa		4.13	□□□□□ -1.75
NEJ1	YLR265C	YBP1	P38315	674 aa		4.13	□□□□□ -1.75
NEJ1	YLR265C	YGL242C	P53066	181 aa		4.13	□□□□□ -1.75
NEJ1	YLR265C	MSC1	Q03104	513 aa		4.13	□□□□□ -1.75
NEJ1	YLR265C	SKM1	Q12469	655 aa		4.13	□□□□□ -1.75
NEJ1	YLR265C	RER1	P25560	188 aa		4.12	□□□□□ -1.75
NEJ1	YLR265C	YBL055C	P34220	418 aa	Predicted RBP	4.12	□□□□□ -1.75
NEJ1	YLR265C	FAA2	P39518	744 aa		4.12	□□□□□ -1.75
NEJ1	YLR265C	NPR2	P39923	615 aa		4.12	□□□□□ -1.75
NEJ1	YLR265C	PTR3	P43606	678 aa		4.12	□□□□□ -1.75
NEJ1	YLR265C	DUG3	P53871	357 aa		4.12	□□□□□ -1.75
NEJ1	YLR265C	ARD1	P07347	238 aa	Predicted RBP	4.11	□□□□□ -1.75
NEJ1	YLR265C	RPL19A	P0CX82	189 aa	Known RBP	4.11	□□□□□ -1.75
NEJ1	YLR265C	RPL19B	P0CX83	189 aa	Predicted RBP	4.11	□□□□□ -1.75
NEJ1	YLR265C	PEP5	P12868	1029 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	PMR1	P13586	950 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	PRE8	P23639	250 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	BOS1	P25385	244 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	PMU1	P36069	295 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	AUR1	P36107	401 aa	Predicted RBP	4.11	□□□□□ -1.75
NEJ1	YLR265C	FAR3	P46671	204 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	APT1	P49435	187 aa	Known RBP	4.11	□□□□□ -1.75
NEJ1	YLR265C	YGR127W	P53275	312 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	RTS3	P53289	263 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	BUD32	P53323	261 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	BNA5	Q05979	453 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	SDH5	Q08230	162 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
NEJ1	YLR265C	KAR3	P17119	729 aa		4.1	□□□□□ -1.75
NEJ1	YLR265C	TRX2	P22803	104 aa	Known RBP	4.1	□□□□□ -1.75
NEJ1	YLR265C	IMG1	P25626	169 aa		4.1	□□□□□ -1.75
NEJ1	YLR265C	SNG1	P46950	547 aa		4.1	□□□□□ -1.75
NEJ1	YLR265C	NCE102	Q12207	173 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
NEJ1	YLR265C	YDL009C	Q12210	107 aa		4.1	□□□□□ -1.75
NEJ1	YLR265C	SPE4	Q12455	300 aa		4.1	□□□□□ -1.75
NEJ1	YLR265C	MF(ALPHA)1	P01149	165 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	ATR1	P13090	542 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	TUL1	P36096	758 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	RPL32	P38061	130 aa	Known RBP	4.09	□□□□□ -1.75
NEJ1	YLR265C	ICS2	P38284	255 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	RBG2	P53295	368 aa	Known RBP	4.09	□□□□□ -1.75
NEJ1	YLR265C	WSC2	P53832	503 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	SHR3	Q02774	210 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	HNT3	Q08702	217 aa		4.09	□□□□□ -1.75
NEJ1	YLR265C	CAR1	P00812	333 aa	Known RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	SGF29	P25554	259 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	SSE2	P32590	693 aa	Known RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	YKL023W	P36103	277 aa	Known RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	SHO1	P40073	367 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
NEJ1	YLR265C	ALT2	P52892	507 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	DSD1	P53095	428 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	DRN1	P53255	507 aa	Known RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	MEP3	P53390	489 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	YML037C	Q03703	340 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	BUD22	Q04347	519 aa	Known RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	YKU80	Q04437	629 aa		4.08	□□□□□ -1.76
NEJ1	YLR265C	LUC7	Q07508	261 aa	Predicted RBP	4.08	□□□□□ -1.76
NEJ1	YLR265C	YCK1	P23291	538 aa		4.07	□□□□□ -1.76
NEJ1	YLR265C	YIH1	P25637	258 aa		4.07	□□□□□ -1.76
NEJ1	YLR265C	YBR144C	P34215	104 aa		4.07	□□□□□ -1.76
NEJ1	YLR265C	YER078W-A	Q3E7A2	54 aa		4.07	□□□□□ -1.76
NEJ1	YLR265C	POL4	P25615	582 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	CHS3	P29465	1165 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	FRE1	P32791	686 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	LYS14	P40971	790 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	LCL3	P53153	274 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	YGR126W	P53274	230 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	MSO1	P53604	210 aa	Known RBP	4.06	□□□□□ -1.76
NEJ1	YLR265C	SLD5	Q03406	294 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms