RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C GCN5Q03330 439 aa4.39□□□□□ -1.71
CDC42YLR229C SKY1Q03656 742 aa4.39□□□□□ -1.71
CDC42YLR229C SND1Q04007 877 aa4.39□□□□□ -1.71
CDC42YLR229C LRS4Q04087 347 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C MGR3Q04472 501 aa4.39□□□□□ -1.71
CDC42YLR229C SPC2Q04969 178 aa4.39□□□□□ -1.71
CDC42YLR229C ENT2Q05785 613 aa4.39□□□□□ -1.71
CDC42YLR229C YDL073WQ07454 984 aa4.39□□□□□ -1.71
CDC42YLR229C NOP12Q08208 459 aaKnown RBP4.39□□□□□ -1.71
CDC42YLR229C RKM1Q08961 583 aaPredicted RBP4.39□□□□□ -1.71
CDC42YLR229C LAA1P39526 2014 aa4.38□□□□□ -1.71
CDC42YLR229C SEM1O94742 89 aa4.38□□□□□ -1.71
CDC42YLR229C GAL80P04387 435 aa4.38□□□□□ -1.71
CDC42YLR229C RPL6BP05739 176 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C HIS5P07172 385 aa4.38□□□□□ -1.71
CDC42YLR229C YCL002CP25565 263 aa4.38□□□□□ -1.71
CDC42YLR229C FUB1P25659 250 aa4.38□□□□□ -1.71
CDC42YLR229C CDC20P26309 610 aa4.38□□□□□ -1.71
CDC42YLR229C RAD14P28519 371 aa4.38□□□□□ -1.71
CDC42YLR229C HXT3P32466 567 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C CSE2P33308 149 aa4.38□□□□□ -1.71
CDC42YLR229C TPO5P36029 618 aa4.38□□□□□ -1.71
CDC42YLR229C ETR1P38071 380 aa4.38□□□□□ -1.71
CDC42YLR229C SLM4P38247 162 aa4.38□□□□□ -1.71
CDC42YLR229C AIM18P38884 321 aa4.38□□□□□ -1.71
CDC42YLR229C TVP23P38962 199 aa4.38□□□□□ -1.71
CDC42YLR229C OAF1P39720 1047 aaPredicted RBP4.38□□□□□ -1.71
CDC42YLR229C PZF1P39933 429 aa4.38□□□□□ -1.71
CDC42YLR229C PFK26P40433 827 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C FMP32P43557 207 aa4.38□□□□□ -1.71
CDC42YLR229C RRT5P43607 289 aa4.38□□□□□ -1.71
CDC42YLR229C IRC5P43610 853 aa4.38□□□□□ -1.71
CDC42YLR229C YJL055WP47044 245 aa4.38□□□□□ -1.71
CDC42YLR229C NCS6P53088 359 aa4.38□□□□□ -1.71
CDC42YLR229C COG2P53271 262 aa4.38□□□□□ -1.71
CDC42YLR229C YPR003CP53394 754 aa4.38□□□□□ -1.71
CDC42YLR229C DCP2P53550 970 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C BIO4P53630 237 aa4.38□□□□□ -1.71
CDC42YLR229C DUS1P53759 423 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C RCR2Q03446 210 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C YDR239CQ03780 787 aa4.38□□□□□ -1.71
CDC42YLR229C YDR179W-AQ03983 463 aa4.38□□□□□ -1.71
CDC42YLR229C RAD30Q04049 632 aa4.38□□□□□ -1.71
CDC42YLR229C URC2Q04411 772 aa4.38□□□□□ -1.71
CDC42YLR229C SSL1Q04673 461 aaPredicted RBP4.38□□□□□ -1.71
CDC42YLR229C FMP42Q04991 504 aa4.38□□□□□ -1.71
CDC42YLR229C SSQ1Q05931 657 aaPredicted RBP4.38□□□□□ -1.71
CDC42YLR229C YET3Q07451 203 aa4.38□□□□□ -1.71
CDC42YLR229C YDL114WQ07530 308 aa4.38□□□□□ -1.71
CDC42YLR229C THI73Q07904 523 aa4.38□□□□□ -1.71
CDC42YLR229C ESC8Q08119 714 aa4.38□□□□□ -1.71
CDC42YLR229C CUE5Q08412 411 aaKnown RBP4.38□□□□□ -1.71
CDC42YLR229C DIA2Q08496 732 aaPredicted RBP4.38□□□□□ -1.71
CDC42YLR229C MCH5Q08777 521 aa4.38□□□□□ -1.71
CDC42YLR229C GUP2Q08929 609 aa4.38□□□□□ -1.71
CDC42YLR229C YPR202WQ08993 238 aa4.38□□□□□ -1.71
CDC42YLR229C HAL9Q12180 1030 aa4.38□□□□□ -1.71
CDC42YLR229C AI5_ALPHAQ9ZZX1 630 aa4.38□□□□□ -1.71
CDC42YLR229C TEF1P02994 458 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C HAP2P06774 265 aa4.37□□□□□ -1.71
CDC42YLR229C FBA1P14540 359 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C EMC1P25574 760 aa4.37□□□□□ -1.71
CDC42YLR229C ITR2P30606 609 aa4.37□□□□□ -1.71
CDC42YLR229C TKL2P33315 681 aa4.37□□□□□ -1.71
CDC42YLR229C YBR053CP38235 358 aa4.37□□□□□ -1.71
CDC42YLR229C BIT2P38346 545 aa4.37□□□□□ -1.71
CDC42YLR229C GOS1P38736 223 aa4.37□□□□□ -1.71
CDC42YLR229C YHR078WP38799 552 aa4.37□□□□□ -1.71
CDC42YLR229C BZZ1P38822 633 aa4.37□□□□□ -1.71
CDC42YLR229C STN1P38960 494 aa4.37□□□□□ -1.71
CDC42YLR229C FAA2P39518 744 aa4.37□□□□□ -1.71
CDC42YLR229C YJL206CP39529 758 aa4.37□□□□□ -1.71
CDC42YLR229C UBP7P40453 1071 aa4.37□□□□□ -1.71
CDC42YLR229C ESL1P40456 1118 aa4.37□□□□□ -1.71
CDC42YLR229C MNN11P46985 422 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C IML2P47031 731 aa4.37□□□□□ -1.71
CDC42YLR229C BFA1P47113 574 aa4.37□□□□□ -1.71
CDC42YLR229C YGR127WP53275 312 aa4.37□□□□□ -1.71
CDC42YLR229C SPC98P53540 846 aa4.37□□□□□ -1.71
CDC42YLR229C ESF2P53743 316 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C VPS9P54787 451 aa4.37□□□□□ -1.71
CDC42YLR229C INA17Q02888 182 aa4.37□□□□□ -1.71
CDC42YLR229C PLB2Q03674 706 aa4.37□□□□□ -1.71
CDC42YLR229C TVP15Q03860 143 aa4.37□□□□□ -1.71
CDC42YLR229C YAP6Q03935 383 aa4.37□□□□□ -1.71
CDC42YLR229C TAF11Q04226 346 aa4.37□□□□□ -1.71
CDC42YLR229C BUD22Q04347 519 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C ATG26Q06321 1198 aa4.37□□□□□ -1.71
CDC42YLR229C TSR2Q06672 205 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C AAD4Q07747 329 aa4.37□□□□□ -1.71
CDC42YLR229C PSR1Q07800 427 aa4.37□□□□□ -1.71
CDC42YLR229C UIP4Q08926 304 aa4.37□□□□□ -1.71
CDC42YLR229C DDC1Q08949 612 aa4.37□□□□□ -1.71
CDC42YLR229C GPM2Q12008 311 aa4.37□□□□□ -1.71
CDC42YLR229C HER1Q12276 1246 aa4.37□□□□□ -1.71
CDC42YLR229C SWM1Q12379 170 aa4.37□□□□□ -1.71
CDC42YLR229C EFG1Q3E705 233 aaKnown RBP4.37□□□□□ -1.71
CDC42YLR229C YBR182C-AQ8TGU6 64 aa4.37□□□□□ -1.71
CDC42YLR229C SOD2P00447 233 aa4.36□□□□□ -1.71
CDC42YLR229C HEM1P09950 548 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms