RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA2	YKR077W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
MSA2	YKR077W	ALG5	P40350	334 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	MAF1	P41910	395 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	STB2	P46679	850 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	GUF1	P46943	645 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	YGR066C	P53242	292 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	YGR126W	P53274	230 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	IPI3	P53877	555 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	YPL014W	Q02606	381 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	MED1	Q12321	566 aa		5.01	□□□□□ -1.61
MSA2	YKR077W	GLN3	P18494	730 aa		5	□□□□□ -1.61
MSA2	YKR077W	RPS2	P25443	254 aa	Known RBP	5	□□□□□ -1.61
MSA2	YKR077W	PPZ1	P26570	692 aa		5	□□□□□ -1.61
MSA2	YKR077W	YKL023W	P36103	277 aa	Known RBP	5	□□□□□ -1.61
MSA2	YKR077W	YBR225W	P38321	900 aa		5	□□□□□ -1.61
MSA2	YKR077W	YAT2	P40017	923 aa		5	□□□□□ -1.61
MSA2	YKR077W	MEP2	P41948	499 aa		5	□□□□□ -1.61
MSA2	YKR077W	SNG1	P46950	547 aa		5	□□□□□ -1.61
MSA2	YKR077W	IMD4	P50094	524 aa	Known RBP	5	□□□□□ -1.61
MSA2	YKR077W	CUL3	P53202	744 aa		5	□□□□□ -1.61
MSA2	YKR077W	TDA7	P53882	636 aa	Predicted RBP	5	□□□□□ -1.61
MSA2	YKR077W	RHO4	Q00246	291 aa		5	□□□□□ -1.61
MSA2	YKR077W	SHR3	Q02774	210 aa		5	□□□□□ -1.61
MSA2	YKR077W	DIC1	Q06143	298 aa		5	□□□□□ -1.61
MSA2	YKR077W	FMP45	Q07651	309 aa		5	□□□□□ -1.61
MSA2	YKR077W	SDH5	Q08230	162 aa		5	□□□□□ -1.61
MSA2	YKR077W	NRT1	Q08485	598 aa		5	□□□□□ -1.61
MSA2	YKR077W	HSC82	P15108	705 aa	Known RBP	4.99	□□□□□ -1.61
MSA2	YKR077W	ACH1	P32316	526 aa		4.99	□□□□□ -1.61
MSA2	YKR077W	YER130C	P39959	443 aa		4.99	□□□□□ -1.61
MSA2	YKR077W	ARE2	P53629	642 aa	Known RBP	4.99	□□□□□ -1.61
MSA2	YKR077W	NDD1	Q08887	554 aa		4.99	□□□□□ -1.61
MSA2	YKR077W	PEP5	P12868	1029 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	SEC1	P30619	724 aa	Known RBP	4.98	□□□□□ -1.61
MSA2	YKR077W	TCD2	P36101	447 aa	Known RBP	4.98	□□□□□ -1.61
MSA2	YKR077W	RIM2	P38127	377 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	RTT107	P38850	1070 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
MSA2	YKR077W	RMD8	P43620	662 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	YGL082W	P53155	381 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	MFB1	Q04922	465 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	VPS38	Q05919	439 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	YDL057W	Q07379	328 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	RLM1	Q12224	676 aa		4.98	□□□□□ -1.61
MSA2	YKR077W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
MSA2	YKR077W	PDA1	P16387	420 aa	Known RBP	4.97	□□□□□ -1.61
MSA2	YKR077W	OCA4	P25366	362 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	SRO77	P38163	1010 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	NPR2	P39923	615 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	BUD32	P53323	261 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	SAM50	P53969	484 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	TIM10	P87108	93 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	FIN1	Q03898	291 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	YEH2	Q07950	538 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	THI20	Q08224	551 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	NCE102	Q12207	173 aa	RIP-Chip data	4.97	□□□□□ -1.61	not detected
MSA2	YKR077W	PDH1	Q12428	516 aa	Known RBP	4.97	□□□□□ -1.61
MSA2	YKR077W	AVL9	Q12500	764 aa		4.97	□□□□□ -1.61
MSA2	YKR077W	VPS17	P32913	551 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	YHR210C	P38893	341 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	YTA12	P40341	825 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	YJL070C	P40361	888 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	YJL068C	P40363	299 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	DIM1	P41819	318 aa	Known RBP	4.96	□□□□□ -1.62
MSA2	YKR077W	RPT6	Q01939	405 aa	Known RBP	4.96	□□□□□ -1.62
MSA2	YKR077W	RPC11	Q04307	110 aa	Predicted RBP	4.96	□□□□□ -1.62
MSA2	YKR077W	RBA50	Q04418	439 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	GLO2	Q05584	274 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	COQ9	Q05779	260 aa		4.96	□□□□□ -1.62
MSA2	YKR077W	HSH49	Q99181	213 aa	Predicted RBP	4.96	□□□□□ -1.62
MSA2	YKR077W	GAL80	P04387	435 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	MRP7	P12687	371 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	SGV1	P23293	657 aa	Known RBP	4.95	□□□□□ -1.62
MSA2	YKR077W	ECM15	P35195	104 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	YNK1	P36010	153 aa	Known RBP	4.95	□□□□□ -1.62
MSA2	YKR077W	MSR1	P38714	643 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	ALK1	P43633	760 aa	Known RBP	4.95	□□□□□ -1.62
MSA2	YKR077W	YJR154W	P47181	346 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	ALT2	P52892	507 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	RBG2	P53295	368 aa	Known RBP	4.95	□□□□□ -1.62
MSA2	YKR077W	VPS72	Q03388	795 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	YOR365C	Q08844	703 aa		4.95	□□□□□ -1.62
MSA2	YKR077W	PEP4	P07267	405 aa	Known RBP	4.94	□□□□□ -1.62
MSA2	YKR077W	SEC62	P21825	274 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	RPN12	P32496	274 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	WBP1	P33767	430 aa	Known RBP	4.94	□□□□□ -1.62
MSA2	YKR077W	DOT5	P40553	215 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	TOF2	Q02208	771 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	YMR317W	Q04893	1140 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	COG4	Q06096	861 aa		4.94	□□□□□ -1.62
MSA2	YKR077W	FOB1	O13329	566 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	PRD1	P25375	712 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	YME1	P32795	747 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	CSM2	P40465	213 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	SPO22	P40511	975 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	MET28	P40573	187 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	DRN1	P53255	507 aa	Known RBP	4.93	□□□□□ -1.62
MSA2	YKR077W	DAP1	Q12091	152 aa		4.93	□□□□□ -1.62
MSA2	YKR077W	RAD52	P06778	471 aa	Known RBP	4.92	□□□□□ -1.62
MSA2	YKR077W	PMS1	P14242	873 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms