RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W YBL059WP34224 193 aa2.22□□□□□ -2.05
HIT1YJR055W SWD3P38123 315 aa2.22□□□□□ -2.05
HIT1YJR055W ACA1P39970 489 aa2.22□□□□□ -2.05
HIT1YJR055W RPS7BP48164 190 aaKnown RBP2.22□□□□□ -2.05
HIT1YJR055W RRT6P53117 311 aaPredicted RBP2.22□□□□□ -2.05
HIT1YJR055W MUB1Q03162 620 aa2.22□□□□□ -2.05
HIT1YJR055W SDH5Q08230 162 aa2.22□□□□□ -2.05
HIT1YJR055W TMS1Q12116 473 aa2.22□□□□□ -2.05
HIT1YJR055W ERV2Q12284 196 aa2.22□□□□□ -2.05
HIT1YJR055W ATP4P05626 244 aa2.21□□□□□ -2.06
HIT1YJR055W PAD1P33751 242 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
HIT1YJR055W GRX7P38068 203 aa2.21□□□□□ -2.06
HIT1YJR055W YNG2P38806 282 aaKnown RBP2.21□□□□□ -2.06
HIT1YJR055W NDT80P38830 627 aa2.21□□□□□ -2.06
HIT1YJR055W HAT2P39984 401 aa2.21□□□□□ -2.06
HIT1YJR055W FMP10P40098 244 aa2.21□□□□□ -2.06
HIT1YJR055W SCD6P45978 349 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
HIT1YJR055W ALT2P52892 507 aa2.21□□□□□ -2.06
HIT1YJR055W PIL1P53252 339 aaKnown RBP2.21□□□□□ -2.06
HIT1YJR055W MRPL51Q06090 140 aaPredicted RBP2.21□□□□□ -2.06
HIT1YJR055W SKG3Q06315 1026 aa2.21□□□□□ -2.06
HIT1YJR055W TEN1Q07921 160 aa2.21□□□□□ -2.06
HIT1YJR055W LEU9Q12166 604 aaKnown RBP2.21□□□□□ -2.06
HIT1YJR055W HRT3Q12347 344 aa2.21□□□□□ -2.06
HIT1YJR055W TY1B-DR4Q07793 1604 aa2.2□□□□□ -2.06
HIT1YJR055W YLR302CO13544 120 aa2.2□□□□□ -2.06
HIT1YJR055W LPD1P09624 499 aaKnown RBP2.2□□□□□ -2.06
HIT1YJR055W PEP5P12868 1029 aa2.2□□□□□ -2.06
HIT1YJR055W PWP1P21304 576 aaKnown RBP2.2□□□□□ -2.06
HIT1YJR055W PDB1P32473 366 aaKnown RBP2.2□□□□□ -2.06
HIT1YJR055W FRE1P32791 686 aa2.2□□□□□ -2.06
HIT1YJR055W SLZ1P40167 298 aa2.2□□□□□ -2.06
HIT1YJR055W DIA3P52290 468 aa2.2□□□□□ -2.06
HIT1YJR055W BUD32P53323 261 aa2.2□□□□□ -2.06
HIT1YJR055W PAP2P53632 584 aaKnown RBP2.2□□□□□ -2.06
HIT1YJR055W DUG3P53871 357 aa2.2□□□□□ -2.06
HIT1YJR055W SHR3Q02774 210 aa2.2□□□□□ -2.06
HIT1YJR055W ELP3Q02908 557 aaKnown RBP2.2□□□□□ -2.06
HIT1YJR055W RRG7Q08774 242 aaPredicted RBP2.2□□□□□ -2.06
HIT1YJR055W YDL012CQ12489 107 aa2.2□□□□□ -2.06
HIT1YJR055W RPB2P08518 1224 aaKnown RBP2.19□□□□□ -2.06
HIT1YJR055W CLN3P13365 580 aa2.19□□□□□ -2.06
HIT1YJR055W CPR1P14832 162 aaKnown RBP2.19□□□□□ -2.06
HIT1YJR055W APA1P16550 321 aaKnown RBP2.19□□□□□ -2.06
HIT1YJR055W BUD5P25300 642 aaPredicted RBP2.19□□□□□ -2.06
HIT1YJR055W TEF4P36008 412 aaKnown RBP2.19□□□□□ -2.06
HIT1YJR055W RIC1P40395 1056 aa2.19□□□□□ -2.06
HIT1YJR055W SLD5Q03406 294 aa2.19□□□□□ -2.06
HIT1YJR055W PBA1Q05778 276 aa2.19□□□□□ -2.06
HIT1YJR055W BLS1Q06071 122 aa2.19□□□□□ -2.06
HIT1YJR055W ETT1Q08421 412 aaKnown RBP2.19□□□□□ -2.06
HIT1YJR055W SUP35P05453 685 aaKnown RBP2.18□□□□□ -2.06
HIT1YJR055W PFK2P16862 959 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
HIT1YJR055W YCR007CP25354 239 aa2.18□□□□□ -2.06
HIT1YJR055W YKL100CP34248 587 aa2.18□□□□□ -2.06
HIT1YJR055W ALY1P36117 915 aa2.18□□□□□ -2.06
HIT1YJR055W YIL067CP40514 678 aa2.18□□□□□ -2.06
HIT1YJR055W SNG1P46950 547 aa2.18□□□□□ -2.06
HIT1YJR055W RCO1Q04779 684 aa2.18□□□□□ -2.06
HIT1YJR055W VPS74Q06385 345 aa2.18□□□□□ -2.06
HIT1YJR055W PSR1Q07800 427 aa2.18□□□□□ -2.06
HIT1YJR055W HHF1P02309 103 aaKnown RBP2.17□□□□□ -2.06
HIT1YJR055W ADH7P25377 361 aa2.17□□□□□ -2.06
HIT1YJR055W SGF29P25554 259 aa2.17□□□□□ -2.06
HIT1YJR055W SYN8P31377 255 aa2.17□□□□□ -2.06
HIT1YJR055W MRP20P32387 263 aa2.17□□□□□ -2.06
HIT1YJR055W MRP4P32902 394 aa2.17□□□□□ -2.06
HIT1YJR055W ARK1P53974 638 aa2.17□□□□□ -2.06
HIT1YJR055W IRC15Q02733 499 aa2.17□□□□□ -2.06
HIT1YJR055W MSC1Q03104 513 aa2.17□□□□□ -2.06
HIT1YJR055W RRN11Q04712 507 aa2.17□□□□□ -2.06
HIT1YJR055W MRPL35Q06678 367 aa2.17□□□□□ -2.06
HIT1YJR055W NCE102Q12207 173 aaRIP-Chip data2.17□□□□□ -2.06not detected
HIT1YJR055W RBD2Q12270 262 aa2.17□□□□□ -2.06
HIT1YJR055W YEF3P16521 1044 aaKnown RBP2.16□□□□□ -2.06
HIT1YJR055W XRS2P33301 854 aa2.16□□□□□ -2.06
HIT1YJR055W CNS1P33313 385 aa2.16□□□□□ -2.06
HIT1YJR055W TOM20P35180 183 aa2.16□□□□□ -2.06
HIT1YJR055W YKL023WP36103 277 aaKnown RBP2.16□□□□□ -2.06
HIT1YJR055W KTR3P38130 404 aaPredicted RBP2.16□□□□□ -2.06
HIT1YJR055W YJR154WP47181 346 aa2.16□□□□□ -2.06
HIT1YJR055W DRN1P53255 507 aaKnown RBP2.16□□□□□ -2.06
HIT1YJR055W DPB4Q04603 196 aaKnown RBP2.16□□□□□ -2.06
HIT1YJR055W TRM8Q12009 286 aa2.16□□□□□ -2.06
HIT1YJR055W NYV1Q12255 253 aa2.16□□□□□ -2.06
HIT1YJR055W ADH2P00331 348 aaKnown RBP2.15□□□□□ -2.07
HIT1YJR055W HEM15P16622 393 aa2.15□□□□□ -2.07
HIT1YJR055W VMA16P23968 213 aa2.15□□□□□ -2.07
HIT1YJR055W ARO2P28777 376 aaKnown RBP2.15□□□□□ -2.07
HIT1YJR055W NUP133P36161 1157 aa2.15□□□□□ -2.07
HIT1YJR055W UME6P39001 836 aa2.15□□□□□ -2.07
HIT1YJR055W REE1P40893 198 aa2.15□□□□□ -2.07
HIT1YJR055W BNA1P47096 177 aa2.15□□□□□ -2.07
HIT1YJR055W DSD1P53095 428 aa2.15□□□□□ -2.07
HIT1YJR055W IVY1Q04934 453 aa2.15□□□□□ -2.07
HIT1YJR055W LSP1Q12230 341 aaKnown RBP2.15□□□□□ -2.07
HIT1YJR055W HIP1P06775 603 aa2.14□□□□□ -2.07
HIT1YJR055W CHS1P08004 1131 aa2.14□□□□□ -2.07
HIT1YJR055W KGD1P20967 1014 aaKnown RBP2.14□□□□□ -2.07
HIT1YJR055W PUP3P25451 205 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms