RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W ASE1P50275 885 aa3.32□□□□□ -1.88
PRE1YER012W YGR117CP53270 476 aa3.32□□□□□ -1.88
PRE1YER012W TDA7P53882 636 aaPredicted RBP3.32□□□□□ -1.88
PRE1YER012W SMA2Q04658 369 aa3.32□□□□□ -1.88
PRE1YER012W TLG2Q08144 397 aa3.32□□□□□ -1.88
PRE1YER012W PPT2Q12036 173 aa3.32□□□□□ -1.88
PRE1YER012W RRP6Q12149 733 aaKnown RBP3.32□□□□□ -1.88
PRE1YER012W GRX6Q12438 231 aa3.32□□□□□ -1.88
PRE1YER012W SSK22P25390 1331 aaPredicted RBP3.32□□□□□ -1.88
PRE1YER012W LYS2P07702 1392 aa3.32□□□□□ -1.88
PRE1YER012W CYB2P00175 591 aa3.31□□□□□ -1.88
PRE1YER012W AGA1P32323 725 aa3.31□□□□□ -1.88
PRE1YER012W AVT5P38176 459 aa3.31□□□□□ -1.88
PRE1YER012W ARC35P53731 342 aaKnown RBP3.31□□□□□ -1.88
PRE1YER012W YNR061CP53747 219 aa3.31□□□□□ -1.88
PRE1YER012W MDG1P53885 366 aa3.31□□□□□ -1.88
PRE1YER012W IRC4Q03036 179 aa3.31□□□□□ -1.88
PRE1YER012W YMR178WQ03219 274 aaKnown RBP3.31□□□□□ -1.88
PRE1YER012W RBA50Q04418 439 aa3.31□□□□□ -1.88
PRE1YER012W RDR1Q08904 546 aa3.31□□□□□ -1.88
PRE1YER012W YOR019WQ99248 730 aa3.31□□□□□ -1.88
PRE1YER012W MSM1P22438 575 aa3.3□□□□□ -1.88
PRE1YER012W PHD1P36093 366 aa3.3□□□□□ -1.88
PRE1YER012W NUP133P36161 1157 aa3.3□□□□□ -1.88
PRE1YER012W ANS1P38832 159 aa3.3□□□□□ -1.88
PRE1YER012W PHO90P39535 881 aa3.3□□□□□ -1.88
PRE1YER012W TPM2P40414 161 aa3.3□□□□□ -1.88
PRE1YER012W PFK26P40433 827 aaKnown RBP3.3□□□□□ -1.88
PRE1YER012W CTF18P49956 741 aa3.3□□□□□ -1.88
PRE1YER012W REG1Q00816 1014 aa3.3□□□□□ -1.88
PRE1YER012W PSR2Q07949 397 aa3.3□□□□□ -1.88
PRE1YER012W NUC1P08466 329 aa3.29□□□□□ -1.88
PRE1YER012W MRP7P12687 371 aa3.29□□□□□ -1.88
PRE1YER012W REV1P12689 985 aa3.29□□□□□ -1.88
PRE1YER012W SUI2P20459 304 aaKnown RBP3.29□□□□□ -1.88
PRE1YER012W ACH1P32316 526 aa3.29□□□□□ -1.88
PRE1YER012W LOS1P33418 1100 aaPredicted RBP3.29□□□□□ -1.88
PRE1YER012W TFC3P34111 1160 aa3.29□□□□□ -1.88
PRE1YER012W MIC60P36112 540 aa3.29□□□□□ -1.88
PRE1YER012W PSD1P39006 500 aa3.29□□□□□ -1.88
PRE1YER012W RGI2P40188 164 aa3.29□□□□□ -1.88
PRE1YER012W DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
PRE1YER012W SOL4P53315 255 aa3.29□□□□□ -1.88
PRE1YER012W CIA1Q05583 330 aa3.29□□□□□ -1.88
PRE1YER012W ATG26Q06321 1198 aa3.29□□□□□ -1.88
PRE1YER012W DIB1Q06819 143 aaPredicted RBP3.29□□□□□ -1.88
PRE1YER012W YDL144CQ07589 356 aa3.29□□□□□ -1.88
PRE1YER012W ATG9Q12142 997 aa3.29□□□□□ -1.88
PRE1YER012W RRG1Q12167 365 aaPredicted RBP3.29□□□□□ -1.88
PRE1YER012W FLO1P32768 1537 aa3.29□□□□□ -1.88
PRE1YER012W GDH1P07262 454 aaKnown RBP3.28□□□□□ -1.88
PRE1YER012W YCL049CP25577 312 aa3.28□□□□□ -1.88
PRE1YER012W MIA40P36046 403 aa3.28□□□□□ -1.88
PRE1YER012W KEL1P38853 1164 aaKnown RBP3.28□□□□□ -1.88
PRE1YER012W MDM31P38880 579 aa3.28□□□□□ -1.88
PRE1YER012W YJR061WP40355 935 aa3.28□□□□□ -1.88
PRE1YER012W IKS1P47042 667 aa3.28□□□□□ -1.88
PRE1YER012W SNF3P10870 884 aa3.27□□□□□ -1.89
PRE1YER012W ERG8P24521 451 aa3.27□□□□□ -1.89
PRE1YER012W PGS1P25578 521 aa3.27□□□□□ -1.89
PRE1YER012W GAC1P28006 793 aa3.27□□□□□ -1.89
PRE1YER012W SPC34P36131 295 aa3.27□□□□□ -1.89
PRE1YER012W AXL1P40851 1208 aa3.27□□□□□ -1.89
PRE1YER012W STR3P53101 465 aaKnown RBP3.27□□□□□ -1.89
PRE1YER012W MSS11Q03825 758 aa3.27□□□□□ -1.89
PRE1YER012W VCX1Q99385 411 aa3.27□□□□□ -1.89
PRE1YER012W HXK2P04807 486 aaKnown RBP3.26□□□□□ -1.89
PRE1YER012W RPL15AP05748 204 aaKnown RBP3.26□□□□□ -1.89
PRE1YER012W PHO81P17442 1178 aa3.26□□□□□ -1.89
PRE1YER012W MRPL36P36531 177 aa3.26□□□□□ -1.89
PRE1YER012W KTR3P38130 404 aaPredicted RBP3.26□□□□□ -1.89
PRE1YER012W RRT6P53117 311 aaPredicted RBP3.26□□□□□ -1.89
PRE1YER012W PRP42Q03776 544 aaKnown RBP3.26□□□□□ -1.89
PRE1YER012W CSI1Q04368 295 aa3.26□□□□□ -1.89
PRE1YER012W YLL056CQ12177 298 aa3.26□□□□□ -1.89
PRE1YER012W PDH1Q12428 516 aaKnown RBP3.26□□□□□ -1.89
PRE1YER012W ERG27Q12452 347 aaKnown RBP3.26□□□□□ -1.89
PRE1YER012W SAC3P46674 1301 aa3.25□□□□□ -1.89
PRE1YER012W CBS2P14905 389 aa3.25□□□□□ -1.89
PRE1YER012W PFK2P16862 959 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
PRE1YER012W RAD16P31244 790 aa3.25□□□□□ -1.89
PRE1YER012W NPR3P38742 1146 aa3.25□□□□□ -1.89
PRE1YER012W ACA1P39970 489 aa3.25□□□□□ -1.89
PRE1YER012W SEC24P40482 926 aaKnown RBP3.25□□□□□ -1.89
PRE1YER012W IST3P40565 148 aaPredicted RBP3.25□□□□□ -1.89
PRE1YER012W YDL186WP48568 277 aa3.25□□□□□ -1.89
PRE1YER012W BOR1P53838 576 aa3.25□□□□□ -1.89
PRE1YER012W IST1P53843 298 aaPredicted RBP3.25□□□□□ -1.89
PRE1YER012W MRPL13Q02204 264 aa3.25□□□□□ -1.89
PRE1YER012W DIC1Q06143 298 aa3.25□□□□□ -1.89
PRE1YER012W RPS2P25443 254 aaKnown RBP3.24□□□□□ -1.89
PRE1YER012W PCA1P38360 1216 aa3.24□□□□□ -1.89
PRE1YER012W PKP1P40530 394 aa3.24□□□□□ -1.89
PRE1YER012W YJL213WP40896 331 aa3.24□□□□□ -1.89
PRE1YER012W SPG5P42933 373 aa3.24□□□□□ -1.89
PRE1YER012W DPB11P47027 764 aaPredicted RBP3.24□□□□□ -1.89
PRE1YER012W YMR087WQ04299 284 aa3.24□□□□□ -1.89
PRE1YER012W PSK2Q08217 1101 aa3.24□□□□□ -1.89
PRE1YER012W YPR117WQ06116 2489 aa3.24□□□□□ -1.89
PRE1YER012W ATP4P05626 244 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms