RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	YBR144C	P34215	104 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	SAS3	P34218	831 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	SNU114	P36048	1008 aa	Known RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	TCD2	P36101	447 aa	Known RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	OLA1	P38219	394 aa	Known RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	GDT1	P38301	280 aa	Predicted RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	TOM71	P38825	639 aa	Known RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	ALG5	P40350	334 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	SSU1	P41930	458 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	FAR3	P46671	204 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	YPR003C	P53394	754 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	SPO19	Q03029	223 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	ECM22	Q05958	814 aa	Predicted RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	THI3	Q07471	609 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	ATG29	Q12092	213 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	ATG9	Q12142	997 aa		5.97	□□□□□ -1.45
TRP1	YDR007W	LEU9	Q12166	604 aa	Known RBP	5.97	□□□□□ -1.45
TRP1	YDR007W	SUP35	P05453	685 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	MRPL10	P36520	322 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	OTU2	P38747	307 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	LRP1	P38801	184 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	YEL020C	P39994	560 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	HYR1	P40581	163 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	PET130	P47065	347 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	YGR127W	P53275	312 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	IPI3	P53877	555 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	ARP5	P53946	755 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	BOP3	P53958	396 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	EFM6	P53970	246 aa		5.96	□□□□□ -1.46
TRP1	YDR007W	DPB4	Q04603	196 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	MRD1	Q06106	887 aa	Known RBP	5.96	□□□□□ -1.46
TRP1	YDR007W	AQY1	P0CD91	305 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	KGD1	P20967	1014 aa	Known RBP	5.95	□□□□□ -1.46
TRP1	YDR007W	WBP1	P33767	430 aa	Known RBP	5.95	□□□□□ -1.46
TRP1	YDR007W	TIF3	P34167	436 aa	Known RBP	5.95	□□□□□ -1.46
TRP1	YDR007W	CMC1	P36064	111 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	ELO1	P39540	310 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	LTP1	P40347	161 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	AIM20	P40451	204 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	PTR3	P43606	678 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	SAE2	P46946	345 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	IMD4	P50094	524 aa	Known RBP	5.95	□□□□□ -1.46
TRP1	YDR007W	TWF1	P53250	332 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	TLG2	Q08144	397 aa		5.95	□□□□□ -1.46
TRP1	YDR007W	YRF1-1	P0CX20	1796 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	YRF1-5	P0CX21	1796 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	YRF1-8	P0CX22	1796 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	CLN1	P20437	546 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	REC107	P21651	314 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	BRF1	P29056	596 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	SYN8	P31377	255 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	MRE11	P32829	692 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	PMT1	P33775	817 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	MRK1	P50873	501 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	INP2	Q03824	705 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	UBX2	Q04228	584 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	RQC1	Q05468	723 aa	Known RBP	5.94	□□□□□ -1.46
TRP1	YDR007W	YPL225W	Q08971	146 aa	Known RBP	5.94	□□□□□ -1.46
TRP1	YDR007W	APL4	Q12028	832 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	YLR049C	Q12110	428 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	RLM1	Q12224	676 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	HAP1	P0CE41	1502 aa		5.94	□□□□□ -1.46
TRP1	YDR007W	TY1B-A	O13527	1196 aa	Known RBP	5.93	□□□□□ -1.46
TRP1	YDR007W	CDC37	P06101	506 aa	Known RBP	5.93	□□□□□ -1.46
TRP1	YDR007W	MRP13	P12686	339 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	PMS1	P14242	873 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	PUP3	P25451	205 aa	Known RBP	5.93	□□□□□ -1.46
TRP1	YDR007W	IMG1	P25626	169 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	NUF2	P33895	451 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	GCS1	P35197	352 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	STB6	P36085	766 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	ICS2	P38284	255 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	SEC9	P40357	651 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	SGF73	P53165	657 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	SLI1	P53304	468 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	PFA5	Q03289	374 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	FIN1	Q03898	291 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	RPC11	Q04307	110 aa	Predicted RBP	5.93	□□□□□ -1.46
TRP1	YDR007W	YLR345W	Q06137	509 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	TSR1	Q07381	788 aa	Known RBP	5.93	□□□□□ -1.46
TRP1	YDR007W	YOL159C	Q08300	171 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	YKL068W-A	Q3E826	78 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	SPO14	P36126	1683 aa		5.93	□□□□□ -1.46
TRP1	YDR007W	RAP1	P11938	827 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	ART10	P18634	518 aa	Known RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	APN1	P22936	367 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	SPO11	P23179	398 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	YCR051W	P25631	222 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	PAP1	P29468	568 aa	Known RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	MSS51	P32335	436 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	RPC37	P36121	282 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	FTH1	P38310	465 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	YIL166C	P40445	542 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	SHE4	P51534	789 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	ART5	P53244	586 aa	Known RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	OGG1	P53397	376 aa	Predicted RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	APM1	Q00776	475 aa	Predicted RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	CIK1	Q01649	594 aa		5.92	□□□□□ -1.46
TRP1	YDR007W	ERB1	Q04660	807 aa	Known RBP	5.92	□□□□□ -1.46
TRP1	YDR007W	IRC10	Q08118	586 aa		5.92	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms