RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W FUI1P38196 639 aa1.42□□□□□ -2.18
CDC36YDL165W MED8P38304 223 aa1.42□□□□□ -2.18
CDC36YDL165W NDT80P38830 627 aa1.42□□□□□ -2.18
CDC36YDL165W RIO2P40160 425 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W SWP82P43554 623 aa1.42□□□□□ -2.18
CDC36YDL165W BNA1P47096 177 aa1.42□□□□□ -2.18
CDC36YDL165W RSC1P53236 928 aa1.42□□□□□ -2.18
CDC36YDL165W IST1P53843 298 aaPredicted RBP1.42□□□□□ -2.18
CDC36YDL165W YNL050CP53952 270 aa1.42□□□□□ -2.18
CDC36YDL165W GTR1Q00582 310 aa1.42□□□□□ -2.18
CDC36YDL165W RSM28Q03430 361 aa1.42□□□□□ -2.18
CDC36YDL165W NNT1Q05874 261 aa1.42□□□□□ -2.18
CDC36YDL165W MRD1Q06106 887 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W RRP9Q06506 573 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W CSR1Q06705 408 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W VAM6Q07468 1049 aa1.42□□□□□ -2.18
CDC36YDL165W IWR1Q07532 353 aaPredicted RBP1.42□□□□□ -2.18
CDC36YDL165W COX17Q12287 69 aa1.42□□□□□ -2.18
CDC36YDL165W APC2Q12440 853 aa1.42□□□□□ -2.18
CDC36YDL165W SEC39Q12745 709 aa1.42□□□□□ -2.18
CDC36YDL165W STH1P32597 1359 aa1.42□□□□□ -2.18
CDC36YDL165W BIK1P11709 440 aa1.41□□□□□ -2.18
CDC36YDL165W ATR1P13090 542 aa1.41□□□□□ -2.18
CDC36YDL165W SEN2P16658 377 aa1.41□□□□□ -2.18
CDC36YDL165W RPB4P20433 221 aaPredicted RBP1.41□□□□□ -2.18
CDC36YDL165W FAR1P21268 830 aa1.41□□□□□ -2.18
CDC36YDL165W PHO84P25297 587 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W DPB3P27344 201 aa1.41□□□□□ -2.18
CDC36YDL165W YME2P32843 850 aa1.41□□□□□ -2.18
CDC36YDL165W NUF2P33895 451 aa1.41□□□□□ -2.18
CDC36YDL165W YBL059WP34224 193 aa1.41□□□□□ -2.18
CDC36YDL165W COY1P34237 679 aa1.41□□□□□ -2.18
CDC36YDL165W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
CDC36YDL165W MPE1P35728 441 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W KDX1P36005 433 aa1.41□□□□□ -2.18
CDC36YDL165W VPS24P36095 224 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W BFR1P38934 470 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
CDC36YDL165W PSD1P39006 500 aa1.41□□□□□ -2.18
CDC36YDL165W CIN4P39110 191 aa1.41□□□□□ -2.18
CDC36YDL165W NPR2P39923 615 aa1.41□□□□□ -2.18
CDC36YDL165W ACA1P39970 489 aa1.41□□□□□ -2.18
CDC36YDL165W PSF2P40359 213 aa1.41□□□□□ -2.18
CDC36YDL165W UTP18P40362 594 aaPredicted RBP1.41□□□□□ -2.18
CDC36YDL165W MET18P40469 1032 aa1.41□□□□□ -2.18
CDC36YDL165W GPI8P49018 411 aa1.41□□□□□ -2.18
CDC36YDL165W COG1P53079 417 aa1.41□□□□□ -2.18
CDC36YDL165W UBX4P54730 416 aa1.41□□□□□ -2.18
CDC36YDL165W CWC21Q03375 135 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W YMR111CQ04461 462 aaPredicted RBP1.41□□□□□ -2.18
CDC36YDL165W DIC1Q06143 298 aa1.41□□□□□ -2.18
CDC36YDL165W TSR1Q07381 788 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W YDL121CQ07541 149 aa1.41□□□□□ -2.18
CDC36YDL165W RIX7Q07844 837 aaKnown RBP1.41□□□□□ -2.18
CDC36YDL165W NKP1Q12493 238 aa1.41□□□□□ -2.18
CDC36YDL165W RTP1Q12751 981 aa1.41□□□□□ -2.18
CDC36YDL165W RAD50P12753 1312 aa1.4□□□□□ -2.18
CDC36YDL165W SSK22P25390 1331 aaPredicted RBP1.4□□□□□ -2.18
CDC36YDL165W TCB3Q03640 1545 aaKnown RBP1.4□□□□□ -2.18
CDC36YDL165W ATP4P05626 244 aa1.4□□□□□ -2.19
CDC36YDL165W PET494P07390 489 aaPredicted RBP1.4□□□□□ -2.19
CDC36YDL165W NUC1P08466 329 aa1.4□□□□□ -2.19
CDC36YDL165W PHO81P17442 1178 aa1.4□□□□□ -2.19
CDC36YDL165W YCR022CP25620 114 aa1.4□□□□□ -2.19
CDC36YDL165W CMK1P27466 446 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W NFU1P32860 256 aa1.4□□□□□ -2.19
CDC36YDL165W TFC3P34111 1160 aa1.4□□□□□ -2.19
CDC36YDL165W RRP1P35178 278 aaPredicted RBP1.4□□□□□ -2.19
CDC36YDL165W ESL2P36168 1195 aa1.4□□□□□ -2.19
CDC36YDL165W MRPL40P36534 297 aa1.4□□□□□ -2.19
CDC36YDL165W SHC1P39000 512 aa1.4□□□□□ -2.19
CDC36YDL165W YRB1P41920 201 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W LAM5P43560 674 aa1.4□□□□□ -2.19
CDC36YDL165W SNG1P46950 547 aa1.4□□□□□ -2.19
CDC36YDL165W LSG1P53145 640 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W HOP2P53187 214 aa1.4□□□□□ -2.19
CDC36YDL165W EFM5P53200 248 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W REG1Q00816 1014 aa1.4□□□□□ -2.19
CDC36YDL165W MDM1Q01846 1127 aa1.4□□□□□ -2.19
CDC36YDL165W ELP3Q02908 557 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W SPO19Q03029 223 aa1.4□□□□□ -2.19
CDC36YDL165W EIS1Q05050 843 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W ATG38Q05789 226 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W SSQ1Q05931 657 aaPredicted RBP1.4□□□□□ -2.19
CDC36YDL165W COG4Q06096 861 aa1.4□□□□□ -2.19
CDC36YDL165W ENT4Q07872 247 aa1.4□□□□□ -2.19
CDC36YDL165W CLP1Q08685 445 aaPredicted RBP1.4□□□□□ -2.19
CDC36YDL165W TRM8Q12009 286 aa1.4□□□□□ -2.19
CDC36YDL165W ERV2Q12284 196 aa1.4□□□□□ -2.19
CDC36YDL165W YRM1Q12340 786 aa1.4□□□□□ -2.19
CDC36YDL165W LSO2Q3E772 92 aaKnown RBP1.4□□□□□ -2.19
CDC36YDL165W ATP2P00830 511 aaKnown RBP1.39□□□□□ -2.19
CDC36YDL165W CDC37P06101 506 aaKnown RBP1.39□□□□□ -2.19
CDC36YDL165W ARD1P07347 238 aaPredicted RBP1.39□□□□□ -2.19
CDC36YDL165W RPB2P08518 1224 aaKnown RBP1.39□□□□□ -2.19
CDC36YDL165W RED1P14291 827 aa1.39□□□□□ -2.19
CDC36YDL165W MER1P16523 270 aa1.39□□□□□ -2.19
CDC36YDL165W PET123P17558 318 aa1.39□□□□□ -2.19
CDC36YDL165W MRPS28P21771 286 aa1.39□□□□□ -2.19
CDC36YDL165W SEC14P24280 304 aaKnown RBP1.39□□□□□ -2.19
CDC36YDL165W KRR1P25586 316 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms