RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YAK1P14680 807 aa2.22□□□□□ -2.05
MCD1YDL003W DAP2P18962 818 aa2.22□□□□□ -2.05
MCD1YDL003W OSM1P21375 501 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W MCM3P24279 971 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W SPS22P25380 463 aa2.22□□□□□ -2.05
MCD1YDL003W MCM4P30665 933 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W TPS2P31688 896 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W HXT3P32466 567 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W PRP19P32523 503 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W GCG1P32656 232 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W YKU70P32807 602 aa2.22□□□□□ -2.05
MCD1YDL003W AST1P35183 429 aa2.22□□□□□ -2.05
MCD1YDL003W BLI1P35727 113 aa2.22□□□□□ -2.05
MCD1YDL003W HES1P35843 434 aa2.22□□□□□ -2.05
MCD1YDL003W NAT2P37293 288 aa2.22□□□□□ -2.05
MCD1YDL003W MNN2P38069 597 aa2.22□□□□□ -2.05
MCD1YDL003W YBR225WP38321 900 aa2.22□□□□□ -2.05
MCD1YDL003W SLX1P38324 304 aa2.22□□□□□ -2.05
MCD1YDL003W TRM5P38793 499 aa2.22□□□□□ -2.05
MCD1YDL003W PEX18P38855 283 aa2.22□□□□□ -2.05
MCD1YDL003W ATG7P38862 630 aa2.22□□□□□ -2.05
MCD1YDL003W BFR1P38934 470 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
MCD1YDL003W DUN1P39009 513 aa2.22□□□□□ -2.05
MCD1YDL003W SSO2P39926 295 aa2.22□□□□□ -2.05
MCD1YDL003W YEL025CP39991 1188 aa2.22□□□□□ -2.05
MCD1YDL003W SNZ3P43545 298 aa2.22□□□□□ -2.05
MCD1YDL003W IRC5P43610 853 aa2.22□□□□□ -2.05
MCD1YDL003W POL31P46957 487 aa2.22□□□□□ -2.05
MCD1YDL003W LSM1P47017 172 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W TRF5P48561 642 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W IMD3P50095 523 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W MND1P53102 219 aa2.22□□□□□ -2.05
MCD1YDL003W SNZ2P53824 298 aa2.22□□□□□ -2.05
MCD1YDL003W TOF1P53840 1238 aa2.22□□□□□ -2.05
MCD1YDL003W RTC4P53850 401 aa2.22□□□□□ -2.05
MCD1YDL003W YNL058CP53947 316 aa2.22□□□□□ -2.05
MCD1YDL003W CEG1Q01159 459 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W EGD1Q02642 157 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W PNG1Q02890 363 aa2.22□□□□□ -2.05
MCD1YDL003W ABZ2Q03266 374 aa2.22□□□□□ -2.05
MCD1YDL003W CWC21Q03375 135 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W RCR2Q03446 210 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W TAF9Q05027 157 aa2.22□□□□□ -2.05
MCD1YDL003W ECI1Q05871 280 aa2.22□□□□□ -2.05
MCD1YDL003W YLR407WQ06070 228 aa2.22□□□□□ -2.05
MCD1YDL003W YTH1Q06102 208 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W GRS2Q06817 618 aa2.22□□□□□ -2.05
MCD1YDL003W YDL114WQ07530 308 aa2.22□□□□□ -2.05
MCD1YDL003W YPL191CQ08930 360 aa2.22□□□□□ -2.05
MCD1YDL003W DAS2Q12084 232 aa2.22□□□□□ -2.05
MCD1YDL003W ATG29Q12092 213 aa2.22□□□□□ -2.05
MCD1YDL003W BAG7Q12128 409 aa2.22□□□□□ -2.05
MCD1YDL003W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
MCD1YDL003W SNU23Q12368 194 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W AVL9Q12500 764 aa2.22□□□□□ -2.05
MCD1YDL003W PGA3Q12746 312 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W TY1B-DR3Q99231 1755 aa2.22□□□□□ -2.05
MCD1YDL003W IPP1P00817 287 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W RPS3P05750 240 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W YER190C-BP0CX94 160 aa2.22□□□□□ -2.05
MCD1YDL003W YEL077W-AP0CX95 160 aa2.22□□□□□ -2.05
MCD1YDL003W YGR296C-BP0CX96 160 aa2.22□□□□□ -2.05
MCD1YDL003W YPL283W-BP0CX97 160 aa2.22□□□□□ -2.05
MCD1YDL003W YPR204C-AP0CX98 160 aa2.22□□□□□ -2.05
MCD1YDL003W DBF2P22204 572 aa2.22□□□□□ -2.05
MCD1YDL003W LCB1P25045 558 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W SWI4P25302 1093 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W TFC4P33339 1025 aa2.22□□□□□ -2.05
MCD1YDL003W UBP11P36026 717 aa2.22□□□□□ -2.05
MCD1YDL003W RCN1P36054 211 aa2.22□□□□□ -2.05
MCD1YDL003W NTR2P36118 322 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W CCL1P37366 393 aa2.22□□□□□ -2.05
MCD1YDL003W ETR1P38071 380 aa2.22□□□□□ -2.05
MCD1YDL003W YBR138CP38277 524 aa2.22□□□□□ -2.05
MCD1YDL003W RFC3P38629 340 aa2.22□□□□□ -2.05
MCD1YDL003W RRF1P38771 230 aa2.22□□□□□ -2.05
MCD1YDL003W VMA7P39111 118 aa2.22□□□□□ -2.05
MCD1YDL003W FRT2P39734 528 aa2.22□□□□□ -2.05
MCD1YDL003W VFA1P40080 203 aa2.22□□□□□ -2.05
MCD1YDL003W BUD8P41698 603 aa2.22□□□□□ -2.05
MCD1YDL003W EPL1P43572 832 aa2.22□□□□□ -2.05
MCD1YDL003W IES1P43579 692 aa2.22□□□□□ -2.05
MCD1YDL003W GCD14P46959 383 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W LYS20P48570 428 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W PSP1P50896 841 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W PGA2P53903 129 aa2.22□□□□□ -2.05
MCD1YDL003W REX2P54964 269 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W UTP6Q02354 440 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W EBS1Q03466 884 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W RVB1Q03940 463 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W UTP14Q04500 899 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W DCS1Q06151 350 aa2.22□□□□□ -2.05
MCD1YDL003W SMD2Q06217 110 aaKnown RBP2.22□□□□□ -2.05
MCD1YDL003W DXO1Q06349 442 aa2.22□□□□□ -2.05
MCD1YDL003W MLC2Q06580 163 aa2.22□□□□□ -2.05
MCD1YDL003W PSR2Q07949 397 aa2.22□□□□□ -2.05
MCD1YDL003W CLP1Q08685 445 aaPredicted RBP2.22□□□□□ -2.05
MCD1YDL003W FEX1Q08913 375 aa2.22□□□□□ -2.05
MCD1YDL003W AIM41Q12032 185 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms