RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	FRE1	P32791	686 aa		2.67	□□□□□ -1.98
HMRA1	YCR097W	MTR2	P34232	184 aa	Known RBP	2.67	□□□□□ -1.98
HMRA1	YCR097W	HCS1	P34243	683 aa		2.67	□□□□□ -1.98
HMRA1	YCR097W	SEC24	P40482	926 aa	Known RBP	2.67	□□□□□ -1.98
HMRA1	YCR097W	IST3	P40565	148 aa	Predicted RBP	2.67	□□□□□ -1.98
HMRA1	YCR097W	IME4	P41833	600 aa		2.67	□□□□□ -1.98
HMRA1	YCR097W	ALT2	P52892	507 aa		2.67	□□□□□ -1.98
HMRA1	YCR097W	ERG8	P24521	451 aa		2.66	□□□□□ -1.98
HMRA1	YCR097W	CDC60	P26637	1090 aa	Known RBP	2.66	□□□□□ -1.98
HMRA1	YCR097W	IGO1	P53897	168 aa		2.66	□□□□□ -1.98
HMRA1	YCR097W	HAL1	Q01766	294 aa		2.66	□□□□□ -1.98
HMRA1	YCR097W	VPS74	Q06385	345 aa		2.66	□□□□□ -1.98
HMRA1	YCR097W	ESA1	Q08649	445 aa		2.66	□□□□□ -1.98
HMRA1	YCR097W	YBR085C-A	O43137	85 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	PEP5	P12868	1029 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	PCL1	P24867	279 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	ELO1	P39540	310 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	BUR6	P40096	142 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	PSF2	P40359	213 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	YFL067W	P43537	175 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	TAN1	P53072	289 aa	Predicted RBP	2.65	□□□□□ -1.99
HMRA1	YCR097W	IRC15	Q02733	499 aa		2.65	□□□□□ -1.99
HMRA1	YCR097W	MID2	P36027	376 aa		2.64	□□□□□ -1.99
HMRA1	YCR097W	DUG3	P53871	357 aa		2.64	□□□□□ -1.99
HMRA1	YCR097W	SHR3	Q02774	210 aa		2.64	□□□□□ -1.99
HMRA1	YCR097W	SLD5	Q03406	294 aa		2.64	□□□□□ -1.99
HMRA1	YCR097W	PSK2	Q08217	1101 aa		2.64	□□□□□ -1.99
HMRA1	YCR097W	HIP1	P06775	603 aa		2.63	□□□□□ -1.99
HMRA1	YCR097W	REG1	Q00816	1014 aa		2.63	□□□□□ -1.99
HMRA1	YCR097W	CHS1	P08004	1131 aa		2.62	□□□□□ -1.99
HMRA1	YCR097W	TMA108	P40462	946 aa		2.62	□□□□□ -1.99
HMRA1	YCR097W	BUD32	P53323	261 aa		2.62	□□□□□ -1.99
HMRA1	YCR097W	INA17	Q02888	182 aa		2.62	□□□□□ -1.99
HMRA1	YCR097W	WTM1	Q12363	437 aa	Known RBP	2.62	□□□□□ -1.99
HMRA1	YCR097W	CPR4	P25334	318 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	YCR007C	P25354	239 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	PSD1	P39006	500 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	MET14	Q02196	202 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	RTT109	Q07794	436 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	TEN1	Q07921	160 aa		2.61	□□□□□ -1.99
HMRA1	YCR097W	LEU9	Q12166	604 aa	Known RBP	2.61	□□□□□ -1.99
HMRA1	YCR097W	GAL1	P04385	528 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	YCL049C	P25577	312 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	PAH1	P32567	862 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	SDH3	P33421	198 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	PIM1	P36775	1133 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	VPS4	P52917	437 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	TSR1	Q07381	788 aa	Known RBP	2.6	□□□□□ -1.99
HMRA1	YCR097W	NUS1	Q12063	375 aa		2.6	□□□□□ -1.99
HMRA1	YCR097W	BUD5	P25300	642 aa	Predicted RBP	2.59	□□□□□ -1.99
HMRA1	YCR097W	GWT1	P47026	490 aa		2.59	□□□□□ -1.99
HMRA1	YCR097W	CAF40	P53829	373 aa		2.59	□□□□□ -1.99
HMRA1	YCR097W	ETT1	Q08421	412 aa	Known RBP	2.59	□□□□□ -1.99
HMRA1	YCR097W	LSP1	Q12230	341 aa	Known RBP	2.59	□□□□□ -1.99
HMRA1	YCR097W	YKL023W	P36103	277 aa	Known RBP	2.58	□□□□□ -2
HMRA1	YCR097W	PIR3	Q03180	325 aa		2.58	□□□□□ -2
HMRA1	YCR097W	NUC1	P08466	329 aa		2.57	□□□□□ -2
HMRA1	YCR097W	PET123	P17558	318 aa		2.57	□□□□□ -2
HMRA1	YCR097W	EXO70	P19658	623 aa		2.57	□□□□□ -2
HMRA1	YCR097W	RAD16	P31244	790 aa		2.57	□□□□□ -2
HMRA1	YCR097W	YKL100C	P34248	587 aa		2.57	□□□□□ -2
HMRA1	YCR097W	YNG2	P38806	282 aa	Known RBP	2.57	□□□□□ -2
HMRA1	YCR097W	ELP2	P42935	788 aa		2.57	□□□□□ -2
HMRA1	YCR097W	YJR154W	P47181	346 aa		2.57	□□□□□ -2
HMRA1	YCR097W	RPS7B	P48164	190 aa	Known RBP	2.57	□□□□□ -2
HMRA1	YCR097W	DIA3	P52290	468 aa		2.57	□□□□□ -2
HMRA1	YCR097W	TOF1	P53840	1238 aa		2.57	□□□□□ -2
HMRA1	YCR097W	IVY1	Q04934	453 aa		2.57	□□□□□ -2
HMRA1	YCR097W	TMA7	Q3E764	64 aa	Known RBP	2.57	□□□□□ -2
HMRA1	YCR097W	IFA38	P38286	347 aa		2.56	□□□□□ -2
HMRA1	YCR097W	MUB1	Q03162	620 aa		2.56	□□□□□ -2
HMRA1	YCR097W	HRI1	Q05905	244 aa	Known RBP	2.56	□□□□□ -2
HMRA1	YCR097W	THP3	Q12049	470 aa	Known RBP	2.56	□□□□□ -2
HMRA1	YCR097W	PTP2	P29461	750 aa		2.55	□□□□□ -2
HMRA1	YCR097W	PDB1	P32473	366 aa	Known RBP	2.55	□□□□□ -2
HMRA1	YCR097W	ARC35	P53731	342 aa	Known RBP	2.55	□□□□□ -2
HMRA1	YCR097W	SKG3	Q06315	1026 aa		2.55	□□□□□ -2
HMRA1	YCR097W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
HMRA1	YCR097W	UBC1	P21734	215 aa	Known RBP	2.54	□□□□□ -2
HMRA1	YCR097W	UTR4	P32626	227 aa		2.54	□□□□□ -2
HMRA1	YCR097W	KTR3	P38130	404 aa	Predicted RBP	2.54	□□□□□ -2
HMRA1	YCR097W	DSD1	P53095	428 aa		2.54	□□□□□ -2
HMRA1	YCR097W	PWP1	P21304	576 aa	Known RBP	2.53	□□□□□ -2
HMRA1	YCR097W	ADH7	P25377	361 aa		2.53	□□□□□ -2
HMRA1	YCR097W	NAT2	P37293	288 aa		2.53	□□□□□ -2
HMRA1	YCR097W	PEX8	P53248	589 aa		2.53	□□□□□ -2
HMRA1	YCR097W	PIL1	P53252	339 aa	Known RBP	2.53	□□□□□ -2
HMRA1	YCR097W	MRPL13	Q02204	264 aa		2.53	□□□□□ -2
HMRA1	YCR097W	PSR1	Q07800	427 aa		2.53	□□□□□ -2
HMRA1	YCR097W	NCE102	Q12207	173 aa	RIP-Chip data	2.53	□□□□□ -2	not detected
HMRA1	YCR097W	YBL111C	Q3E7Y5	667 aa		2.53	□□□□□ -2
HMRA1	YCR097W	BI3	Q9ZZW7	517 aa		2.53	□□□□□ -2
HMRA1	YCR097W	SUC2	P00724	532 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	MTF2	P10849	440 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	YHL041W	P38730	149 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	SLZ1	P40167	298 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	PAN6	P40459	309 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	DRN1	P53255	507 aa	Known RBP	2.52	□□□□□ -2.01
HMRA1	YCR097W	RSN1	Q03516	953 aa		2.52	□□□□□ -2.01
HMRA1	YCR097W	TFC6	Q06339	672 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms