RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 GLO2Q05584 274 aa-0.94□□□□□ -2.56
snR53snR53 RRP6Q12149 733 aaKnown RBP-0.94□□□□□ -2.56
snR53snR53 RPS8AP0CX39 200 aaKnown RBP-0.95□□□□□ -2.56
snR53snR53 RPS8BP0CX40 200 aaKnown RBP-0.95□□□□□ -2.56
snR53snR53 APE1P14904 514 aa-0.95□□□□□ -2.56
snR53snR53 MSH2P25847 964 aa-0.95□□□□□ -2.56
snR53snR53 NAT2P37293 288 aa-0.95□□□□□ -2.56
snR53snR53 UBP12P39538 1254 aa-0.95□□□□□ -2.56
snR53snR53 STB1P42845 420 aa-0.95□□□□□ -2.56
snR53snR53 DLD2P46681 530 aaKnown RBP-0.95□□□□□ -2.56
snR53snR53 YJL144WP47009 104 aa-0.95□□□□□ -2.56
snR53snR53 RNR4P49723 345 aaKnown RBP-0.95□□□□□ -2.56
snR53snR53 MRPS16Q02608 121 aa-0.95□□□□□ -2.56
snR53snR53 PIR3Q03180 325 aa-0.95□□□□□ -2.56
snR53snR53 SWA2Q06677 668 aa-0.95□□□□□ -2.56
snR53snR53 AIM6Q07716 390 aa-0.95□□□□□ -2.56
snR53snR53 CWC2Q12046 339 aaPredicted RBP-0.95□□□□□ -2.56
snR53snR53 VAS1P07806 1104 aaKnown RBP-0.96□□□□□ -2.56
snR53snR53 AGA2P32781 87 aa-0.96□□□□□ -2.56
snR53snR53 TIM23P32897 222 aa-0.96□□□□□ -2.56
snR53snR53 ARP1P38696 384 aa-0.96□□□□□ -2.56
snR53snR53 YER184CP39961 794 aa-0.96□□□□□ -2.56
snR53snR53 SEC9P40357 651 aa-0.96□□□□□ -2.56
snR53snR53 DFG10P40526 253 aa-0.96□□□□□ -2.56
snR53snR53 MAD2P40958 196 aa-0.96□□□□□ -2.56
snR53snR53 DCP2P53550 970 aaKnown RBP-0.96□□□□□ -2.56
snR53snR53 CAF40P53829 373 aa-0.96□□□□□ -2.56
snR53snR53 GOR1P53839 350 aa-0.96□□□□□ -2.56
snR53snR53 RPN4Q03465 531 aa-0.96□□□□□ -2.56
snR53snR53 ADE13Q05911 482 aaKnown RBP-0.96□□□□□ -2.56
snR53snR53 MRPL51Q06090 140 aaPredicted RBP-0.96□□□□□ -2.56
snR53snR53 CBP6P07253 162 aaPredicted RBP-0.97□□□□□ -2.56
snR53snR53 APA1P16550 321 aaKnown RBP-0.97□□□□□ -2.56
snR53snR53 DPH2P32461 534 aa-0.97□□□□□ -2.56
snR53snR53 NPL6P32832 435 aa-0.97□□□□□ -2.56
snR53snR53 MNS1P32906 549 aa-0.97□□□□□ -2.56
snR53snR53 MRX1P40050 688 aa-0.97□□□□□ -2.56
snR53snR53 SCC4P40090 624 aa-0.97□□□□□ -2.56
snR53snR53 MGS1P40151 587 aa-0.97□□□□□ -2.56
snR53snR53 RIC1P40395 1056 aa-0.97□□□□□ -2.56
snR53snR53 HEF3P53978 1044 aaKnown RBP-0.97□□□□□ -2.56
snR53snR53 CDC53Q12018 815 aaKnown RBP-0.97□□□□□ -2.56
snR53snR53 ART10P18634 518 aaKnown RBP-0.98□□□□□ -2.57
snR53snR53 SNF6P18888 332 aa-0.98□□□□□ -2.57
snR53snR53 URK1P27515 501 aa-0.98□□□□□ -2.57
snR53snR53 IES6P32617 166 aa-0.98□□□□□ -2.57
snR53snR53 PPQ1P32945 549 aa-0.98□□□□□ -2.57
snR53snR53 UBA4P38820 440 aa-0.98□□□□□ -2.57
snR53snR53 PRM5P40476 318 aa-0.98□□□□□ -2.57
snR53snR53 YFL012WP43580 148 aa-0.98□□□□□ -2.57
snR53snR53 NNF2P53253 936 aa-0.98□□□□□ -2.57
snR53snR53 HXT11P54862 567 aa-0.98□□□□□ -2.57
snR53snR53 SLG1P54867 378 aa-0.98□□□□□ -2.57
snR53snR53 RGM1Q00453 211 aa-0.98□□□□□ -2.57
snR53snR53 ARG81P05085 880 aa-0.99□□□□□ -2.57
snR53snR53 SRP54P20424 541 aaKnown RBP-0.99□□□□□ -2.57
snR53snR53 PHO84P25297 587 aaKnown RBP-0.99□□□□□ -2.57
snR53snR53 FRE1P32791 686 aa-0.99□□□□□ -2.57
snR53snR53 REC114P32841 428 aa-0.99□□□□□ -2.57
snR53snR53 SER1P33330 395 aaKnown RBP-0.99□□□□□ -2.57
snR53snR53 SOF1P33750 489 aaKnown RBP-0.99□□□□□ -2.57
snR53snR53 ROT2P38138 954 aa-0.99□□□□□ -2.57
snR53snR53 STL1P39932 569 aa-0.99□□□□□ -2.57
snR53snR53 FMP10P40098 244 aa-0.99□□□□□ -2.57
snR53snR53 VPS54Q12071 889 aa-0.99□□□□□ -2.57
snR53snR53 YDR061WQ12298 539 aa-0.99□□□□□ -2.57
snR53snR53 DID4P36108 232 aa-1□□□□□ -2.57
snR53snR53 UME6P39001 836 aa-1□□□□□ -2.57
snR53snR53 AIM10P39965 576 aaKnown RBP-1□□□□□ -2.57
snR53snR53 GZF3P42944 551 aaKnown RBP-1□□□□□ -2.57
snR53snR53 YFR020WP43600 232 aa-1□□□□□ -2.57
snR53snR53 NCA3P46955 337 aa-1□□□□□ -2.57
snR53snR53 NUP57P48837 541 aa-1□□□□□ -2.57
snR53snR53 SDA1P53313 767 aaKnown RBP-1□□□□□ -2.57
snR53snR53 CBK1P53894 756 aa-1□□□□□ -2.57
snR53snR53 YMR160WQ03823 816 aa-1□□□□□ -2.57
snR53snR53 IRC25Q07951 179 aa-1□□□□□ -2.57
snR53snR53 NOP8Q08287 484 aaPredicted RBP-1□□□□□ -2.57
snR53snR53 DBP10Q12389 995 aaKnown RBP-1□□□□□ -2.57
snR53snR53 ADH3P07246 375 aaKnown RBP-1.01□□□□□ -2.57
snR53snR53 MKK1P32490 508 aa-1.01□□□□□ -2.57
snR53snR53 CYM1P32898 989 aa-1.01□□□□□ -2.57
snR53snR53 LAG1P38703 411 aa-1.01□□□□□ -2.57
snR53snR53 VHS2P40463 436 aa-1.01□□□□□ -2.57
snR53snR53 HER2Q03557 464 aa-1.01□□□□□ -2.57
snR53snR53 BNA5Q05979 453 aa-1.01□□□□□ -2.57
snR53snR53 VPS74Q06385 345 aa-1.01□□□□□ -2.57
snR53snR53 DNL4Q08387 944 aaPredicted RBP-1.01□□□□□ -2.57
snR53snR53 HEM12P32347 362 aaPredicted RBP-1.02□□□□□ -2.57
snR53snR53 MIG3P39943 394 aa-1.02□□□□□ -2.57
snR53snR53 ECM10P39987 644 aa-1.02□□□□□ -2.57
snR53snR53 MNN11P46985 422 aaKnown RBP-1.02□□□□□ -2.57
snR53snR53 YNL193WP53870 558 aa-1.02□□□□□ -2.57
snR53snR53 YVH1Q02256 364 aaKnown RBP-1.02□□□□□ -2.57
snR53snR53 MLC2Q06580 163 aa-1.02□□□□□ -2.57
snR53snR53 ICL2Q12031 575 aa-1.02□□□□□ -2.57
snR53snR53 COX4P04037 155 aa-1.03□□□□□ -2.57
snR53snR53 SPT10P35208 640 aa-1.03□□□□□ -2.57
snR53snR53 FRT2P39734 528 aa-1.03□□□□□ -2.57
snR53snR53 SCD6P45978 349 aaKnown RBP RIP-Chip data-1.03□□□□□ -2.57not detected
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms