RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	CNM67	P53865	581 aa	Known RBP	0.7	□□□□□ -2.3
snR48	snR48	INN1	P53901	409 aa		0.7	□□□□□ -2.3
snR48	snR48	TSA2	Q04120	196 aa		0.7	□□□□□ -2.3
snR48	snR48	YOL057W	Q08225	711 aa		0.7	□□□□□ -2.3
snR48	snR48	WTM1	Q12363	437 aa	Known RBP	0.7	□□□□□ -2.3
snR48	snR48	LPD1	P09624	499 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	SPE2	P21182	396 aa		0.69	□□□□□ -2.3
snR48	snR48	CDC60	P26637	1090 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	PAH1	P32567	862 aa		0.69	□□□□□ -2.3
snR48	snR48	SEF1	P34228	1148 aa		0.69	□□□□□ -2.3
snR48	snR48	PIM1	P36775	1133 aa		0.69	□□□□□ -2.3
snR48	snR48	TMA108	P40462	946 aa		0.69	□□□□□ -2.3
snR48	snR48	PKP1	P40530	394 aa		0.69	□□□□□ -2.3
snR48	snR48	SMM1	P53720	384 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	CEG1	Q01159	459 aa	Predicted RBP	0.69	□□□□□ -2.3
snR48	snR48	YVH1	Q02256	364 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	EMI2	Q04409	500 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	TSR1	Q07381	788 aa	Known RBP	0.69	□□□□□ -2.3
snR48	snR48	SYO1	Q07395	620 aa		0.69	□□□□□ -2.3
snR48	snR48	YDL009C	Q12210	107 aa		0.69	□□□□□ -2.3
snR48	snR48	MIS1	P09440	975 aa	Known RBP	0.68	□□□□□ -2.3
snR48	snR48	HEM15	P16622	393 aa		0.68	□□□□□ -2.3
snR48	snR48	PET123	P17558	318 aa		0.68	□□□□□ -2.3
snR48	snR48	CPR4	P25334	318 aa		0.68	□□□□□ -2.3
snR48	snR48	TFC3	P34111	1160 aa		0.68	□□□□□ -2.3
snR48	snR48	YKL050C	P35736	922 aa		0.68	□□□□□ -2.3
snR48	snR48	GEX2	P36173	615 aa		0.68	□□□□□ -2.3
snR48	snR48	KTR3	P38130	404 aa	Predicted RBP	0.68	□□□□□ -2.3
snR48	snR48	FSH1	P38777	243 aa	Known RBP	0.68	□□□□□ -2.3
snR48	snR48	UBP12	P39538	1254 aa		0.68	□□□□□ -2.3
snR48	snR48	RPN11	P43588	306 aa	Known RBP	0.68	□□□□□ -2.3
snR48	snR48	COG6	P53959	839 aa		0.68	□□□□□ -2.3
snR48	snR48	MRPL51	Q06090	140 aa	Predicted RBP	0.68	□□□□□ -2.3
snR48	snR48	ESA1	Q08649	445 aa		0.68	□□□□□ -2.3
snR48	snR48	TMA16	Q08687	178 aa		0.68	□□□□□ -2.3
snR48	snR48	RRP6	Q12149	733 aa	Known RBP	0.68	□□□□□ -2.3
snR48	snR48	TMA17	Q12513	150 aa		0.68	□□□□□ -2.3
snR48	snR48	YBL111C	Q3E7Y5	667 aa		0.68	□□□□□ -2.3
snR48	snR48	ARG81	P05085	880 aa		0.67	□□□□□ -2.3
snR48	snR48	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
snR48	snR48	RNA14	P25298	677 aa	Known RBP	0.67	□□□□□ -2.3
snR48	snR48	CDC15	P27636	974 aa		0.67	□□□□□ -2.3
snR48	snR48	FRE1	P32791	686 aa		0.67	□□□□□ -2.3
snR48	snR48	APM3	P38153	483 aa		0.67	□□□□□ -2.3
snR48	snR48	DBP8	P38719	431 aa		0.67	□□□□□ -2.3
snR48	snR48	HAT2	P39984	401 aa		0.67	□□□□□ -2.3
snR48	snR48	REE1	P40893	198 aa		0.67	□□□□□ -2.3
snR48	snR48	DPB11	P47027	764 aa	Predicted RBP	0.67	□□□□□ -2.3
snR48	snR48	IMA1	P53051	589 aa		0.67	□□□□□ -2.3
snR48	snR48	PEX14	P53112	341 aa		0.67	□□□□□ -2.3
snR48	snR48	DUG3	P53871	357 aa		0.67	□□□□□ -2.3
snR48	snR48	ECM30	Q06673	1274 aa		0.67	□□□□□ -2.3
snR48	snR48	YPR091C	Q06833	770 aa		0.67	□□□□□ -2.3
snR48	snR48	IES4	Q08561	116 aa		0.67	□□□□□ -2.3
snR48	snR48	RFM1	Q12192	310 aa		0.67	□□□□□ -2.3
snR48	snR48	PRM7	Q12459	698 aa		0.67	□□□□□ -2.3
snR48	snR48	AMD1	P15274	810 aa	Known RBP	0.66	□□□□□ -2.3
snR48	snR48	PFK2	P16862	959 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
snR48	snR48	SRB5	P32585	307 aa		0.66	□□□□□ -2.3
snR48	snR48	CHK1	P38147	527 aa		0.66	□□□□□ -2.3
snR48	snR48	VID24	P38263	362 aa		0.66	□□□□□ -2.3
snR48	snR48	ENP1	P38333	483 aa	Known RBP	0.66	□□□□□ -2.3
snR48	snR48	WWM1	P43582	211 aa	Known RBP	0.66	□□□□□ -2.3
snR48	snR48	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
snR48	snR48	RPS10B	P46784	105 aa	Known RBP	0.66	□□□□□ -2.3
snR48	snR48	ASE1	P50275	885 aa		0.66	□□□□□ -2.3
snR48	snR48	TOF1	P53840	1238 aa		0.66	□□□□□ -2.3
snR48	snR48	RHO4	Q00246	291 aa		0.66	□□□□□ -2.3
snR48	snR48	IRC15	Q02733	499 aa		0.66	□□□□□ -2.3
snR48	snR48	PEX25	Q02969	394 aa		0.66	□□□□□ -2.3
snR48	snR48	PIR3	Q03180	325 aa		0.66	□□□□□ -2.3
snR48	snR48	ATG9	Q12142	997 aa		0.66	□□□□□ -2.3
snR48	snR48	HIP1	P06775	603 aa		0.65	□□□□□ -2.31
snR48	snR48	PUT2	P07275	575 aa		0.65	□□□□□ -2.31
snR48	snR48	CHS1	P08004	1131 aa		0.65	□□□□□ -2.31
snR48	snR48	SDH3	P33421	198 aa		0.65	□□□□□ -2.31
snR48	snR48	FAF1	P40546	346 aa	Predicted RBP	0.65	□□□□□ -2.31
snR48	snR48	PYK2	P52489	506 aa	Known RBP	0.65	□□□□□ -2.31
snR48	snR48	TEP1	P53916	434 aa		0.65	□□□□□ -2.31
snR48	snR48	TRS130	Q03660	1102 aa		0.65	□□□□□ -2.31
snR48	snR48	RPC11	Q04307	110 aa	Predicted RBP	0.65	□□□□□ -2.31
snR48	snR48	HRI1	Q05905	244 aa	Known RBP	0.65	□□□□□ -2.31
snR48	snR48	VPS74	Q06385	345 aa		0.65	□□□□□ -2.31
snR48	snR48	SDH5	Q08230	162 aa		0.65	□□□□□ -2.31
snR48	snR48	INP53	Q12271	1107 aa		0.65	□□□□□ -2.31
snR48	snR48	YOL114C	Q12322	202 aa		0.65	□□□□□ -2.31
snR48	snR48	CCH1	P50077	2039 aa		0.65	□□□□□ -2.31
snR48	snR48	SGV1	P23293	657 aa	Known RBP	0.64	□□□□□ -2.31
snR48	snR48	DAL2	P25335	343 aa		0.64	□□□□□ -2.31
snR48	snR48	NAT2	P37293	288 aa		0.64	□□□□□ -2.31
snR48	snR48	YBR138C	P38277	524 aa		0.64	□□□□□ -2.31
snR48	snR48	FMP10	P40098	244 aa		0.64	□□□□□ -2.31
snR48	snR48	PFK26	P40433	827 aa	Known RBP	0.64	□□□□□ -2.31
snR48	snR48	PAN6	P40459	309 aa		0.64	□□□□□ -2.31
snR48	snR48	ELP2	P42935	788 aa		0.64	□□□□□ -2.31
snR48	snR48	COG1	P53079	417 aa		0.64	□□□□□ -2.31
snR48	snR48	CAF40	P53829	373 aa		0.64	□□□□□ -2.31
snR48	snR48	ZDS2	P54786	942 aa		0.64	□□□□□ -2.31
snR48	snR48	RSM23	Q01163	450 aa		0.64	□□□□□ -2.31
snR48	snR48	SHR3	Q02774	210 aa		0.64	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms