RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W MYO5Q04439 1219 aaKnown RBP1.74□□□□□ -2.13
CTF4YPR135W GAD1Q04792 585 aa1.74□□□□□ -2.13
CTF4YPR135W YPS7Q06325 596 aa1.74□□□□□ -2.13
CTF4YPR135W CRD1Q07560 283 aa1.74□□□□□ -2.13
CTF4YPR135W CDC45Q08032 650 aa1.74□□□□□ -2.13
CTF4YPR135W THI21Q08975 551 aa1.74□□□□□ -2.13
CTF4YPR135W HIS4P00815 799 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W CPA2P03965 1118 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W MET17P06106 444 aa1.73□□□□□ -2.13
CTF4YPR135W ADE3P07245 946 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W FUR1P18562 216 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W ACO1P19414 778 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
CTF4YPR135W GCD7P32502 381 aaPredicted RBP1.73□□□□□ -2.13
CTF4YPR135W XRS2P33301 854 aa1.73□□□□□ -2.13
CTF4YPR135W PEX5P35056 612 aa1.73□□□□□ -2.13
CTF4YPR135W OSW5P40219 148 aa1.73□□□□□ -2.13
CTF4YPR135W SIP4P46954 829 aa1.73□□□□□ -2.13
CTF4YPR135W SET2P46995 733 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W MDE1P47095 244 aa1.73□□□□□ -2.13
CTF4YPR135W YJR039WP47107 1121 aa1.73□□□□□ -2.13
CTF4YPR135W MNT2P53059 558 aa1.73□□□□□ -2.13
CTF4YPR135W MTL1P53214 551 aa1.73□□□□□ -2.13
CTF4YPR135W BTN2P53286 410 aa1.73□□□□□ -2.13
CTF4YPR135W SPC98P53540 846 aa1.73□□□□□ -2.13
CTF4YPR135W CBK1P53894 756 aa1.73□□□□□ -2.13
CTF4YPR135W MRPL13Q02204 264 aa1.73□□□□□ -2.13
CTF4YPR135W SNO4Q04902 237 aa1.73□□□□□ -2.13
CTF4YPR135W YLR407WQ06070 228 aa1.73□□□□□ -2.13
CTF4YPR135W MCP2Q06567 569 aa1.73□□□□□ -2.13
CTF4YPR135W YOL024WQ08172 172 aa1.73□□□□□ -2.13
CTF4YPR135W HSP33Q08914 237 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W YPL272CQ08984 517 aa1.73□□□□□ -2.13
CTF4YPR135W HSP32Q08992 237 aa1.73□□□□□ -2.13
CTF4YPR135W TRA1P38811 3744 aa1.73□□□□□ -2.13
CTF4YPR135W SES1P07284 462 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W YEL076C-AP0CX16 216 aa1.73□□□□□ -2.13
CTF4YPR135W YLR464WP0CX17 216 aa1.73□□□□□ -2.13
CTF4YPR135W RED1P14291 827 aa1.73□□□□□ -2.13
CTF4YPR135W IME1P21190 360 aa1.73□□□□□ -2.13
CTF4YPR135W ROX1P25042 368 aa1.73□□□□□ -2.13
CTF4YPR135W SDS22P36047 338 aa1.73□□□□□ -2.13
CTF4YPR135W BYE1P36106 594 aa1.73□□□□□ -2.13
CTF4YPR135W MUP3P38734 546 aa1.73□□□□□ -2.13
CTF4YPR135W RRF1P38771 230 aa1.73□□□□□ -2.13
CTF4YPR135W HRB1P38922 454 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
CTF4YPR135W STL1P39932 569 aa1.73□□□□□ -2.13
CTF4YPR135W YEL076CP39971 216 aa1.73□□□□□ -2.13
CTF4YPR135W FET5P43561 622 aa1.73□□□□□ -2.13
CTF4YPR135W BIR1P47134 954 aa1.73□□□□□ -2.13
CTF4YPR135W YGL242CP53066 181 aa1.73□□□□□ -2.13
CTF4YPR135W YNR071CP53757 342 aa1.73□□□□□ -2.13
CTF4YPR135W REC102Q02721 264 aa1.73□□□□□ -2.13
CTF4YPR135W HER2Q03557 464 aa1.73□□□□□ -2.13
CTF4YPR135W YMR155WQ03795 547 aa1.73□□□□□ -2.13
CTF4YPR135W YDL057WQ07379 328 aa1.73□□□□□ -2.13
CTF4YPR135W DBP10Q12389 995 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W POL2P21951 2222 aaKnown RBP1.73□□□□□ -2.13
CTF4YPR135W FUM1P08417 488 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W MSF1P08425 469 aa1.72□□□□□ -2.13
CTF4YPR135W RPL19AP0CX82 189 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W RPL19BP0CX83 189 aaPredicted RBP1.72□□□□□ -2.13
CTF4YPR135W PRP22P24384 1145 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W DGR2P32330 852 aa1.72□□□□□ -2.13
CTF4YPR135W AAP1P37898 856 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W SRP68P38687 599 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W ECM1P39715 212 aa1.72□□□□□ -2.13
CTF4YPR135W SAW1P39735 261 aa1.72□□□□□ -2.13
CTF4YPR135W TIF34P40217 347 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W ERG10P41338 398 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W MEP2P41948 499 aa1.72□□□□□ -2.13
CTF4YPR135W SAE2P46946 345 aa1.72□□□□□ -2.13
CTF4YPR135W PRP31P49704 494 aaPredicted RBP1.72□□□□□ -2.13
CTF4YPR135W MRK1P50873 501 aa1.72□□□□□ -2.13
CTF4YPR135W MNP1P53163 194 aaPredicted RBP1.72□□□□□ -2.13
CTF4YPR135W PRP3Q03338 469 aaPredicted RBP1.72□□□□□ -2.13
CTF4YPR135W STP4Q07351 490 aa1.72□□□□□ -2.13
CTF4YPR135W FMP45Q07651 309 aa1.72□□□□□ -2.13
CTF4YPR135W CUE5Q08412 411 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W SLK19Q08581 821 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W HSP42Q12329 375 aa1.72□□□□□ -2.13
CTF4YPR135W SMC6Q12749 1114 aa1.72□□□□□ -2.13
CTF4YPR135W YOL159C-AQ3E769 90 aa1.72□□□□□ -2.13
CTF4YPR135W HFA1P32874 2273 aa1.72□□□□□ -2.13
CTF4YPR135W COX3P00420 269 aa1.72□□□□□ -2.13
CTF4YPR135W PHO5P00635 467 aa1.72□□□□□ -2.13
CTF4YPR135W GAL80P04387 435 aa1.72□□□□□ -2.13
CTF4YPR135W VAS1P07806 1104 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W ERG20P08524 352 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W SUI3P09064 285 aaKnown RBP1.72□□□□□ -2.13
CTF4YPR135W CKA1P15790 372 aa1.72□□□□□ -2.13
CTF4YPR135W PDX1P16451 410 aa1.72□□□□□ -2.13
CTF4YPR135W CLB4P24871 460 aa1.72□□□□□ -2.13
CTF4YPR135W MTC7P32633 139 aa1.72□□□□□ -2.13
CTF4YPR135W PHO11P35842 467 aa1.72□□□□□ -2.13
CTF4YPR135W MRPL40P36534 297 aa1.72□□□□□ -2.13
CTF4YPR135W MRX3P38172 270 aa1.72□□□□□ -2.13
CTF4YPR135W SIF2P38262 535 aa1.72□□□□□ -2.13
CTF4YPR135W PHO12P38693 467 aa1.72□□□□□ -2.13
CTF4YPR135W VPS25P47142 202 aa1.72□□□□□ -2.13
CTF4YPR135W ATP22P50273 684 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms