RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SMD2Q06217 110 aaKnown RBP3.67□□□□□ -1.82
RPA43YOR340C ENT4Q07872 247 aa3.67□□□□□ -1.82
RPA43YOR340C SDH5Q08230 162 aa3.67□□□□□ -1.82
RPA43YOR340C NBP2Q12163 236 aa3.67□□□□□ -1.82
RPA43YOR340C PRS5Q12265 496 aaKnown RBP3.67□□□□□ -1.82
RPA43YOR340C SKM1Q12469 655 aa3.67□□□□□ -1.82
RPA43YOR340C RTP1Q12751 981 aa3.67□□□□□ -1.82
RPA43YOR340C YDR524C-BQ3E6R4 66 aa3.67□□□□□ -1.82
RPA43YOR340C CDC31P06704 161 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C RNR2P09938 399 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C YML003WP0CF16 290 aa3.66□□□□□ -1.82
RPA43YOR340C MET8P15807 274 aa3.66□□□□□ -1.82
RPA43YOR340C MBR1P23493 339 aa3.66□□□□□ -1.82
RPA43YOR340C LRE1P25579 583 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C SIP1P32578 815 aa3.66□□□□□ -1.82
RPA43YOR340C HOT13P36078 116 aa3.66□□□□□ -1.82
RPA43YOR340C GEX2P36173 615 aa3.66□□□□□ -1.82
RPA43YOR340C ERC1P38767 581 aa3.66□□□□□ -1.82
RPA43YOR340C GAA1P39012 614 aa3.66□□□□□ -1.82
RPA43YOR340C PFK26P40433 827 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C GPD2P41911 440 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C SIP4P46954 829 aa3.66□□□□□ -1.82
RPA43YOR340C COG2P53271 262 aa3.66□□□□□ -1.82
RPA43YOR340C AAT1Q01802 451 aa3.66□□□□□ -1.82
RPA43YOR340C VPS20Q04272 221 aa3.66□□□□□ -1.82
RPA43YOR340C YML053CQ04978 212 aa3.66□□□□□ -1.82
RPA43YOR340C THI7Q05998 598 aa3.66□□□□□ -1.82
RPA43YOR340C YDL242WQ07746 117 aa3.66□□□□□ -1.82
RPA43YOR340C PSK2Q08217 1101 aa3.66□□□□□ -1.82
RPA43YOR340C SWT1Q12104 458 aa3.66□□□□□ -1.82
RPA43YOR340C ERG27Q12452 347 aaKnown RBP3.66□□□□□ -1.82
RPA43YOR340C HSP82P02829 709 aaKnown RBP3.65□□□□□ -1.83
RPA43YOR340C RPL19AP0CX82 189 aaKnown RBP3.65□□□□□ -1.83
RPA43YOR340C RPL19BP0CX83 189 aaPredicted RBP3.65□□□□□ -1.83
RPA43YOR340C KGD2P19262 463 aaPredicted RBP3.65□□□□□ -1.83
RPA43YOR340C NUP1P20676 1076 aa3.65□□□□□ -1.83
RPA43YOR340C RFA2P26754 273 aaKnown RBP3.65□□□□□ -1.83
RPA43YOR340C ALY1P36117 915 aa3.65□□□□□ -1.83
RPA43YOR340C OPY1P38271 328 aa3.65□□□□□ -1.83
RPA43YOR340C TVP23P38962 199 aa3.65□□□□□ -1.83
RPA43YOR340C LAS21P40367 830 aa3.65□□□□□ -1.83
RPA43YOR340C ULP2P40537 1034 aaPredicted RBP3.65□□□□□ -1.83
RPA43YOR340C ARC1P46672 376 aaKnown RBP3.65□□□□□ -1.83
RPA43YOR340C SRB7P47822 140 aa3.65□□□□□ -1.83
RPA43YOR340C RET3P53600 189 aa3.65□□□□□ -1.83
RPA43YOR340C TIM10P87108 93 aa3.65□□□□□ -1.83
RPA43YOR340C YSA1Q01976 231 aa3.65□□□□□ -1.83
RPA43YOR340C ATG23Q06671 453 aa3.65□□□□□ -1.83
RPA43YOR340C YPL150WQ12152 901 aa3.65□□□□□ -1.83
RPA43YOR340C GET3Q12154 354 aaKnown RBP3.65□□□□□ -1.83
RPA43YOR340C LCB4Q12246 624 aa3.65□□□□□ -1.83
RPA43YOR340C Q0010Q9ZZX9 128 aa3.65□□□□□ -1.83
RPA43YOR340C YPR117WQ06116 2489 aa3.64□□□□□ -1.83
RPA43YOR340C TY1B-AO13527 1196 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C AQY1P0CD91 305 aa3.64□□□□□ -1.83
RPA43YOR340C CDC24P11433 854 aaPredicted RBP3.64□□□□□ -1.83
RPA43YOR340C SAC6P32599 642 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C RPF2P36160 344 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C SAP1P39955 897 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C YIR014WP40570 242 aa3.64□□□□□ -1.83
RPA43YOR340C DUO1P53168 247 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C YNR061CP53747 219 aa3.64□□□□□ -1.83
RPA43YOR340C BNI5P53890 448 aaKnown RBP3.64□□□□□ -1.83
RPA43YOR340C RAD30Q04049 632 aa3.64□□□□□ -1.83
RPA43YOR340C ORM2Q06144 216 aa3.64□□□□□ -1.83
RPA43YOR340C NUS1Q12063 375 aa3.64□□□□□ -1.83
RPA43YOR340C YOR019WQ99248 730 aa3.64□□□□□ -1.83
RPA43YOR340C YLR422WQ06409 1932 aa3.64□□□□□ -1.83
RPA43YOR340C COX1P00401 534 aa3.63□□□□□ -1.83
RPA43YOR340C BI2P03873 423 aa3.63□□□□□ -1.83
RPA43YOR340C THR4P16120 514 aaKnown RBP3.63□□□□□ -1.83
RPA43YOR340C MDM10P18409 493 aa3.63□□□□□ -1.83
RPA43YOR340C RRP43P25359 394 aaPredicted RBP3.63□□□□□ -1.83
RPA43YOR340C SGF29P25554 259 aa3.63□□□□□ -1.83
RPA43YOR340C POT1P27796 417 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
RPA43YOR340C SRB5P32585 307 aa3.63□□□□□ -1.83
RPA43YOR340C TFC3P34111 1160 aa3.63□□□□□ -1.83
RPA43YOR340C TVP38P36164 337 aa3.63□□□□□ -1.83
RPA43YOR340C MAL33P38157 468 aa3.63□□□□□ -1.83
RPA43YOR340C APD1P38281 316 aa3.63□□□□□ -1.83
RPA43YOR340C EXO1P39875 702 aa3.63□□□□□ -1.83
RPA43YOR340C UBP7P40453 1071 aa3.63□□□□□ -1.83
RPA43YOR340C DJP1P40564 432 aa3.63□□□□□ -1.83
RPA43YOR340C TDA10P42938 290 aa3.63□□□□□ -1.83
RPA43YOR340C AAD10P47182 288 aa3.63□□□□□ -1.83
RPA43YOR340C AZR1P50080 613 aa3.63□□□□□ -1.83
RPA43YOR340C ATP23P53722 227 aa3.63□□□□□ -1.83
RPA43YOR340C RAD33Q04231 177 aa3.63□□□□□ -1.83
RPA43YOR340C SEG1Q04279 960 aa3.63□□□□□ -1.83
RPA43YOR340C YBR126W-AQ8TGU7 68 aa3.63□□□□□ -1.83
RPA43YOR340C LAA1P39526 2014 aa3.63□□□□□ -1.83
RPA43YOR340C PGK1P00560 416 aaKnown RBP3.62□□□□□ -1.83
RPA43YOR340C SES1P07284 462 aaKnown RBP3.62□□□□□ -1.83
RPA43YOR340C SUI3P09064 285 aaKnown RBP3.62□□□□□ -1.83
RPA43YOR340C CLN3P13365 580 aa3.62□□□□□ -1.83
RPA43YOR340C OLE1P21147 510 aaKnown RBP3.62□□□□□ -1.83
RPA43YOR340C RDS1P25611 832 aa3.62□□□□□ -1.83
RPA43YOR340C CMK1P27466 446 aaKnown RBP3.62□□□□□ -1.83
RPA43YOR340C MFT1P33441 392 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms