RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C REC8Q12188 680 aa9.38□□□□□ -0.91
SPT20YOL148C APC2Q12440 853 aa9.38□□□□□ -0.91
SPT20YOL148C IZH4Q99393 312 aa9.38□□□□□ -0.91
SPT20YOL148C GSC2P40989 1895 aa9.38□□□□□ -0.91
SPT20YOL148C ART10P18634 518 aaKnown RBP9.38□□□□□ -0.91
SPT20YOL148C PEX1P24004 1043 aa9.38□□□□□ -0.91
SPT20YOL148C KIN82P25341 720 aa9.38□□□□□ -0.91
SPT20YOL148C YCL049CP25577 312 aa9.38□□□□□ -0.91
SPT20YOL148C SPT14P32363 452 aa9.38□□□□□ -0.91
SPT20YOL148C FIR1P40020 876 aa9.38□□□□□ -0.91
SPT20YOL148C VMA13P41807 478 aaKnown RBP9.38□□□□□ -0.91
SPT20YOL148C KEL2P50090 882 aa9.38□□□□□ -0.91
SPT20YOL148C VAC7P53950 1165 aa9.38□□□□□ -0.91
SPT20YOL148C YNG1Q08465 219 aa9.38□□□□□ -0.91
SPT20YOL148C YOR214CQ12282 236 aa9.38□□□□□ -0.91
SPT20YOL148C COS2P0CX12 379 aa9.37□□□□□ -0.91
SPT20YOL148C COS3P0CX13 379 aa9.37□□□□□ -0.91
SPT20YOL148C ABF1P14164 731 aa9.37□□□□□ -0.91
SPT20YOL148C DBR1P24309 405 aaKnown RBP9.37□□□□□ -0.91
SPT20YOL148C PAH1P32567 862 aa9.37□□□□□ -0.91
SPT20YOL148C UTR2P32623 467 aa9.37□□□□□ -0.91
SPT20YOL148C GLY1P37303 387 aaKnown RBP9.37□□□□□ -0.91
SPT20YOL148C YMC2P38087 329 aa9.37□□□□□ -0.91
SPT20YOL148C SPF1P39986 1215 aaKnown RBP9.37□□□□□ -0.91
SPT20YOL148C MIT1P40002 666 aa9.37□□□□□ -0.91
SPT20YOL148C YEN1P40028 759 aa9.37□□□□□ -0.91
SPT20YOL148C GUF1P46943 645 aa9.37□□□□□ -0.91
SPT20YOL148C BPL1P48445 690 aaPredicted RBP9.37□□□□□ -0.91
SPT20YOL148C YGL039WP53183 348 aaKnown RBP9.37□□□□□ -0.91
SPT20YOL148C YGR053CP53234 283 aa9.37□□□□□ -0.91
SPT20YOL148C TOF2Q02208 771 aa9.37□□□□□ -0.91
SPT20YOL148C DLT1Q04216 342 aa9.37□□□□□ -0.91
SPT20YOL148C GAS5Q08193 484 aa9.37□□□□□ -0.91
SPT20YOL148C NRT1Q08485 598 aa9.37□□□□□ -0.91
SPT20YOL148C HUA2Q12134 243 aa9.37□□□□□ -0.91
SPT20YOL148C TSC13Q99190 310 aa9.37□□□□□ -0.91
SPT20YOL148C SUC2P00724 532 aa9.36□□□□□ -0.91
SPT20YOL148C INO1P11986 533 aa9.36□□□□□ -0.91
SPT20YOL148C ATG22P25568 528 aa9.36□□□□□ -0.91
SPT20YOL148C NTG1P31378 399 aa9.36□□□□□ -0.91
SPT20YOL148C MNN5P46982 586 aa9.36□□□□□ -0.91
SPT20YOL148C ZAP1P47043 880 aa9.36□□□□□ -0.91
SPT20YOL148C YNR068CP53754 272 aa9.36□□□□□ -0.91
SPT20YOL148C NPL3Q01560 414 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
SPT20YOL148C SMA1Q02651 245 aa9.36□□□□□ -0.91
SPT20YOL148C PML39Q03760 334 aa9.36□□□□□ -0.91
SPT20YOL148C RAD33Q04231 177 aa9.36□□□□□ -0.91
SPT20YOL148C YLR413WQ06689 675 aa9.36□□□□□ -0.91
SPT20YOL148C SUB2Q07478 446 aaKnown RBP9.36□□□□□ -0.91
SPT20YOL148C HRK1Q08732 759 aaKnown RBP9.36□□□□□ -0.91
SPT20YOL148C FEX1Q08913 375 aa9.36□□□□□ -0.91
SPT20YOL148C RIB3Q99258 208 aa9.36□□□□□ -0.91
SPT20YOL148C FRT1Q99332 602 aa9.36□□□□□ -0.91
SPT20YOL148C GAL10P04397 699 aa9.35□□□□□ -0.91
SPT20YOL148C ARG3P05150 338 aa9.35□□□□□ -0.91
SPT20YOL148C YCR090CP25654 182 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C FUN30P31380 1131 aa9.35□□□□□ -0.91
SPT20YOL148C PHO88P38264 188 aaPredicted RBP9.35□□□□□ -0.91
SPT20YOL148C GRE3P38715 327 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
SPT20YOL148C LYS9P38999 446 aa9.35□□□□□ -0.91
SPT20YOL148C PHM8P40025 321 aa9.35□□□□□ -0.91
SPT20YOL148C YKE4P40544 346 aa9.35□□□□□ -0.91
SPT20YOL148C GCD10P41814 478 aa9.35□□□□□ -0.91
SPT20YOL148C MNN11P46985 422 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C BIO3P50277 480 aa9.35□□□□□ -0.91
SPT20YOL148C RSC4Q02206 625 aa9.35□□□□□ -0.91
SPT20YOL148C BSC2Q05611 235 aa9.35□□□□□ -0.91
SPT20YOL148C VTA1Q06263 330 aa9.35□□□□□ -0.91
SPT20YOL148C DXO1Q06349 442 aa9.35□□□□□ -0.91
SPT20YOL148C YOL019WQ08157 551 aa9.35□□□□□ -0.91
SPT20YOL148C TRE2Q08693 809 aa9.35□□□□□ -0.91
SPT20YOL148C MSC6Q08818 692 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C RBD2Q12270 262 aa9.35□□□□□ -0.91
SPT20YOL148C IPP1P00817 287 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C ATP12P22135 325 aa9.35□□□□□ -0.91
SPT20YOL148C KIN3P22209 435 aa9.35□□□□□ -0.91
SPT20YOL148C PMI40P29952 429 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C THI4P32318 326 aa9.35□□□□□ -0.91
SPT20YOL148C MRPL6P32904 214 aa9.35□□□□□ -0.91
SPT20YOL148C ANR2P36090 516 aaPredicted RBP9.35□□□□□ -0.91
SPT20YOL148C NOP4P37838 685 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C AIM18P38884 321 aa9.35□□□□□ -0.91
SPT20YOL148C GIP4P39732 760 aa9.35□□□□□ -0.91
SPT20YOL148C RPN11P43588 306 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C GCD14P46959 383 aaPredicted RBP9.35□□□□□ -0.91
SPT20YOL148C ALT2P52892 507 aa9.35□□□□□ -0.91
SPT20YOL148C COG1P53079 417 aa9.35□□□□□ -0.91
SPT20YOL148C HER2Q03557 464 aa9.35□□□□□ -0.91
SPT20YOL148C SEG1Q04279 960 aa9.35□□□□□ -0.91
SPT20YOL148C RQC1Q05468 723 aaKnown RBP9.35□□□□□ -0.91
SPT20YOL148C ACF2Q12168 779 aa9.35□□□□□ -0.91
SPT20YOL148C RPN6Q12377 434 aa9.35□□□□□ -0.91
SPT20YOL148C ATP1P07251 545 aaKnown RBP9.34□□□□□ -0.91
SPT20YOL148C FRE2P36033 711 aa9.34□□□□□ -0.91
SPT20YOL148C YAR028WP39548 234 aa9.34□□□□□ -0.91
SPT20YOL148C MPS2P53159 387 aa9.34□□□□□ -0.91
SPT20YOL148C YGR283CP53336 341 aaPredicted RBP9.34□□□□□ -0.91
SPT20YOL148C YNL146WP53906 100 aa9.34□□□□□ -0.91
SPT20YOL148C RPL6AQ02326 176 aaKnown RBP9.34□□□□□ -0.91
SPT20YOL148C YLR455WQ06188 304 aa9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms