RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH2	YOL090W	TDH1	P00360	332 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	ARG80	P07249	177 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	STE14	P32584	239 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	TPO5	P36029	618 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PXL1	P36166	706 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	CCL1	P37366	393 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	TAT1	P38085	619 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	YBR139W	P38109	508 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PFF1	P38244	976 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	TIF5	P38431	405 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	AKR1	P39010	764 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	IMO32	P53219	342 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	DCP2	P53550	970 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	SMA1	Q02651	245 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	REC102	Q02721	264 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PPM1	Q04081	328 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	MRPL1	Q04599	285 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	CRF1	Q04930	467 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	TDA6	Q06466	467 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	GSH2	Q08220	491 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PCL8	Q08966	492 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	RUD3	Q12234	484 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	ERG20	P08524	352 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	PRB1	P09232	635 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PRP6	P19735	899 aa	Predicted RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	KGD1	P20967	1014 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	DPH5	P32469	300 aa	Predicted RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	DOA4	P32571	926 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	SEC31	P38968	1273 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	OYE3	P41816	400 aa	Predicted RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	HXT14	P42833	540 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	CTR1	P49573	406 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	IMD4	P50094	524 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	EGD1	Q02642	157 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	INP2	Q03824	705 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	SIZ1	Q04195	904 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	MCM21	Q06675	368 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	YLR413W	Q06689	675 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	MCA1	Q08601	432 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	PLP2	Q12017	286 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	POM34	Q12445	299 aa		3.17	□□□□□ -1.9
MSH2	YOL090W	ERG27	Q12452	347 aa	Known RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.17	□□□□□ -1.9
MSH2	YOL090W	HIP1	P06775	603 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	GCD1	P09032	578 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	UBA1	P22515	1024 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	YIH1	P25637	258 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	IDH2	P28241	369 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	DCG1	P32460	244 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	SRB5	P32585	307 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	RFC5	P38251	354 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	TOS1	P38288	455 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	SIC1	P38634	284 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	WSS1	P38838	269 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	PEX18	P38855	283 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	ALD5	P40047	520 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	IAH1	P41734	238 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	PAN2	P53010	1115 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	MRPS35	P53292	345 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	UTP6	Q02354	440 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	INA17	Q02888	182 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	ACL4	Q03771	387 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	HOF1	Q05080	669 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	ULA1	Q12059	462 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	VPS63	O13549	108 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	CBP2	P03874	630 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	SUP35	P05453	685 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	RPL6B	P05739	176 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	RPS9B	P05755	195 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	STE3	P06783	470 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	YSP3	P25036	478 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	LRE1	P25579	583 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	YCR061W	P25639	631 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	MSN4	P33749	630 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	YBL055C	P34220	418 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	PZF1	P39933	429 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	AIM10	P39965	576 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	SWP82	P43554	623 aa		3.16	□□□□□ -1.9
MSH2	YOL090W	LOC1	P43586	204 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	GCD14	P46959	383 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	RPL6A	Q02326	176 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	SLU7	Q02775	382 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	MTG1	Q03151	367 aa	Predicted RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	HBT1	Q07653	1046 aa	Known RBP	3.16	□□□□□ -1.9
MSH2	YOL090W	YCR015C	P25616	317 aa		3.15	□□□□□ -1.9
MSH2	YOL090W	ASF2	P32448	525 aa	Predicted RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	LIN1	P38852	340 aa	Predicted RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	MNN9	P39107	395 aa	Known RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	PNC1	P53184	216 aa	Known RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	COX18	P53239	316 aa		3.15	□□□□□ -1.9
MSH2	YOL090W	REX2	P54964	269 aa	Known RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	CLU1	Q03690	1277 aa	Known RBP	3.15	□□□□□ -1.9
MSH2	YOL090W	BUG1	Q12191	341 aa		3.15	□□□□□ -1.9
MSH2	YOL090W	PRP2	P20095	876 aa	Predicted RBP	3.15	□□□□□ -1.91
MSH2	YOL090W	SMY1	P32364	656 aa	Known RBP	3.15	□□□□□ -1.91
MSH2	YOL090W	KRE6	P32486	720 aa		3.15	□□□□□ -1.91
MSH2	YOL090W	MRPL4	P36517	319 aa		3.15	□□□□□ -1.91
MSH2	YOL090W	SCC4	P40090	624 aa		3.15	□□□□□ -1.91
MSH2	YOL090W	YTA12	P40341	825 aa		3.15	□□□□□ -1.91
MSH2	YOL090W	YIL077C	P40508	320 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms