RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	RPS7B	P48164	190 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	YGL082W	P53155	381 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	EMI2	Q04409	500 aa	Known RBP	2.81	□□□□□ -1.96
RIO2	YNL207W	YDL218W	Q07629	317 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	CDC45	Q08032	650 aa		2.81	□□□□□ -1.96
RIO2	YNL207W	SEM1	O94742	89 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	PMS1	P14242	873 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	GLN3	P18494	730 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	PEP3	P27801	918 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	MUD2	P36084	527 aa	Known RBP	2.8	□□□□□ -1.96
RIO2	YNL207W	RIM2	P38127	377 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	YER130C	P39959	443 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	RMD8	P43620	662 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	SGM1	P47166	707 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	INN1	P53901	409 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	YSA1	Q01976	231 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	YML037C	Q03703	340 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	TMA64	Q04600	565 aa	Known RBP	2.8	□□□□□ -1.96
RIO2	YNL207W	DPB4	Q04603	196 aa	Known RBP	2.8	□□□□□ -1.96
RIO2	YNL207W	SCW10	Q04951	389 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	ECM30	Q06673	1274 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	BUD21	Q08492	214 aa	Predicted RBP	2.8	□□□□□ -1.96
RIO2	YNL207W	FMP40	Q08968	688 aa	Predicted RBP	2.8	□□□□□ -1.96
RIO2	YNL207W	RCN2	Q12044	265 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	DAP1	Q12091	152 aa		2.8	□□□□□ -1.96
RIO2	YNL207W	MF(ALPHA)1	P01149	165 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	YCK1	P23291	538 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	SPC34	P36131	295 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	ELO1	P39540	310 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	AZF1	P41696	914 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	VID30	P53076	958 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	DUO1	P53168	247 aa	Known RBP	2.79	□□□□□ -1.96
RIO2	YNL207W	ERG26	P53199	349 aa	Known RBP	2.79	□□□□□ -1.96
RIO2	YNL207W	ATG26	Q06321	1198 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	VIP1	Q06685	1146 aa	Known RBP	2.79	□□□□□ -1.96
RIO2	YNL207W	RDR1	Q08904	546 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	YDR056C	Q12025	205 aa		2.79	□□□□□ -1.96
RIO2	YNL207W	YML002W	P0CF17	737 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	RPL19A	P0CX82	189 aa	Known RBP	2.78	□□□□□ -1.96
RIO2	YNL207W	RPL19B	P0CX83	189 aa	Predicted RBP	2.78	□□□□□ -1.96
RIO2	YNL207W	MRS3	P10566	314 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	PWP1	P21304	576 aa	Known RBP	2.78	□□□□□ -1.96
RIO2	YNL207W	BOS1	P25385	244 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	PGS1	P25578	521 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	CMK1	P27466	446 aa	Known RBP	2.78	□□□□□ -1.96
RIO2	YNL207W	YKL100C	P34248	587 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	MIC60	P36112	540 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	ROT2	P38138	954 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	REG2	P38232	338 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	TSC10	P38342	320 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	KRE9	P39005	276 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	FLC2	P39719	783 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	FMP10	P40098	244 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	RGI2	P40188	164 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	YGR066C	P53242	292 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	CRZ1	P53968	678 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	YMR160W	Q03823	816 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	TEN1	Q07921	160 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	TIP41	Q12199	356 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	CSR2	Q12734	1121 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	YBR298C-A	Q8TGK4	73 aa		2.78	□□□□□ -1.96
RIO2	YNL207W	GCN4	P03069	281 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	ARD1	P07347	238 aa	Predicted RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	AAC3	P18238	307 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	SAN1	P22470	610 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	POL4	P25615	582 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	IMG1	P25626	169 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	SSE2	P32590	693 aa	Known RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	TRS65	P32893	560 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	LOS1	P33418	1100 aa	Predicted RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	SEF1	P34228	1148 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	ERG7	P38604	731 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	UBA4	P38820	440 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	DHH1	P39517	506 aa	Known RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	DUG3	P53871	357 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	IMP4	P53941	290 aa	Known RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	RPT6	Q01939	405 aa	Known RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	TSR2	Q06672	205 aa	Known RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	SSK1	Q07084	712 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	LUC7	Q07508	261 aa	Predicted RBP	2.77	□□□□□ -1.97
RIO2	YNL207W	GRC3	Q07845	632 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	SDH5	Q08230	162 aa		2.77	□□□□□ -1.97
RIO2	YNL207W	PRP16	P15938	1071 aa	Predicted RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	PDA1	P16387	420 aa	Known RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	MCM4	P30665	933 aa	Known RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	SNC1	P31109	117 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	IMP2'	P32351	346 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	ERG1	P32476	496 aa	Known RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	RPN12	P32496	274 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	YOX1	P34161	385 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	YBR144C	P34215	104 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	ANS1	P38832	159 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	ALG5	P40350	334 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	ARF3	P40994	183 aa	RIP-Chip data	2.76	□□□□□ -1.97	not detected
RIO2	YNL207W	RBG2	P53295	368 aa	Known RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	SOL4	P53315	255 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	EFM6	P53970	246 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	RSM23	Q01163	450 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	YVH1	Q02256	364 aa	Known RBP	2.76	□□□□□ -1.97
RIO2	YNL207W	RTT109	Q07794	436 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms