RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	CAF120	P53836	1060 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	MHR1	Q06630	226 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	THI73	Q07904	523 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	NSL1	Q12143	216 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	CHC1	P22137	1653 aa	Known RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	MEI5	P32489	222 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	SIP1	P32578	815 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	CWC27	Q02770	301 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	AIM36	Q03798	255 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	APC4	Q04601	652 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	REX3	Q12090	404 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	RAD59	Q12223	238 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	PHM7	Q12252	991 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	PUT2	P07275	575 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	COS2	P0CX12	379 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	COS3	P0CX13	379 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	CIN8	P27895	1000 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	ABD1	P32783	436 aa	Predicted RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	ECM27	P47144	725 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	PPT1	P53043	513 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	TPN1	P53099	579 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	TFC6	Q06339	672 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	MSS18	P08593	268 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	CHS2	P14180	963 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	RRP3	P38712	501 aa	Known RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	QNS1	P38795	714 aa	Known RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	TPA1	P40032	644 aa	Known RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	CRR1	Q05790	422 aa		4.16	□□□□□ -1.74
SEN1	YLR430W	ECM38	Q05902	660 aa	Predicted RBP	4.16	□□□□□ -1.74
SEN1	YLR430W	ARG3	P05150	338 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	MIP1	P15801	1254 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	PTC7	P38797	343 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	GIP4	P39732	760 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	ASG1	P40467	964 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	ABM1	P47146	123 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	YNL010W	P53981	241 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	YCL001W-A	P87012	153 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	YML131W	Q03102	365 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	TVP15	Q03860	143 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	RUB1	Q03919	77 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	DPB4	Q04603	196 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	BCH1	Q05029	724 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
SEN1	YLR430W	AKR2	Q12013	749 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	CAR1	P00812	333 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	RHO1	P06780	209 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	AMS1	P22855	1083 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	APE2	P32454	952 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	TOD6	P34219	525 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	YBR056W	P38081	501 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	GPX2	P38143	162 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	FHL1	P39521	936 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	SER2	P42941	309 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	RGD2	P43556	714 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	RTT101	P47050	842 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	YNR062C	P53748	327 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	IRC4	Q03036	179 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	CSN9	Q03981	162 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	NEJ1	Q06148	342 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	CDC73	Q06697	393 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	HSH49	Q99181	213 aa	Predicted RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	GUT2	P32191	649 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	MUD1	P32605	298 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	HSE1	P38753	452 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	ALR2	P43553	858 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	CAF16	P43569	289 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	SAE2	P46946	345 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	YLR283W	Q05867	314 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	ATP14	Q12349	124 aa		4.15	□□□□□ -1.74
SEN1	YLR430W	PAA1	Q12447	191 aa	Known RBP	4.15	□□□□□ -1.74
SEN1	YLR430W	ATP4	P05626	244 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	SIR1	P21691	654 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	RPL24B	P24000	155 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	FUN26	P31381	517 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	GLO3	P38682	493 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	BIG1	P38813	335 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YHR131C	P38835	850 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	MNN1	P39106	762 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YER184C	P39961	794 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YNL146W	P53906	100 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YPL107W	Q02873	248 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	PRM15	Q03262	622 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	ATG20	Q07528	640 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YDL206W	Q12424	762 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	RPP2B	P02400	110 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	SEC53	P07283	254 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	MIS1	P09440	975 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	APA1	P16550	321 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	SIT4	P20604	311 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	CHL1	P22516	861 aa	Predicted RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	CAP1	P28495	268 aa	Known RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	CHS3	P29465	1165 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	PET127	P32606	800 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	SRP102	P36057	244 aa	Predicted RBP	4.15	□□□□□ -1.75
SEN1	YLR430W	PEX32	P38292	413 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	LYS9	P38999	446 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	SWM2	P40342	146 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	MOG1	P47123	218 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms